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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.307597 (279 seq.)
>W1711107402
LTST01000052
Betaproteobacteria
Eikenella sp. HMSC073A11 [LTST]
3622
3697
+
Asn
GTT
[ENA]
¡û
>WENV180135146
OATK01007679
[OATK] human gut metagenome; faeces
1304
1229
-
Asn
GTT
[ENA]
¢þ
>WENV180152662
OAUQ01018591
[OAUQ] human gut metagenome; faeces
474
399
-
Asn
GTT
[ENA]
¢þ
>WENV180164001
OAVI01019397
[OAVI] human gut metagenome; faeces
169
94
-
Asn
GTT
[ENA]
¢þ
>WENV180169039
OAVS01000576
[OAVS] human gut metagenome; faeces
20280
20355
+
Asn
GTT
[ENA]
¢þ
>WENV180186077
OAWU01001461
[OAWU] human gut metagenome; faeces
2812
2887
+
Asn
GTT
[ENA]
¢þ
>WENV180189690
OAWY01001061
[OAWY] human gut metagenome; faeces
12108
12183
+
Asn
GTT
[ENA]
¢þ
>WENV180195062
OAZY01001005
[OAZY] human gut metagenome; faeces
10661
10736
+
Asn
GTT
[ENA]
¢þ
>WENV180278957
OBHX01011687
[OBHX] metagenome; feces
2041
2116
+
Asn
GTT
[ENA]
¢þ
>WENV180278958
OBHX01011687
[OBHX] metagenome; feces
2159
2234
+
Asn
GTT
[ENA]
¢þ
>WENV180278959
OBHX01011687
[OBHX] metagenome; feces
2277
2352
+
Asn
GTT
[ENA]
¢þ
>WENV180400492
OBRI01000718
[OBRI] human gut metagenome; ENVO:feces
190
115
-
Asn
GTT
[ENA]
¢þ
>WENV180400819
OBRJ01000105
[OBRJ] human gut metagenome; ENVO:feces
190
115
-
Asn
GTT
[ENA]
¢þ
>WENV180428627
OBWC01000921
[OBWC] human gut metagenome; faeces
1576
1501
-
Asn
GTT
[ENA]
¢þ
>WENV180438776
OBWS01000836
[OBWS] human gut metagenome; faeces
15565
15640
+
Asn
GTT
[ENA]
¢þ
>WENV180445475
OBXA01005802
[OBXA] human gut metagenome; faeces
2368
2443
+
Asn
GTT
[ENA]
¢þ
>WENV180445476
OBXA01005802
[OBXA] human gut metagenome; faeces
2482
2557
+
Asn
GTT
[ENA]
¢þ
>WENV180467518
OBYI01000482
[OBYI] human gut metagenome; faeces
892
817
-
Asn
GTT
[ENA]
¢þ
>WENV180469152
OBYM01000679
[OBYM] human gut metagenome; faeces
15639
15714
+
Asn
GTT
[ENA]
¢þ
>WENV180493689
OBZZ01000181
[OBZZ] human gut metagenome; faeces
1613
1538
-
Asn
GTT
[ENA]
¢þ
>WENV180494753
OCAA01001009
[OCAA] human gut metagenome; faeces
1597
1522
-
Asn
GTT
[ENA]
¢þ
>WENV180500044
OCAI01001445
[OCAI] human gut metagenome; faeces
9605
9680
+
Asn
GTT
[ENA]
¢þ
>WENV180501593
OCAK01002377
[OCAK] human gut metagenome; faeces
6228
6303
+
Asn
GTT
[ENA]
¢þ
>WENV180521850
OCHF01087761
[OCHF] human gut metagenome; human gut
303
228
-
Asn
GTT
[ENA]
¢þ
>WENV180572168
OCLU01017444
[OCLU] human gut metagenome; human gut
1291
1366
+
Asn
GTT
[ENA]
¢þ
>WENV180575606
OCLY01000732
[OCLY] human gut metagenome; human gut
10281
10356
+
Asn
GTT
[ENA]
¢þ
>WENV180642425
OCRP01000130
[OCRP] human gut metagenome; human gut
87870
87945
+
Asn
GTT
[ENA]
¢þ
>WENV180703616
ODEI01001760
[ODEI] human metagenome; G_DNA_Stool
11916
11991
+
Asn
GTT
[ENA]
¢þ
>WENV180818268
ODJQ01014334
[ODJQ] human metagenome; G_DNA_Stool
1091
1166
+
Asn
GTT
[ENA]
¢þ
>WENV180833983
ODKD01001549
[ODKD] human metagenome; G_DNA_Supragingival plaque
3646
3721
+
Asn
GTT
[ENA]
¢þ
>WENV180834037
ODKD01002130
[ODKD] human metagenome; G_DNA_Supragingival plaque
4269
4194
-
Asn
GTT
[ENA]
¢þ
>WENV180848240
ODKU01000106
[ODKU] human metagenome; G_DNA_Stool
1494
1419
-
Asn
GTT
[ENA]
¢þ
>WENV180889218
ODMN01019340
[ODMN] human metagenome; G_DNA_Supragingival plaque
569
644
+
Asn
GTT
[ENA]
¢þ
>WENV180904852
ODPF01001750
[ODPF] human metagenome; G_DNA_Stool
14518
14593
+
Asn
GTT
[ENA]
¢þ
>WENV180971889
ODUU01130341
[ODUU] human metagenome; G_DNA_Stool
190
115
-
Asn
GTT
[ENA]
¢þ
>WENV181011759
ODWI01115869
[ODWI] human metagenome; G_DNA_Tongue dorsum
155
80
-
Asn
GTT
[ENA]
¢þ
>WENV181019048
ODWU01000447
[ODWU] human metagenome; G_DNA_Supragingival plaque
15809
15882
+
Asn
GTT
[ENA]
¢þ
>WENV181019372
ODWU01002384
[ODWU] human metagenome; G_DNA_Supragingival plaque
473
546
+
Asn
GTT
[ENA]
¢þ
>WENV181076256
OEAP01003057
[OEAP] human metagenome; G_DNA_Supragingival plaque
2731
2806
+
Asn
GTT
[ENA]
¢þ
>WENV181089583
OEBA01049259
[OEBA] human metagenome; G_DNA_Stool
513
438
-
Asn
GTT
[ENA]
¢þ
>WENV181093466
OEBW01001233
[OEBW] human metagenome; G_DNA_Stool
11441
11516
+
Asn
GTT
[ENA]
¢þ
>WENV181098206
OECA01138398
[OECA] human metagenome; G_DNA_Tongue dorsum
162
236
+
Asn
GTT
[ENA]
¢þ
>WENV181128163
OEFW01045292
[OEFW] human metagenome; G_DNA_Stool
469
394
-
Asn
GTT
[ENA]
¢þ
>WENV181137469
OEGJ01004553
[OEGJ] human metagenome; G_DNA_Supragingival plaque
3912
3987
+
Asn
GTT
[ENA]
¢þ
>WENV181138019
OEGJ01078010
[OEGJ] human metagenome; G_DNA_Supragingival plaque
269
344
+
Asn
GTT
[ENA]
¢þ
>WENV181154094
OEIC01000465
[OEIC] human metagenome; G_DNA_Stool
1979
1904
-
Asn
GTT
[ENA]
¢þ
>WENV181154095
OEIC01000465
[OEIC] human metagenome; G_DNA_Stool
1861
1786
-
Asn
GTT
[ENA]
¢þ
>WENV181222323
OFDA01000603
[OFDA] metagenome; Human gut stool
8593
8668
+
Asn
GTT
[ENA]
¢þ
>WENV181420490
OGCN01003000
[OGCN] human gut metagenome; human gut
15564
15639
+
Asn
GTT
[ENA]
¢þ
>WENV181442778
OGDP01000025
[OGDP] metagenome; Human gut stool
5006
4931
-
Asn
GTT
[ENA]
¢þ
>WENV181444002
OGDQ01003294
[OGDQ] metagenome; Human gut stool
190
115
-
Asn
GTT
[ENA]
¢þ
>WENV181511633
OGGS01004354
[OGGS] metagenome; Human gut stool
1238
1163
-
Asn
GTT
[ENA]
¢þ
>WENV181527685
OGHK01005341
[OGHK] metagenome; Human gut stool
4421
4496
+
Asn
GTT
[ENA]
¢þ
>WENV181559395
OGIZ01000985
[OGIZ] metagenome; Human gut stool
12710
12785
+
Asn
GTT
[ENA]
¢þ
>WENV181585640
OGKF01019609
[OGKF] metagenome; Human gut stool
731
806
+
Asn
GTT
[ENA]
¢þ
>WENV181621801
OGMF01016198
[OGMF] metagenome; Human gut stool
527
452
-
Asn
GTT
[ENA]
¢þ
>WENV181648385
OGNQ01024174
[OGNQ] metagenome; Human gut stool
289
214
-
Asn
GTT
[ENA]
¢þ
>WENV181656453
OGOC01000545
[OGOC] human gut metagenome; faeces
32975
33050
+
Asn
GTT
[ENA]
¢þ
>WENV181684916
OGOV01042081
[OGOV] human gut metagenome; faeces
931
1006
+
Asn
GTT
[ENA]
¢þ
>WENV181692184
OGOZ01081701
[OGOZ] human gut metagenome; faeces
466
391
-
Asn
GTT
[ENA]
¢þ
>WENV181704875
OGPK01001365
[OGPK] human gut metagenome; faeces
10829
10904
+
Asn
GTT
[ENA]
¢þ
>WENV181707462
OGPL01026531
[OGPL] human gut metagenome; faeces
801
876
+
Asn
GTT
[ENA]
¢þ
>WENV181710992
OGPO01004824
[OGPO] human gut metagenome; faeces
1268
1193
-
Asn
GTT
[ENA]
¢þ
>WENV181711989
OGPP01002485
[OGPP] human gut metagenome; faeces
9408
9483
+
Asn
GTT
[ENA]
¢þ
>WENV181722407
OGPV01060002
[OGPV] human gut metagenome; faeces
487
412
-
Asn
GTT
[ENA]
¢þ
>WENV181733381
OGQE01002308
[OGQE] human gut metagenome; faeces
14523
14598
+
Asn
GTT
[ENA]
¢þ
>WENV181736787
OGQH01001816
[OGQH] human gut metagenome; faeces
15535
15610
+
Asn
GTT
[ENA]
¢þ
>WENV181761841
OGQW01009615
[OGQW] human gut metagenome; faeces
511
436
-
Asn
GTT
[ENA]
¢þ
>WENV181763822
OGQX01015924
[OGQX] human gut metagenome; faeces
2158
2083
-
Asn
GTT
[ENA]
¢þ
>WENV181768352
OGRA01001505
[OGRA] human gut metagenome; faeces
20270
20345
+
Asn
GTT
[ENA]
¢þ
>WENV181773938
OGRE01003043
[OGRE] human gut metagenome; faeces
1368
1293
-
Asn
GTT
[ENA]
¢þ
>WENV181783235
OGRL01001482
[OGRL] human gut metagenome; faeces
1457
1382
-
Asn
GTT
[ENA]
¢þ
>WENV181791084
OGRP01006726
[OGRP] human gut metagenome; faeces
1020
1095
+
Asn
GTT
[ENA]
¢þ
>WENV181931417
OGYQ01000386
[OGYQ] human gut metagenome; faeces
326
251
-
Asn
GTT
[ENA]
¢þ
>WENV182099694
OHHR01009770
[OHHR] human gut metagenome; feces
334
259
-
Asn
GTT
[ENA]
¢þ
>WENV182131683
OHKD01002189
[OHKD] human gut metagenome; feces
4914
4989
+
Asn
GTT
[ENA]
¢þ
>WENV182194661
OHPC01007739
[OHPC] human gut metagenome; feces
918
843
-
Asn
GTT
[ENA]
¢þ
>WENV182275568
OHUN01001432
[OHUN] human gut metagenome; feces
4896
4821
-
Asn
GTT
[ENA]
¢þ
>WENV182407116
OIFB01009766
[OIFB] human gut metagenome; human gut
358
283
-
Asn
GTT
[ENA]
¢þ
>W141251909
CBQY010000203
Betaproteobacteria
Kingella kingae AA417 [CBQY]
21961
22036
+
Asn
GTT
[ENA]
¡û
>W141252144
CBRD010000353
Betaproteobacteria
Kingella kingae BB114 [CBRD]
21961
22036
+
Asn
GTT
[ENA]
¡û
>W141253118
CBSA010000041
Betaproteobacteria
Kingella kingae KK3 [CBSA]
12272
12347
+
Asn
GTT
[ENA]
¡û
>W141253150
CBSA010001059
Betaproteobacteria
Kingella kingae KK3 [CBSA]
21948
22023
+
Asn
GTT
[ENA]
¡û
>W141253347
CBSF010000005
Betaproteobacteria
Kingella kingae KK12 [CBSF]
12933
13008
+
Asn
GTT
[ENA]
¡û
>W141253379
CBSF010000126
Betaproteobacteria
Kingella kingae KK12 [CBSF]
21960
22035
+
Asn
GTT
[ENA]
¡û
>W141253748
CBSN010000225
Betaproteobacteria
Kingella kingae KK107 [CBSN]
21961
22036
+
Asn
GTT
[ENA]
¡û
>W141253837
CBSP010000531
Betaproteobacteria
Kingella kingae PV1748 [CBSP]
21961
22036
+
Asn
GTT
[ENA]
¡û
>W141253851
CBSQ010000021
Betaproteobacteria
Kingella kingae Vir5453 [CBSQ]
12300
12375
+
Asn
GTT
[ENA]
¡û
>W141253883
CBSQ010000468
Betaproteobacteria
Kingella kingae Vir5453 [CBSQ]
21961
22036
+
Asn
GTT
[ENA]
¡û
>W141254737
CBTG010000291
Betaproteobacteria
Kingella kingae KK411 [CBTG]
21959
22034
+
Asn
GTT
[ENA]
¡û
>WENV182601742
OJJJ01000376
[OJJJ] metagenome; faeces
1670
1595
-
Asn
GTT
[ENA]
¢þ
>WENV182615737
OJKC01007114
[OJKC] metagenome; faeces
4222
4297
+
Asn
GTT
[ENA]
¢þ
>WENV182654161
OJMI01001777
[OJMI] human gut metagenome; feces
19936
20011
+
Asn
GTT
[ENA]
¢þ
>WENV182698071
OJOM01000255
[OJOM] human gut metagenome; stool sample
30291
30366
+
Asn
GTT
[ENA]
¢þ
>WENV182698072
OJOM01000255
[OJOM] human gut metagenome; stool sample
30409
30484
+
Asn
GTT
[ENA]
¢þ
>WENV182698126
OJOM01000563
[OJOM] human gut metagenome; stool sample
17908
17983
+
Asn
GTT
[ENA]
¢þ
>WENV182698448
OJOM01007373
[OJOM] human gut metagenome; stool sample
4
79
+
Asn
GTT
[ENA]
¢þ
>WENV182715670
OJPI01007905
[OJPI] human gut metagenome; stool sample
491
416
-
Asn
GTT
[ENA]
¢þ
>WENV182722456
OJPQ01000802
[OJPQ] human gut metagenome; stool sample
1318
1393
+
Asn
GTT
[ENA]
¢þ
>WENV182756606
OJRG01002457
[OJRG] human gut metagenome; stool sample
415
490
+
Asn
GTT
[ENA]
¢þ
>WENV182760368
OJRL01000036
[OJRL] human gut metagenome; stool sample
1731
1656
-
Asn
GTT
[ENA]
¢þ
>WENV182761355
OJRM01000305
[OJRM] human gut metagenome; stool sample
24135
24210
+
Asn
GTT
[ENA]
¢þ
>WENV182776246
OJSB01004267
[OJSB] human gut metagenome; human gut
3890
3965
+
Asn
GTT
[ENA]
¢þ
>WENV182788692
OJSL01000413
[OJSL] human gut metagenome; human gut
43298
43373
+
Asn
GTT
[ENA]
¢þ
>WENV182788840
OJSL01001081
[OJSL] human gut metagenome; human gut
1897
1822
-
Asn
GTT
[ENA]
¢þ
>WENV182796223
OJSQ01009443
[OJSQ] human gut metagenome; human gut
2609
2684
+
Asn
GTT
[ENA]
¢þ
>WENV182800861
OJUG01000035
[OJUG] human gut metagenome; human gut
1864
1789
-
Asn
GTT
[ENA]
¢þ
>WENV182801875
OJUG01002598
[OJUG] human gut metagenome; human gut
1010
935
-
Asn
GTT
[ENA]
¢þ
>WENV182941352
OKVG01001288
[OKVG] human gut metagenome; human gut
9679
9754
+
Asn
GTT
[ENA]
¢þ
>WENV183034555
OLFZ01000146
[OLFZ] human gut metagenome; faeces
79859
79934
+
Asn
GTT
[ENA]
¢þ
>WENV183048782
OLGH01000732
[OLGH] human gut metagenome; faeces
4950
4875
-
Asn
GTT
[ENA]
¢þ
>WENV183050283
OLGI01000246
[OLGI] human gut metagenome; faeces
57212
57287
+
Asn
GTT
[ENA]
¢þ
>WENV183066218
OLIK01018468
[OLIK] metagenome; faeces
610
535
-
Asn
GTT
[ENA]
¢þ
>WENV183073875
OLIU01002116
[OLIU] human gut metagenome; stool sample
1576
1501
-
Asn
GTT
[ENA]
¢þ
>WENV183077186
OLIW01023057
[OLIW] human gut metagenome; feces
1292
1367
+
Asn
GTT
[ENA]
¢þ
>WENV183089098
OLJW01002024
[OLJW] human gut metagenome; human gut
17563
17638
+
Asn
GTT
[ENA]
¢þ
>WENV183091447
OLKG01000656
[OLKG] human gut metagenome; human gut
29902
29977
+
Asn
GTT
[ENA]
¢þ
>WENV183091668
OLKG01002221
[OLKG] human gut metagenome; human gut
1897
1822
-
Asn
GTT
[ENA]
¢þ
>WENV183264914
OLRS01001003
[OLRS] human gut metagenome; faeces
5177
5102
-
Asn
GTT
[ENA]
¢þ
>WENV183371135
OLXV01007425
[OLXV] human gut metagenome; feces
2117
2042
-
Asn
GTT
[ENA]
¢þ
>WENV183393381
OLZF01001732
[OLZF] human gut metagenome; feces
1900
1825
-
Asn
GTT
[ENA]
¢þ
>WENV183404298
OLZW01010621
[OLZW] human gut metagenome; feces
171
96
-
Asn
GTT
[ENA]
¢þ
>WENV183411801
OMAL01002521
[OMAL] human gut metagenome; feces
1407
1332
-
Asn
GTT
[ENA]
¢þ
>WENV183431314
OMBQ01003157
[OMBQ] human gut metagenome; feces
4876
4951
+
Asn
GTT
[ENA]
¢þ
>WENV183443988
OMCN01028487
[OMCN] human gut metagenome; feces
349
274
-
Asn
GTT
[ENA]
¢þ
>WENV183461086
OMDR01001601
[OMDR] human gut metagenome; feces
8990
9065
+
Asn
GTT
[ENA]
¢þ
>WENV183500024
OMGQ01001125
[OMGQ] human gut metagenome; human gut
15535
15610
+
Asn
GTT
[ENA]
¢þ
>WENV183507307
OMGY01015202
[OMGY] human gut metagenome; human gut
1100
1175
+
Asn
GTT
[ENA]
¢þ
>WENV183522404
ONZR01000004
[ONZR] human gut metagenome; human gut
1606
1531
-
Asn
GTT
[ENA]
¢þ
>WENV183525401
ONZU01000392
[ONZU] human gut metagenome; human gut
41683
41758
+
Asn
GTT
[ENA]
¢þ
>WENV183525402
ONZU01000392
[ONZU] human gut metagenome; human gut
41801
41876
+
Asn
GTT
[ENA]
¢þ
>WENV183532557
OOAD01001764
[OOAD] human gut metagenome; human gut
1425
1350
-
Asn
GTT
[ENA]
¢þ
>WENV183539175
OOAI01000539
[OOAI] human gut metagenome; human gut
19387
19462
+
Asn
GTT
[ENA]
¢þ
>WENV183539176
OOAI01000539
[OOAI] human gut metagenome; human gut
19505
19580
+
Asn
GTT
[ENA]
¢þ
>WENV183540849
OOAK01000569
[OOAK] human gut metagenome; human gut
29822
29897
+
Asn
GTT
[ENA]
¢þ
>WENV183544415
OOAO01002900
[OOAO] human gut metagenome; human gut
1435
1360
-
Asn
GTT
[ENA]
¢þ
>WENV183554943
OOBN01000330
[OOBN] human gut metagenome; human gut
47227
47302
+
Asn
GTT
[ENA]
¢þ
>WENV183560131
OOBT01006243
[OOBT] human gut metagenome; human gut
1457
1382
-
Asn
GTT
[ENA]
¢þ
>WENV183634543
OOIG01048335
[OOIG] human gut metagenome; human gut
910
835
-
Asn
GTT
[ENA]
¢þ
>WENV183638287
OQVH01021829
[OQVH] human gut metagenome; human gut
914
989
+
Asn
GTT
[ENA]
¢þ
>WENV183743823
PJUK01000006
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
189543
189468
-
Asn
GTT
[ENA]
¢þ
>WENV183743973
PJUK01000081
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
64022
64097
+
Asn
GTT
[ENA]
¢þ
>WENV183764600
PPYE01320161
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
28221
28296
+
Asn
GTT
[ENA]
¢þ
>WENV170029605
CDYG01028721
[CDYG] gut metagenome; human stools
64
139
+
Asn
GTT
[ENA]
¢þ
>WENV170079980
CDZW01027523
[CDZW] gut metagenome; human stools
15705
15780
+
Asn
GTT
[ENA]
¢þ
>WENV170081411
CDZY01014780
[CDZY] gut metagenome; human stools
3461
3386
-
Asn
GTT
[ENA]
¢þ
>WENV170082753
CEAA01007343
[CEAA] gut metagenome; human stools
1692
1617
-
Asn
GTT
[ENA]
¢þ
>WENV170088221
CEAD01039726
[CEAD] gut metagenome; human stools
1673
1598
-
Asn
GTT
[ENA]
¢þ
>WENV170091967
CEAG01031098
[CEAG] gut metagenome; human stools
1692
1617
-
Asn
GTT
[ENA]
¢þ
>WENV170095972
CEAK01000020
[CEAK] gut metagenome; human stools
28665
28740
+
Asn
GTT
[ENA]
¢þ
>WENV170097227
CEAL01017729
[CEAL] gut metagenome; human stools
1635
1560
-
Asn
GTT
[ENA]
¢þ
>WENV170108813
CECA01047022
[CECA] gut metagenome; human stools
1608
1533
-
Asn
GTT
[ENA]
¢þ
>WENV170109013
CECA01057358
[CECA] gut metagenome; human stools
419
344
-
Asn
GTT
[ENA]
¢þ
>WENV170109014
CECA01057358
[CECA] gut metagenome; human stools
305
230
-
Asn
GTT
[ENA]
¢þ
>WENV170109015
CECA01057358
[CECA] gut metagenome; human stools
191
116
-
Asn
GTT
[ENA]
¢þ
>WENV170109016
CECA01057358
[CECA] gut metagenome; human stools
77
2
-
Asn
GTT
[ENA]
¢þ
>WENV170355604
CETI01265972
[CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
366
441
+
Asn
GTT
[ENA]
¢þ
>W141486130
JGAA01000064
Betaproteobacteria
Bordetella holmesii CDC-H635-BH [JGAA]
33202
33277
+
Asn
GTT
[ENA]
¡û
>W141486136
JGAA01000072
Betaproteobacteria
Bordetella holmesii CDC-H635-BH [JGAA]
54820
54745
-
Asn
GTT
[ENA]
¡û
>C181028842
CP017885
Betaproteobacteria
Bordetella pertussis J081 [CP017885]
1205463
1205538
+
Asn
GTT
-
¡û
>C181028858
CP017885
Betaproteobacteria
Bordetella pertussis J081 [CP017885]
4020110
4020185
+
Asn
GTT
-
¡û
>C181030020
CP018041
Betaproteobacteria
Bordetella pertussis J306 [CP018041]
1275783
1275858
+
Asn
GTT
-
¡û
>C181030035
CP018041
Betaproteobacteria
Bordetella pertussis J306 [CP018041]
4016817
4016892
+
Asn
GTT
-
¡û
>C181034398
CP018899
Betaproteobacteria
Bordetella holmesii [CP018899]
1405277
1405352
+
Asn
GTT
-
¡û
>C181034438
CP018899
Betaproteobacteria
Bordetella holmesii [CP018899]
146823
146748
-
Asn
GTT
-
¡û
>C181045581
CP020647
Betaproteobacteria
Bordetella holmesii F028 [CP020647]
1409459
1409534
+
Asn
GTT
-
¡û
>C181045621
CP020647
Betaproteobacteria
Bordetella holmesii F028 [CP020647]
147602
147527
-
Asn
GTT
-
¡û
>C181212516
LS483424
Betaproteobacteria
Bordetella parapertussis NCTC10520 [LS483424]
2770584
2770509
-
Asn
GTT
-
¡û
>C181212536
LS483424
Betaproteobacteria
Bordetella parapertussis NCTC10520 [LS483424]
97150
97075
-
Asn
GTT
-
¡û
>C191027132
CP024175
Betaproteobacteria
Bordetella bronchiseptica A345 [CP024175]
2115400
2115475
+
Asn
GTT
-
¡û
>C191027143
CP024175
Betaproteobacteria
Bordetella bronchiseptica A345 [CP024175]
5175159
5175234
+
Asn
GTT
-
¡û
>C191032452
CP025349
Betaproteobacteria
Bordetella pertussis H672 [CP025349]
4019988
4020063
+
Asn
GTT
-
¡û
>C191032461
CP025349
Betaproteobacteria
Bordetella pertussis H672 [CP025349]
2778688
2778613
-
Asn
GTT
-
¡û
>C191034351
CP025387
Betaproteobacteria
Bordetella pertussis E365 [CP025387]
4015815
4015890
+
Asn
GTT
-
¡û
>C191034360
CP025387
Betaproteobacteria
Bordetella pertussis E365 [CP025387]
2776613
2776538
-
Asn
GTT
-
¡û
>C191034401
CP025388
Betaproteobacteria
Bordetella pertussis G102 [CP025388]
4023170
4023245
+
Asn
GTT
-
¡û
>C191034410
CP025388
Betaproteobacteria
Bordetella pertussis G102 [CP025388]
2781864
2781789
-
Asn
GTT
-
¡û
>C191035649
CP025479
Betaproteobacteria
Bordetella pertussis I892 [CP025479]
1323907
1323982
+
Asn
GTT
-
¡û
>C191035665
CP025479
Betaproteobacteria
Bordetella pertussis I892 [CP025479]
4013395
4013470
+
Asn
GTT
-
¡û
>C191035699
CP025480
Betaproteobacteria
Bordetella pertussis E087 [CP025480]
1275798
1275873
+
Asn
GTT
-
¡û
>C191035713
CP025480
Betaproteobacteria
Bordetella pertussis E087 [CP025480]
4014757
4014832
+
Asn
GTT
-
¡û
>C191035928
CP025522
Betaproteobacteria
Bordetella avium JBBA [CP025522]
3724589
3724664
+
Asn
GTT
-
¡û
>C191035946
CP025522
Betaproteobacteria
Bordetella avium JBBA [CP025522]
2589607
2589532
-
Asn
GTT
-
¡û
>C191042716
CP026437
Betaproteobacteria
Bordetella pertussis J334 [CP026437]
1279993
1280068
+
Asn
GTT
-
¡û
>C191042731
CP026437
Betaproteobacteria
Bordetella pertussis J334 [CP026437]
4023140
4023215
+
Asn
GTT
-
¡û
>C191042816
CP026439
Betaproteobacteria
Bordetella pertussis J330 [CP026439]
1277892
1277967
+
Asn
GTT
-
¡û
>C191042831
CP026439
Betaproteobacteria
Bordetella pertussis J330 [CP026439]
4019977
4020052
+
Asn
GTT
-
¡û
>C191043629
CP026455
Betaproteobacteria
Bordetella pertussis J258 [CP026455]
4023146
4023221
+
Asn
GTT
-
¡û
>C191043638
CP026455
Betaproteobacteria
Bordetella pertussis J258 [CP026455]
2783938
2783863
-
Asn
GTT
-
¡û
>C191043879
CP026460
Betaproteobacteria
Bordetella pertussis J253 [CP026460]
4021043
4021118
+
Asn
GTT
-
¡û
>C191043888
CP026460
Betaproteobacteria
Bordetella pertussis J253 [CP026460]
2781837
2781762
-
Asn
GTT
-
¡û
>W141520888
JGWE01000051
Betaproteobacteria
Bordetella pertussis B200 [JGWE]
24103
24178
+
Asn
GTT
[ENA]
¡û
>W141520896
JGWE01000079
Betaproteobacteria
Bordetella pertussis B200 [JGWE]
14893
14818
-
Asn
GTT
[ENA]
¡û
>C191047103
CP026886
Betaproteobacteria
Bordetella pertussis J698 [CP026886]
4017833
4017908
+
Asn
GTT
-
¡û
>C191047108
CP026886
Betaproteobacteria
Bordetella pertussis J698 [CP026886]
2747514
2747439
-
Asn
GTT
-
¡û
>C191048537
CP026915
Betaproteobacteria
Bordetella pertussis J549 [CP026915]
1277102
1277177
+
Asn
GTT
-
¡û
>C191048551
CP026915
Betaproteobacteria
Bordetella pertussis J549 [CP026915]
4019137
4019212
+
Asn
GTT
-
¡û
>C191048651
CP026917
Betaproteobacteria
Bordetella pertussis J233 [CP026917]
4016952
4017027
+
Asn
GTT
-
¡û
>C191048660
CP026917
Betaproteobacteria
Bordetella pertussis J233 [CP026917]
2798518
2798443
-
Asn
GTT
-
¡û
>C191048899
CP026922
Betaproteobacteria
Bordetella pertussis J092 [CP026922]
4026288
4026363
+
Asn
GTT
-
¡û
>C191048908
CP026922
Betaproteobacteria
Bordetella pertussis J092 [CP026922]
2781839
2781764
-
Asn
GTT
-
¡û
>C191049739
CP026992
Betaproteobacteria
Bordetella pertussis J171 [CP026992]
4016949
4017024
+
Asn
GTT
-
¡û
>C191049748
CP026992
Betaproteobacteria
Bordetella pertussis J171 [CP026992]
2798511
2798436
-
Asn
GTT
-
¡û
>W141522664
JGXO01000011
Betaproteobacteria
Bordetella bronchiseptica MBORD675 [JGXO]
35532
35607
+
Asn
GTT
[ENA]
¡û
>W141522674
JGXO01000018
Betaproteobacteria
Bordetella bronchiseptica MBORD675 [JGXO]
122620
122695
+
Asn
GTT
[ENA]
¡û
>W141522858
JGXS01000014
Betaproteobacteria
Bordetella bronchiseptica MBORD731 [JGXS]
168903
168828
-
Asn
GTT
[ENA]
¡û
>W141531950
JHEO01000220
Betaproteobacteria
Bordetella hinzii CA90 BAL1384 [JHEO]
104565
104640
+
Asn
GTT
[ENA]
¡û
>W141621682
JJNW01000209
Betaproteobacteria
Bordetella holmesii H620 [JJNW]
32733
32808
+
Asn
GTT
[ENA]
¡û
>W141621704
JJNW01000366
Betaproteobacteria
Bordetella holmesii H620 [JJNW]
3457
3532
+
Asn
GTT
[ENA]
¡û
>W1910471760
FXBH01000032
Betaproteobacteria
Kingella negevensis Sch538 SW7208426 [FXBH]
66749
66824
+
Asn
GTT
[ENA]
¡û
>W1910471780
FXBH01000039
Betaproteobacteria
Kingella negevensis Sch538 SW7208426 [FXBH]
66472
66547
+
Asn
GTT
[ENA]
¡û
>W1910551160
FZRL01000003
Betaproteobacteria
Kingella denitrificans [FZRL]
188804
188879
+
Asn
GTT
[ENA]
¡û
>W1910551183
FZRL01000006
Betaproteobacteria
Kingella denitrificans [FZRL]
37386
37461
+
Asn
GTT
[ENA]
¡û
>W1911423309
NXFE01000050
Betaproteobacteria
Bordetella pertussis 601-9 [NXFE]
9835
9760
-
Asn
GTT
[ENA]
¡û
>W1911423310
NXFE01000055
Betaproteobacteria
Bordetella pertussis 601-9 [NXFE]
13788
13863
+
Asn
GTT
[ENA]
¡û
>W1911483084
OAHF01000026
Betaproteobacteria
Neisseria meningitidis [OAHF]
11411
11486
+
Asn
GTT
[ENA]
¡û
>W1911483106
OAHF01000111
Betaproteobacteria
Neisseria meningitidis [OAHF]
8295
8370
+
Asn
GTT
[ENA]
¡û
>W1911483849
OAHU01000004
Betaproteobacteria
Neisseria meningitidis [OAHU]
76748
76673
-
Asn
GTT
[ENA]
¡û
>W1911483866
OAHU01000017
Betaproteobacteria
Neisseria meningitidis [OAHU]
5564
5489
-
Asn
GTT
[ENA]
¡û
>W1911486504
OAJV01000026
Betaproteobacteria
Neisseria meningitidis [OAJV]
20587
20662
+
Asn
GTT
[ENA]
¡û
>W1911486542
OAJV01000140
Betaproteobacteria
Neisseria meningitidis [OAJV]
5841
5916
+
Asn
GTT
[ENA]
¡û
>W1911489266
OALW01000010
Betaproteobacteria
Neisseria meningitidis [OALW]
38772
38697
-
Asn
GTT
[ENA]
¡û
>W1911489325
OALW01000160
Betaproteobacteria
Neisseria meningitidis [OALW]
5158
5083
-
Asn
GTT
[ENA]
¡û
>W1810448793
PZMK01000440
Betaproteobacteria
Achromobacter xylosoxidans BHW-15 [PZMK]
3405
3330
-
Asn
GTT
[ENA]
¡û
>W1810448810
PZMK01000906
Betaproteobacteria
Achromobacter xylosoxidans BHW-15 [PZMK]
2859
2934
+
Asn
GTT
[ENA]
¡û
>W10111226
ADCY01000056
Betaproteobacteria
Simonsiella muelleri ATCC 29453 [ADCY]
9108
9183
+
Asn
GTT
[ENA]
¡û
>W10111241
ADCY01000077
Betaproteobacteria
Simonsiella muelleri ATCC 29453 [ADCY]
1701
1626
-
Asn
GTT
[ENA]
¡û
>W10115852
ADMS01000020
Betaproteobacteria
Achromobacter piechaudii ATCC 43553 [ADMS]
18068
17993
-
Asn
GTT
[ENA]
¡û
>W1510134840
CFXI01000038
Betaproteobacteria
Bordetella pertussis B147 [CFXI]
9289
9364
+
Asn
GTT
[ENA]
¡û
>W1510134861
CFXI01000280
Betaproteobacteria
Bordetella pertussis B147 [CFXI]
2762
2687
-
Asn
GTT
[ENA]
¡û
>W1510135594
CFXY01000001
Betaproteobacteria
Bordetella pertussis B256 [CFXY]
9673
9598
-
Asn
GTT
[ENA]
¡û
>W1510135608
CFXY01000054
Betaproteobacteria
Bordetella pertussis B256 [CFXY]
13603
13678
+
Asn
GTT
[ENA]
¡û
>W1510136076
CFYI01000046
Betaproteobacteria
Bordetella pertussis B255 [CFYI]
8508
8583
+
Asn
GTT
[ENA]
¡û
>W1510136094
CFYI01000209
Betaproteobacteria
Bordetella pertussis B255 [CFYI]
1858
1783
-
Asn
GTT
[ENA]
¡û
>W1510136268
CFYM01000304
Betaproteobacteria
Bordetella pertussis B251 [CFYM]
1392
1317
-
Asn
GTT
[ENA]
¡û
>W1510136271
CFYM01000338
Betaproteobacteria
Bordetella pertussis B251 [CFYM]
1828
1753
-
Asn
GTT
[ENA]
¡û
>W1510137010
CFZC01000061
Betaproteobacteria
Bordetella pertussis B052 [CFZC]
5636
5561
-
Asn
GTT
[ENA]
¡û
>W1510137012
CFZC01000069
Betaproteobacteria
Bordetella pertussis B052 [CFZC]
4066
4141
+
Asn
GTT
[ENA]
¡û
>W1510137365
CFZK01000001
Betaproteobacteria
Bordetella pertussis B329 [CFZK]
42709
42784
+
Asn
GTT
[ENA]
¡û
>W1510137383
CFZK01000053
Betaproteobacteria
Bordetella pertussis B329 [CFZK]
13616
13691
+
Asn
GTT
[ENA]
¡û
>W1510183432
CHFP01000069
Betaproteobacteria
Bordetella pertussis B003 [CHFP]
5650
5575
-
Asn
GTT
[ENA]
¡û
>W1510183437
CHFP01000079
Betaproteobacteria
Bordetella pertussis B003 [CHFP]
9673
9598
-
Asn
GTT
[ENA]
¡û
>W1510183461
CHFQ01000001
Betaproteobacteria
Bordetella pertussis B017 [CHFQ]
58288
58363
+
Asn
GTT
[ENA]
¡û
>W1510183478
CHFQ01000058
Betaproteobacteria
Bordetella pertussis B017 [CHFQ]
6848
6773
-
Asn
GTT
[ENA]
¡û
>W1510190032
CHLB01000065
Betaproteobacteria
Bordetella pertussis B308 [CHLB]
9289
9364
+
Asn
GTT
[ENA]
¡û
>W1510190034
CHLB01000067
Betaproteobacteria
Bordetella pertussis B308 [CHLB]
9866
9791
-
Asn
GTT
[ENA]
¡û
>W1510190082
CHLC01000047
Betaproteobacteria
Bordetella pertussis B258 [CHLC]
4068
3993
-
Asn
GTT
[ENA]
¡û
>W1510190094
CHLC01000283
Betaproteobacteria
Bordetella pertussis B258 [CHLC]
1866
1941
+
Asn
GTT
[ENA]
¡û
>W1510214631
CIGO01000001
Betaproteobacteria
Bordetella pertussis B220 [CIGO]
9673
9598
-
Asn
GTT
[ENA]
¡û
>W1510214650
CIGO01000055
Betaproteobacteria
Bordetella pertussis B220 [CIGO]
6982
6907
-
Asn
GTT
[ENA]
¡û
>W1510536519
CSMQ01000070
Betaproteobacteria
Bordetella pertussis B125 [CSMQ]
1365
1290
-
Asn
GTT
[ENA]
¡û
>W1510536534
CSMQ01000344
Betaproteobacteria
Bordetella pertussis B125 [CSMQ]
1868
1943
+
Asn
GTT
[ENA]
¡û
>W1510537170
CSND01000079
Betaproteobacteria
Bordetella pertussis B133 [CSND]
9299
9374
+
Asn
GTT
[ENA]
¡û
>W1510537188
CSND01000328
Betaproteobacteria
Bordetella pertussis B133 [CSND]
1866
1941
+
Asn
GTT
[ENA]
¡û
>W1510537202
CSNE01000033
Betaproteobacteria
Bordetella pertussis B033 [CSNE]
9254
9329
+
Asn
GTT
[ENA]
¡û
>W1510537227
CSNE01000341
Betaproteobacteria
Bordetella pertussis B033 [CSNE]
1889
1964
+
Asn
GTT
[ENA]
¡û
>W1510537350
CSNH01000078
Betaproteobacteria
Bordetella pertussis B336 [CSNH]
685
610
-
Asn
GTT
[ENA]
¡û
>W1510537366
CSNH01000273
Betaproteobacteria
Bordetella pertussis B336 [CSNH]
2845
2770
-
Asn
GTT
[ENA]
¡û
>W1510538337
CSOB01000055
Betaproteobacteria
Bordetella pertussis B160 [CSOB]
5789
5714
-
Asn
GTT
[ENA]
¡û
>W1510538355
CSOB01000184
Betaproteobacteria
Bordetella pertussis B160 [CSOB]
2755
2680
-
Asn
GTT
[ENA]
¡û
>W1510540535
CSPV01000064
Betaproteobacteria
Bordetella pertussis B338 [CSPV]
5632
5557
-
Asn
GTT
[ENA]
¡û
>W1510540538
CSPV01000070
Betaproteobacteria
Bordetella pertussis B338 [CSPV]
4017
4092
+
Asn
GTT
[ENA]
¡û
>W1510542248
CSRF01000001
Betaproteobacteria
Bordetella pertussis B340 [CSRF]
63734
63809
+
Asn
GTT
[ENA]
¡û
>W1510542254
CSRF01000003
Betaproteobacteria
Bordetella pertussis B340 [CSRF]
41132
41057
-
Asn
GTT
[ENA]
¡û
>W1510542825
CSRR01000055
Betaproteobacteria
Bordetella pertussis B115 [CSRR]
9309
9384
+
Asn
GTT
[ENA]
¡û
>W1510542832
CSRR01000066
Betaproteobacteria
Bordetella pertussis B115 [CSRR]
9804
9729
-
Asn
GTT
[ENA]
¡û
>W11114077
ADCY01000056
Betaproteobacteria
Simonsiella muelleri ATCC 29453 [ADCY]
9108
9183
+
Asn
GTT
[ENA]
¡û
>W11114092
ADCY01000077
Betaproteobacteria
Simonsiella muelleri ATCC 29453 [ADCY]
1701
1626
-
Asn
GTT
[ENA]
¡û
>W11120051
ADMF01000045
Betaproteobacteria
Sutterella wadsworthensis 3_1_45B [ADMF]
2032
1957
-
Asn
GTT
[ENA]
¡û
>W11120349
ADMS01000020
Betaproteobacteria
Achromobacter piechaudii ATCC 43553 [ADMS]
18068
17993
-
Asn
GTT
[ENA]
¡û
>W1511579412
LARC01000001
Betaproteobacteria
Burkholderia sp. K4410.MGS-135 [LARC]
2800
2725
-
Asn
GTT
[ENA]
¡û
>W11151261
AEWV01000015
Betaproteobacteria
Kingella denitrificans ATCC 33394 [AEWV]
69279
69204
-
Asn
GTT
[ENA]
¡û
>W11151266
AEWV01000021
Betaproteobacteria
Kingella denitrificans ATCC 33394 [AEWV]
88817
88742
-
Asn
GTT
[ENA]
¡û
>C161106886
LN869922
Betaproteobacteria
Kingella kingae KWG1 [LN869922]
59583
59658
+
Asn
GTT
-
¡û
>C161106922
LN869922
Betaproteobacteria
Kingella kingae KWG1 [LN869922]
793277
793202
-
Asn
GTT
-
¡û
>W121110575
ALIJ01000034
Betaproteobacteria
Kingella kingae 11220434 [ALIJ]
21947
22022
+
Asn
GTT
[ENA]
¡û
>W121110593
ALIJ01000072
Betaproteobacteria
Kingella kingae 11220434 [ALIJ]
50583
50658
+
Asn
GTT
[ENA]
¡û
>W133001325
ANGE01000029
Betaproteobacteria
Bordetella holmesii 44057 [ANGE]
71
-2
-
Asn
GTT
[ENA]
¡û
>W133001326
ANGE01000036
Betaproteobacteria
Bordetella holmesii 44057 [ANGE]
71
-2
-
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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