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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.319203 (9 seq.)
>WENV170654266
JRYK01051728
[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated
124
48
-
Ile
GAT
[ENA]
¢þ
>C181178962
CP029478
Gammaproteobacteria
Gammaproteobacteria bacterium ESL0073 [CP029478]
137972
138048
+
Ile
GAT
-
¡û
>C181178964
CP029478
Gammaproteobacteria
Gammaproteobacteria bacterium ESL0073 [CP029478]
234807
234883
+
Ile
GAT
-
¡û
>C181178967
CP029478
Gammaproteobacteria
Gammaproteobacteria bacterium ESL0073 [CP029478]
415922
415998
+
Ile
GAT
-
¡û
>C181178970
CP029478
Gammaproteobacteria
Gammaproteobacteria bacterium ESL0073 [CP029478]
614382
614458
+
Ile
GAT
-
¡û
>C191065637
CP029822
Gammaproteobacteria
Entomomonas moraniae QZS01 [CP029822]
2494770
2494694
-
Ile
GAT
-
¡û
>C191065639
CP029822
Gammaproteobacteria
Entomomonas moraniae QZS01 [CP029822]
2393637
2393561
-
Ile
GAT
-
¡û
>C191065642
CP029822
Gammaproteobacteria
Entomomonas moraniae QZS01 [CP029822]
2203345
2203269
-
Ile
GAT
-
¡û
>C191065645
CP029822
Gammaproteobacteria
Entomomonas moraniae QZS01 [CP029822]
2017141
2017065
-
Ile
GAT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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