This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.33023 (6 seq.)
>W131043766
AMPS01000173
Alphaproteobacteria
Acidocella sp. MX-AZ02 [AMPS]
3614
3703
+
Ser
TGA
[ENA]
¡û
>C08001608
CP001016
Alphaproteobacteria
Beijerinckia indica subsp. indica ATCC 9039 [CP001016]
2623984
2623898
-
Ser
TGA
[Ensembl]
¡û
>W141561195
JHYG01000005
Alphaproteobacteria
Acidocella facilis ATCC 35904 [JHYG]
137135
137046
-
Ser
TGA
[ENA]
¡û
>W1610041035
BANC01000015
Alphaproteobacteria
Acidocella aminolytica 101 = DSM 11237 [BANC]
20981
21070
+
Ser
TGA
[ENA]
¡û
>W1710038233
BANC01000015
Alphaproteobacteria
Acidocella aminolytica 101 = DSM 11237 [BANC]
20981
21070
+
Ser
TGA
[ENA]
¡û
>W1710584211
FQVJ01000032
Alphaproteobacteria
Acidocella aminolytica 101 = DSM 11237 [FQVJ]
30595
30684
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK