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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.302292 (92 seq.)
>W1710923923
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
262868
262943
+
Asn
GTT
[ENA]
¡û
>W1710923924
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263076
263151
+
Asn
GTT
[ENA]
¡û
>W1710923925
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263199
263274
+
Asn
GTT
[ENA]
¡û
>W1710923926
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263322
263397
+
Asn
GTT
[ENA]
¡û
>W1710923927
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263445
263520
+
Asn
GTT
[ENA]
¡û
>W1710923928
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263606
263681
+
Asn
GTT
[ENA]
¡û
>W1710923955
LOCN01000011
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
31967
32042
+
Asn
GTT
[ENA]
¡û
>W131179772
ARMR01000028
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
32507
32582
+
Asn
GTT
[ENA]
¡û
>W131179789
ARMR01000039
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
89972
89897
-
Asn
GTT
[ENA]
¡û
>W131179816
ARMR01000055
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
7
82
+
Asn
GTT
[ENA]
¡û
>w027921
ABCQ01000012
Gammaproteobacteria
Moritella sp. PE36 [ABCQ]
100979
100902
-
Asn
GTT
[ENA]
¡û
>WENV181316906
OFJV01020852
[OFJV] marine metagenome; seawater
175
250
+
Asn
GTT
[ENA]
¢þ
>WENV183618195
OOFN01004411
[OOFN] marine metagenome; seawater
535
610
+
Asn
GTT
[ENA]
¢þ
>C181204174
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
1458200
1458275
+
Asn
GTT
-
¡û
>C181204175
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
1458408
1458483
+
Asn
GTT
-
¡û
>C181204176
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
1458574
1458649
+
Asn
GTT
-
¡û
>C181204177
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
1458755
1458830
+
Asn
GTT
-
¡û
>C181204178
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
1458936
1459011
+
Asn
GTT
-
¡û
>C181204216
LS483250
Gammaproteobacteria
Moritella yayanosii DB21MT 5 [LS483250]
3468303
3468228
-
Asn
GTT
-
¡û
>W1910237508
FPLD01000066
Gammaproteobacteria
Moritella viscosa [FPLD]
28
103
+
Asn
GTT
[ENA]
¡û
>W1910237539
FPLD01000092
Gammaproteobacteria
Moritella viscosa [FPLD]
6064
5989
-
Asn
GTT
[ENA]
¡û
>W1910237540
FPLD01000092
Gammaproteobacteria
Moritella viscosa [FPLD]
5879
5804
-
Asn
GTT
[ENA]
¡û
>W1910237541
FPLD01000092
Gammaproteobacteria
Moritella viscosa [FPLD]
5694
5619
-
Asn
GTT
[ENA]
¡û
>W1910237542
FPLD01000093
Gammaproteobacteria
Moritella viscosa [FPLD]
742
667
-
Asn
GTT
[ENA]
¡û
>W1910237543
FPLD01000093
Gammaproteobacteria
Moritella viscosa [FPLD]
548
473
-
Asn
GTT
[ENA]
¡û
>W1910237544
FPLD01000093
Gammaproteobacteria
Moritella viscosa [FPLD]
339
264
-
Asn
GTT
[ENA]
¡û
>W1910237545
FPLD01000093
Gammaproteobacteria
Moritella viscosa [FPLD]
154
79
-
Asn
GTT
[ENA]
¡û
>W1910237546
FPLD01000094
Gammaproteobacteria
Moritella viscosa [FPLD]
427
352
-
Asn
GTT
[ENA]
¡û
>W1910237547
FPLD01000094
Gammaproteobacteria
Moritella viscosa [FPLD]
242
167
-
Asn
GTT
[ENA]
¡û
>W1910237587
FPLE01000075
Gammaproteobacteria
Moritella viscosa [FPLE]
27
102
+
Asn
GTT
[ENA]
¡û
>W1910237622
FPLE01000131
Gammaproteobacteria
Moritella viscosa [FPLE]
68
143
+
Asn
GTT
[ENA]
¡û
>W1910237623
FPLE01000155
Gammaproteobacteria
Moritella viscosa [FPLE]
11267
11342
+
Asn
GTT
[ENA]
¡û
>W1910237625
FPLE01000157
Gammaproteobacteria
Moritella viscosa [FPLE]
150
225
+
Asn
GTT
[ENA]
¡û
>W1910237626
FPLE01000157
Gammaproteobacteria
Moritella viscosa [FPLE]
335
410
+
Asn
GTT
[ENA]
¡û
>W1910237627
FPLE01000157
Gammaproteobacteria
Moritella viscosa [FPLE]
520
595
+
Asn
GTT
[ENA]
¡û
>W1910237666
FPLF01000077
Gammaproteobacteria
Moritella viscosa [FPLF]
27
102
+
Asn
GTT
[ENA]
¡û
>W1910237687
FPLF01000106
Gammaproteobacteria
Moritella viscosa [FPLF]
203
128
-
Asn
GTT
[ENA]
¡û
>W1910237727
FPLG01000088
Gammaproteobacteria
Moritella viscosa [FPLG]
25
100
+
Asn
GTT
[ENA]
¡û
>W1910237753
FPLG01000106
Gammaproteobacteria
Moritella viscosa [FPLG]
755
680
-
Asn
GTT
[ENA]
¡û
>W1910237754
FPLG01000106
Gammaproteobacteria
Moritella viscosa [FPLG]
570
495
-
Asn
GTT
[ENA]
¡û
>W1910237755
FPLG01000106
Gammaproteobacteria
Moritella viscosa [FPLG]
361
286
-
Asn
GTT
[ENA]
¡û
>W1910237756
FPLG01000106
Gammaproteobacteria
Moritella viscosa [FPLG]
152
77
-
Asn
GTT
[ENA]
¡û
>W1910237912
FPLJ01000052
Gammaproteobacteria
Moritella viscosa [FPLJ]
160348
160423
+
Asn
GTT
[ENA]
¡û
>W1910237948
FPLJ01000070
Gammaproteobacteria
Moritella viscosa [FPLJ]
5621
5546
-
Asn
GTT
[ENA]
¡û
>W1910237949
FPLJ01000071
Gammaproteobacteria
Moritella viscosa [FPLJ]
615
540
-
Asn
GTT
[ENA]
¡û
>W1910237950
FPLJ01000071
Gammaproteobacteria
Moritella viscosa [FPLJ]
430
355
-
Asn
GTT
[ENA]
¡û
>W1910237951
FPLJ01000071
Gammaproteobacteria
Moritella viscosa [FPLJ]
221
146
-
Asn
GTT
[ENA]
¡û
>W1910282734
FRDQ01000069
Gammaproteobacteria
Moritella viscosa [FRDQ]
15053
15128
+
Asn
GTT
[ENA]
¡û
>W1910282763
FRDQ01000095
Gammaproteobacteria
Moritella viscosa [FRDQ]
5628
5553
-
Asn
GTT
[ENA]
¡û
>W1910282764
FRDQ01000096
Gammaproteobacteria
Moritella viscosa [FRDQ]
284
209
-
Asn
GTT
[ENA]
¡û
>W1910282765
FRDQ01000096
Gammaproteobacteria
Moritella viscosa [FRDQ]
99
24
-
Asn
GTT
[ENA]
¡û
>W1910282802
FRDR01000089
Gammaproteobacteria
Moritella viscosa [FRDR]
25
100
+
Asn
GTT
[ENA]
¡û
>W1910282836
FRDR01000122
Gammaproteobacteria
Moritella viscosa [FRDR]
176
101
-
Asn
GTT
[ENA]
¡û
>W1910282880
FRDS01000083
Gammaproteobacteria
Moritella viscosa [FRDS]
15052
15127
+
Asn
GTT
[ENA]
¡û
>W1910282905
FRDS01000114
Gammaproteobacteria
Moritella viscosa [FRDS]
119
44
-
Asn
GTT
[ENA]
¡û
>W1910282953
FRDT01000068
Gammaproteobacteria
Moritella viscosa [FRDT]
15257
15332
+
Asn
GTT
[ENA]
¡û
>W1910282983
FRDT01000099
Gammaproteobacteria
Moritella viscosa [FRDT]
6159
6084
-
Asn
GTT
[ENA]
¡û
>W1910282984
FRDT01000099
Gammaproteobacteria
Moritella viscosa [FRDT]
5965
5890
-
Asn
GTT
[ENA]
¡û
>W1910282985
FRDT01000099
Gammaproteobacteria
Moritella viscosa [FRDT]
5756
5681
-
Asn
GTT
[ENA]
¡û
>W1910282986
FRDT01000099
Gammaproteobacteria
Moritella viscosa [FRDT]
5571
5496
-
Asn
GTT
[ENA]
¡û
>W1910282987
FRDT01000100
Gammaproteobacteria
Moritella viscosa [FRDT]
188
113
-
Asn
GTT
[ENA]
¡û
>W1910283034
FRDU01000084
Gammaproteobacteria
Moritella viscosa [FRDU]
27
102
+
Asn
GTT
[ENA]
¡û
>W1910283061
FRDU01000110
Gammaproteobacteria
Moritella viscosa [FRDU]
160
85
-
Asn
GTT
[ENA]
¡û
>W1910283110
FRDV01000094
Gammaproteobacteria
Moritella viscosa [FRDV]
99997
100072
+
Asn
GTT
[ENA]
¡û
>W1910283144
FRDV01000135
Gammaproteobacteria
Moritella viscosa [FRDV]
76
1
-
Asn
GTT
[ENA]
¡û
>W1910283189
FRDW01000046
Gammaproteobacteria
Moritella viscosa [FRDW]
148575
148650
+
Asn
GTT
[ENA]
¡û
>W1910283220
FRDW01000063
Gammaproteobacteria
Moritella viscosa [FRDW]
616
541
-
Asn
GTT
[ENA]
¡û
>W1910283221
FRDW01000063
Gammaproteobacteria
Moritella viscosa [FRDW]
431
356
-
Asn
GTT
[ENA]
¡û
>W1910283222
FRDW01000063
Gammaproteobacteria
Moritella viscosa [FRDW]
222
147
-
Asn
GTT
[ENA]
¡û
>W1810157542
PJCA01000027
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
707171
707096
-
Asn
GTT
[ENA]
¡û
>W1810157557
PJCA01000029
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
132289
132364
+
Asn
GTT
[ENA]
¡û
>W1810157617
PJCA01000039
Gammaproteobacteria
Moritella sp. Urea-trap-13 [PJCA]
170144
170219
+
Asn
GTT
[ENA]
¡û
>C151103108
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
3241083
3241158
+
Asn
GTT
[Ensembl]
¡û
>C151103109
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
3241277
3241352
+
Asn
GTT
[Ensembl]
¡û
>C151103110
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
3241471
3241546
+
Asn
GTT
[Ensembl]
¡û
>C151103111
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
3241707
3241782
+
Asn
GTT
[Ensembl]
¡û
>C151103112
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
3241892
3241967
+
Asn
GTT
[Ensembl]
¡û
>C151103129
LN554852
Gammaproteobacteria
Moritella viscosa [LN554852]
4718975
4719050
+
Asn
GTT
[Ensembl]
¡û
>W121102684
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
6259
6184
-
Asn
GTT
[ENA]
¡û
>W121102663
AKXQ01000011
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
179098
179023
-
Asn
GTT
[ENA]
¡û
>W121102680
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
6988
6913
-
Asn
GTT
[ENA]
¡û
>W121102683
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
6395
6320
-
Asn
GTT
[ENA]
¡û
>W121102685
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
6123
6048
-
Asn
GTT
[ENA]
¡û
>W121102687
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
5854
5779
-
Asn
GTT
[ENA]
¡û
>W121102689
AKXQ01000014
Gammaproteobacteria
Moritella dasanensis ArB 0140 [AKXQ]
5525
5450
-
Asn
GTT
[ENA]
¡û
>W1610781524
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
262868
262943
+
Asn
GTT
[ENA]
¡û
>W1610781525
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263076
263151
+
Asn
GTT
[ENA]
¡û
>W1610781526
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263199
263274
+
Asn
GTT
[ENA]
¡û
>W1610781527
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263322
263397
+
Asn
GTT
[ENA]
¡û
>W1610781528
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263445
263520
+
Asn
GTT
[ENA]
¡û
>W1610781529
LOCN01000006
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
263606
263681
+
Asn
GTT
[ENA]
¡û
>W1610781556
LOCN01000011
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
31967
32042
+
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK