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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.330433 (11 seq.)
>VRL0100026
AB011503
Phycodnaviridae
Paramecium bursaria Chlorella virus EN5
1541
1615
+
Lys
CTT
[ENA]
¡û
>VRL0100034
AB011504
Phycodnaviridae
Paramecium bursaria Chlorella virus T16
559
633
+
Lys
CTT
[ENA]
¡û
>VRL0100059
U42580
Phycodnaviridae
Paramecium bursaria Chlorella virus 1
165300
165374
+
Lys
CTT
[ENA]
¡û
>VRL181000178
JX997162
Phycodnaviridae
Paramecium bursaria Chlorella virus CviKI (JX997162)
152436
152510
+
Lys
CTT
[ENA]
¡û
>VRL181000206
JX997165
Phycodnaviridae
Paramecium bursaria Chlorella virus CvsA1 (JX997165)
154280
154354
+
Lys
CTT
[ENA]
¡û
>VRL181000241
JX997169
Phycodnaviridae
Paramecium bursaria Chlorella virus IL-3A (JX997169)
159712
159786
+
Lys
CTT
[ENA]
¡û
>VRL181000255
JX997171
Phycodnaviridae
Paramecium bursaria Chlorella virus KS1B (JX997171)
129376
129450
+
Lys
CTT
[ENA]
¡û
>VRL181000266
JX997172
Phycodnaviridae
Paramecium bursaria Chlorella virus MA-1D (JX997172)
134788
134862
+
Lys
CTT
[ENA]
¡û
>VRL181000276
JX997173
Phycodnaviridae
Paramecium bursaria Chlorella virus MA-1E (JX997173)
158504
158578
+
Lys
CTT
[ENA]
¡û
>VRL181000321
JX997179
Phycodnaviridae
Paramecium bursaria Chlorella virus NE-JV-4 (JX997179)
167758
167832
+
Lys
CTT
[ENA]
¡û
>VRL181000323
JX997179
Phycodnaviridae
Paramecium bursaria Chlorella virus NE-JV-4 (JX997179)
168080
168154
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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