tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.308123 (110 seq.)
>W1710866361 LMHK01000001 Alphaproteobacteria Devosia sp. Root685 [LMHK] 902639 902714 + Trp CCA [ENA] ¡û
>W1710889749 LNBC01000015 Alphaproteobacteria Paracoccus aminovorans [LNBC] 73397 73472 + Trp CCA [ENA] ¡û
>W1711135067 LUYN01000014 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 19685 19610 - Trp CCA [ENA] ¡û
>W1711387081 MEGG01000016 Alphaproteobacteria Pelagibacterium sp. SCN 63-17 [MEGG] 6662 6587 - Trp CCA [ENA] ¡û
>W1711961715 NCSQ01000148 Alphaproteobacteria Aquidulcibacter paucihalophilus TH1-2 [NCSQ] 55435 55360 - Trp CCA [ENA] ¡û
>W1712104769 NIPZ01000088 Alphaproteobacteria Paracoccus yeei [NIPZ] 59888 59963 + Trp CCA [ENA] ¡û
>C171067783 CP017781 Alphaproteobacteria Rhodobacter sp. LPB0142 [CP017781] 2855884 2855809 - Trp CCA - ¡û
>W131158894 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 1883049 1883124 + Trp CCA [ENA] ¡û
>C016009 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 [CP000489, CP000490] 722941 723016 + Trp CCA [Ensembl] ¡û
>WENV180045554 MOXS02141931 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 1418 1343 - Trp CCA [ENA] ¢þ
>WENV180047431 MPLT02220281 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 1679 1754 + Trp CCA [ENA] ¢þ
>WENV017116 AACY020477261 Marine microbial communities from Global Ocean Sampling (GOS) 657 580 - Trp CCA [ENA]
>WENV183731835 PJTT01000231 [PJTT] soil metagenome; Soil (2) enriched on wood chips 3893 3818 - Trp CCA [ENA] ¢þ
>WENV183733614 PJTY01006705 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 1277 1202 - Trp CCA [ENA] ¢þ
>WENV183744806 PJUL01000274 [PJUL] feces metagenome; Chicken feces enriched on filter paper 12188 12113 - Trp CCA [ENA] ¢þ
>WENV183745123 PJUL01002679 [PJUL] feces metagenome; Chicken feces enriched on filter paper 490 565 + Trp CCA [ENA] ¢þ
>WENV183808657 PVBE011316833 [PVBE] marine metagenome; water 173 248 + Trp CCA [ENA] ¢þ
>WENV170127593 CENP01224758 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 572 497 - Trp CCA [ENA] ¢þ
>WENV170160289 CEOK01131148 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 194 269 + Trp CCA [ENA] ¢þ
>WENV170168575 CEOP01104008 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4244 4319 + Trp CCA [ENA] ¢þ
>WENV170170735 CEOQ01021009 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 159 84 - Trp CCA [ENA] ¢þ
>WENV170182026 CEOX01060918 [CEOX] marine metagenome genome assembly TARA_065_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 458 383 - Trp CCA [ENA] ¢þ
>WENV170186067 CEPA01015630 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 153 228 + Trp CCA [ENA] ¢þ
>WENV170228404 CEQG01008240 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6475 6400 - Trp CCA [ENA] ¢þ
>WENV170247129 CEQQ01017847 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 1 - Trp CCA [ENA] ¢þ
>WENV170250646 CEQT01005751 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 279 354 + Trp CCA [ENA] ¢þ
>WENV170255527 CEQX01002892 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 288 213 - Trp CCA [ENA] ¢þ
>WENV170279366 CERR01015289 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2965 3040 + Trp CCA [ENA] ¢þ
>WENV170282605 CERS01209105 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 184 109 - Trp CCA [ENA] ¢þ
>WENV170284024 CERV01014590 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2932 3007 + Trp CCA [ENA] ¢þ
>WENV170310593 CESM01053163 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 77 + Trp CCA [ENA] ¢þ
>WENV170324908 CESS01160101 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 709 634 - Trp CCA [ENA] ¢þ
>WENV170412176 CEUK01014165 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 159 84 - Trp CCA [ENA] ¢þ
>WENV170467107 CEVE01116921 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 417 342 - Trp CCA [ENA] ¢þ
>WENV170500451 CEVU01015065 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 740 665 - Trp CCA [ENA] ¢þ
>WENV170502500 CEVV01000026 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7439 7364 - Trp CCA [ENA] ¢þ
>WENV170515270 CEWB01013434 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 166 91 - Trp CCA [ENA] ¢þ
>WENV170525197 CEWH01094061 [CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 534 459 - Trp CCA [ENA] ¢þ
>WENV170564875 CZPY01000015 [CZPY] metagenome; PAHs-polluted Soil 73397 73472 + Trp CCA [ENA] ¢þ
>WENV170582044 FUFK010073312 [FUFK] metagenome; unknown 1361 1286 - Trp CCA [ENA] ¢þ
>WENV170584095 FUFK010189980 [FUFK] metagenome; unknown 203 278 + Trp CCA [ENA] ¢þ
>WENV170587003 FUFK010459040 [FUFK] metagenome; unknown 186 261 + Trp CCA [ENA] ¢þ
>WENV170593781 FUFK011008912 [FUFK] metagenome; unknown 134 209 + Trp CCA [ENA] ¢þ
>WENV170606714 FUWD010716671 [FUWD] metagenome; unknown 26 101 + Trp CCA [ENA] ¢þ
>WENV170793869 MDSV01123481 [MDSV] marine metagenome; seawater 3117 3042 - Trp CCA [ENA] ¢þ
>WENV170795040 MDSV01141719 [MDSV] marine metagenome; seawater 196 121 - Trp CCA [ENA] ¢þ
>WENV170802972 MDSW01022685 [MDSW] marine metagenome; seawater 345 270 - Trp CCA [ENA] ¢þ
>WENV170804785 MDSW01053029 [MDSW] marine metagenome; seawater 916 841 - Trp CCA [ENA] ¢þ
>WENV170847081 MDTA01053913 [MDTA] marine metagenome; seawater 4962 4887 - Trp CCA [ENA] ¢þ
>WENV170871935 MDTB01212265 [MDTB] marine metagenome; seawater 31 106 + Trp CCA [ENA] ¢þ
>WENV170873116 MDTB01227931 [MDTB] marine metagenome; seawater 8248 8173 - Trp CCA [ENA] ¢þ
>WENV170908608 MDTE01067326 [MDTE] marine metagenome; seawater 2296 2371 + Trp CCA [ENA] ¢þ
>PL191000038 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 722941 723016 + Trp CCA [Ensembl] ¡û
>W09103075 AAIT01000032 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 7114 7039 - Trp CCA [ENA] ¡û
>C181099803 CP024422 Alphaproteobacteria Paracoccus yeei TT13 [CP024422] 669466 669391 - Trp CCA - ¡û
>C181116766 CP025408 Alphaproteobacteria Paracoccus tegillarcae BM15 [CP025408] 2056908 2056983 + Trp CCA - ¡û
>C181139131 CP026747 Alphaproteobacteria Devosia sp. I507 [CP026747] 3398187 3398262 + Trp CCA - ¡û
>C181190848 CP030239 Alphaproteobacteria Paracoccus mutanolyticus RSP-02 [CP030239] 1147447 1147372 - Trp CCA - ¡û
>C181203387 LN832559 Alphaproteobacteria Paracoccus aminovorans [LN832559] 585601 585676 + Trp CCA - ¡û
>C191073591 CP031078 Alphaproteobacteria Paracoccus yeei CCUG 32053 [CP031078] 2690502 2690427 - Trp CCA - ¡û
>C191134380 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 [CP035090, CP035091] 2317340 2317415 + Trp CCA - ¡û
>W141558868 JHWH01000007 Alphaproteobacteria Paracoccus yeei ATCC BAA-599 [JHWH] 152279 152204 - Trp CCA [ENA] ¡û
>W141739309 JNNO01000043 Alphaproteobacteria Devosia sp. LC5 [JNNO] 130198 130273 + Trp CCA [ENA] ¡û
>W1910547050 FZNM01000001 Alphaproteobacteria Paracoccus sediminis DSM 26170 [FZNM] 168542 168617 + Trp CCA [ENA] ¡û
>W1911397930 NWMQ01000038 Alphaproteobacteria Paracoccus sp. SY [NWMQ] 6952 7027 + Trp CCA [ENA] ¡û
>W1810005698 BFBR01000008 Alphaproteobacteria Candidatus Phycosocius bacilliformis bacilliformis BOTRYCO-2 [BFBR] 63709 63784 + Trp CCA [ENA] ¡û
>W1810235967 PPGA01000002 Alphaproteobacteria Paracoccus denitrificans ISTOD1 [PPGA] 292942 293017 + Trp CCA [ENA] ¡û
>WENV027473 AACY021046443 Marine microbial communities from Global Ocean Sampling (GOS) 185 262 + Trp CCA [ENA]
>W1810445012 PZKF01000047 Alphaproteobacteria Phaeovulum veldkampii DSM 11550 [PZKF] 16862 16787 - Trp CCA [ENA] ¡û
>W1810543584 QDKM01000002 Alphaproteobacteria Pararhodobacter oceanensis AM505 [QDKM] 57579 57654 + Trp CCA [ENA] ¡û
>W1810585300 QFCQ01000001 Alphaproteobacteria Paracoccus thiocyanatus SST [QFCQ] 3729 3804 + Trp CCA [ENA] ¡û
>W1810685685 QKZL01000028 Alphaproteobacteria Palleronia aestuarii DSM 22009 [QKZL] 1318 1243 - Trp CCA [ENA] ¡û
>W1810721653 QNSD01000034 Alphaproteobacteria Rhodobacter sp. 140A [QNSD] 7298 7373 + Trp CCA [ENA] ¡û
>W1810759466 QPJL01000002 Alphaproteobacteria Paracoccus lutimaris CECT 8525 [QPJL] 21140 21065 - Trp CCA [ENA] ¡û
>W1810762330 QPML01000059 Alphaproteobacteria Paracoccus versutus MAL 1HM19 [QPML] 4732 4807 + Trp CCA [ENA] ¡û
>W1810862251 QTUJ01000002 Alphaproteobacteria Paracoccus versutus DSM 17099 [QTUJ] 587331 587406 + Trp CCA [ENA] ¡û
>W1810884875 QUMX01000056 Alphaproteobacteria Paracoccus versutus DSM 582 [QUMX] 5330 5405 + Trp CCA [ENA] ¡û
>WENV033143 AACY021503938 Marine microbial communities from Global Ocean Sampling (GOS) 590 513 - Trp CCA [ENA]
>WENV034380 AACY021605013 Marine microbial communities from Global Ocean Sampling (GOS) 215 138 - Trp CCA [ENA]
>W1511325042 JQFU01000066 Alphaproteobacteria Rhodovulum sp. NI22 [JQFU] 806 881 + Trp CCA [ENA] ¡û
>W1511348608 JRKO01000019 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 4792 4867 + Trp CCA [ENA] ¡û
>W1511348666 JRKP01000086 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 1070 995 - Trp CCA [ENA] ¡û
>W1511348680 JRKQ01000010 Alphaproteobacteria Paracoccus sanguinis 5503 [JRKQ] 41159 41084 - Trp CCA [ENA] ¡û
>W1511348755 JRKR01000126 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 1022 947 - Trp CCA [ENA] ¡û
>W1511348782 JRKS01000009 Alphaproteobacteria Paracoccus sphaerophysae HAMBI 3106 [JRKS] 53977 53902 - Trp CCA [ENA] ¡û
>W1511348819 JRKT01000013 Alphaproteobacteria Paracoccus sanguinis 4681 [JRKT] 41044 40969 - Trp CCA [ENA] ¡û
>WENV042649 AACY022254864 Marine microbial communities from Global Ocean Sampling (GOS) 780 857 + Trp CCA [ENA]
>WENV043473 AACY022326147 Marine microbial communities from Global Ocean Sampling (GOS) 640 563 - Trp CCA [ENA]
>W1511541976 JZEY01000054 Alphaproteobacteria Devosia chinhatensis IPL18 [JZEY] 1647036 1646961 - Trp CCA [ENA] ¡û
>C161029307 CP010869 Alphaproteobacteria Actibacterium sp. EMB200-NS6 [CP010869] 378275 378350 + Trp CCA [Ensembl] ¡û
>C161040214 CP012156 Alphaproteobacteria Hyphomonadaceae bacterium UKL13-1 [CP012156] 1939931 1939856 - Trp CCA - ¡û
>WENV059854 AACY023377849 Marine microbial communities from Global Ocean Sampling (GOS) 1364 1287 - Trp CCA [ENA]
>WENV060062 AACY023384663 Marine microbial communities from Global Ocean Sampling (GOS) 1184 1261 + Trp CCA [ENA]
>W121060012 AJFB01001406 Alphaproteobacteria Paracoccus denitrificans SD1 [AJFB] 228 153 - Trp CCA [ENA] ¡û
>WENV007396 AACY020193952 Marine microbial communities from Global Ocean Sampling (GOS) 1320 1397 + Trp CCA [ENA]
>W1610728707 LMHK01000001 Alphaproteobacteria Devosia sp. Root685 [LMHK] 902639 902714 + Trp CCA [ENA] ¡û
>W1610750127 LNBC01000015 Alphaproteobacteria Paracoccus aminovorans [LNBC] 73397 73472 + Trp CCA [ENA] ¡û
>W1610946187 LUYN01000014 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 19685 19610 - Trp CCA [ENA] ¡û
>WENV079839 AATN01002075 Wastewater EBPR microbial communities from Bioreactor (Australian sludge) 885 808 - Trp CCA [ENA]
>W1710518481 FNEA01000046 Alphaproteobacteria Paracoccus denitrificans [FNEA] 19526 19451 - Trp CCA [ENA] ¡û
>W1710528233 FNNA01000012 Alphaproteobacteria Paracoccus sanguinis [FNNA] 8750 8825 + Trp CCA [ENA] ¡û
>W1710547690 FODE01000015 Alphaproteobacteria Paracoccus alcaliphilus [FODE] 70812 70737 - Trp CCA [ENA] ¡û
>W1710550646 FOFL01000004 Alphaproteobacteria Devosia sp. YR412 [FOFL] 319775 319700 - Trp CCA [ENA] ¡û
>W1710552383 FOGU01000022 Alphaproteobacteria Tranquillimonas rosea roseus [FOGU] 3558 3633 + Trp CCA [ENA] ¡û
>W1710563607 FOPU01000052 Alphaproteobacteria Paracoccus aminovorans [FOPU] 4924 4999 + Trp CCA [ENA] ¡û
>W1710574702 FOYK01000046 Alphaproteobacteria Paracoccus denitrificans [FOYK] 4747 4822 + Trp CCA [ENA] ¡û
>W1710579486 FPCK01000001 Alphaproteobacteria Devosia crocina [FPCK] 1883011 1882936 - Trp CCA [ENA] ¡û
>W1710581786 FPKI01000065 Alphaproteobacteria Paracoccus pantotrophus [FPKI] 19246 19171 - Trp CCA [ENA] ¡û
>W1710596209 FTMK01000035 Alphaproteobacteria Paracoccus thiocyanatus [FTMK] 19755 19680 - Trp CCA [ENA] ¡û
>W1710609392 FXWK01000001 Alphaproteobacteria Devosia lucknowensis [FXWK] 1333464 1333389 - Trp CCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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