tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.334158 (130 seq.)
>W1710785701 LJIC01000015 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 227493 227418 - Lys CTT [ENA] ¡û
>W1710852980 LLWF02000003 Alphaproteobacteria Roseomonas mucosa [LLWF] 33690 33615 - Lys CTT [ENA] ¡û
>W1710893503 LNEV01000008 Alphaproteobacteria Rhizobiales bacterium Ga0077545 [LNEV] 172536 172611 + Lys CTT [ENA] ¡û
>W1711009541 LQQT01000045 Alphaproteobacteria Chelatococcus daeguensis [LQQT] 171636 171561 - Lys CTT [ENA] ¡û
>W1711179416 LWHQ01000017 Alphaproteobacteria Methylobacterium platani [LWHQ] 191647 191572 - Lys CTT [ENA] ¡û
>W1711179417 LWHQ01000017 Alphaproteobacteria Methylobacterium platani [LWHQ] 191467 191392 - Lys CTT [ENA] ¡û
>W1711262682 LYXZ01000079 Alphaproteobacteria Labrys sp. WJW [LYXZ] 6772 6697 - Lys CTT [ENA] ¡û
>W1711505935 MKVY01000042 Alphaproteobacteria Rhizobiales bacterium 65-9 [MKVY] 691 616 - Lys CTT [ENA] ¡û
>W1711511630 MLCO01000374 Alphaproteobacteria Pseudoroseomonas deserti M3 [MLCO] 1545 1620 + Lys CTT [ENA] ¡û
>W1711511631 MLCO01000374 Alphaproteobacteria Pseudoroseomonas deserti M3 [MLCO] 1677 1752 + Lys CTT [ENA] ¡û
>W1711783539 MVOD01000020 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 1068590 1068515 - Lys CTT [ENA] ¡û
>W131166446 ARCM01000001 Alphaproteobacteria Ancylobacter sp. FA202 [ARCM] 114306 114231 - Lys CTT [ENA] ¡û
>W131186371 ARWB01000001 Alphaproteobacteria Methylopila sp. M107 [ARWB] 1937804 1937729 - Lys CTT [ENA] ¡û
>W131222258 AUBC01000030 Alphaproteobacteria Salinarimonas rosea DSM 21201 [AUBC] 45843 45768 - Lys CTT [ENA] ¡û
>W131225085 AUDH01000006 Alphaproteobacteria Rubritepida flocculans DSM 14296 [AUDH] 167894 167819 - Lys CTT [ENA] ¡û
>C171032878 CP014674 Alphaproteobacteria Kozakia baliensis DSM 14400 [CP014674] 2884032 2884107 + Lys CTT - ¡û
>C171032938 CP014681 Alphaproteobacteria Kozakia baliensis NBRC 16680 [CP014681] 2540106 2540181 + Lys CTT - ¡û
>C171039563 CP015583 Alphaproteobacteria Roseomonas gilardii U14-5 [CP015583, CP015584] 2429456 2429381 - Lys CTT - ¡û
>C171072679 CP018095 Alphaproteobacteria Chelatococcus daeguensis TAD1 [CP018095] 2619876 2619801 - Lys CTT - ¡û
>C171131932 LT859959 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [LT859959] 1640858 1640933 + Lys CTT - ¡û
>C004061 CP000494 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [CP000494] 6260780 6260705 - Lys CTT [Ensembl] ¡û
>C004107 CU234118 Alphaproteobacteria Bradyrhizobium sp. ORS 278 ORS278 [CU234118] 5708355 5708280 - Lys CTT [Ensembl] ¡û
>C018987 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 2309175 2309250 + Lys CTT [Ensembl] ¡û
>w015387 AAPC01000001 Alphaproteobacteria Xanthobacter autotrophicus Py2 [AAPC] 800780 800708 - Lys CTT [ENA] ¡û
>WENV180074813 MPMA02168937 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 393 468 + Lys CTT [ENA] ¢þ
>WENV180092719 MPMF02278372 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 214 139 - Lys CTT [ENA] ¢þ
>WENV180357171 OBNM01043422 [OBNM] marine metagenome; none 182 257 + Lys CTT [ENA] ¢þ
>WENV181170936 OEIV010115020 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 500 425 - Lys CTT [ENA] ¢þ
>WENV181308036 OFIS01000124 [OFIS] sludge metagenome; sludge 65870 65795 - Lys CTT [ENA] ¢þ
>WENV181308221 OFIS01000927 [OFIS] sludge metagenome; sludge 9551 9626 + Lys CTT [ENA] ¢þ
>WENV181311341 OFJB01000927 [OFJB] sludge metagenome; sludge 118 43 - Lys CTT [ENA] ¢þ
>WENV181401924 OFTX01025020 [OFTX] sludge metagenome; sludge 46 121 + Lys CTT [ENA] ¢þ
>WENV181411472 OGCI01026976 [OGCI] hot springs metagenome; Hot spring water 1167 1092 - Lys CTT [ENA] ¢þ
>W141148497 AWXZ01000035 Alphaproteobacteria Lutibaculum baratangense AMV1 [AWXZ] 184656 184731 + Lys CTT [ENA] ¡û
>W141151385 AXBA01000017 Alphaproteobacteria Azorhizobium doebereinerae UFLA1-100 [AXBA] 29802 29877 + Lys CTT [ENA] ¡û
>W141194140 AYSU01000009 Alphaproteobacteria Rhodopseudomonas palustris JSC-3b [AYSU] 714700 714625 - Lys CTT [ENA] ¡û
>C08011434 CP000781 Alphaproteobacteria Xanthobacter autotrophicus Py2 [CP000781] 1530074 1530149 + Lys CTT [Ensembl] ¡û
>W141223334 BADD01000737 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 4152 4227 + Lys CTT [ENA] ¡û
>WENV182411640 OIFP01008928 [OIFP] human gut metagenome; stool 693 768 + Lys CTT [ENA] ¢þ
>W141240084 CAFK01000171 Alphaproteobacteria Bradyrhizobium sp. STM 3843 [CAFK] 19560 19635 + Lys CTT [ENA] ¡û
>W141276622 JADY01000002 Alphaproteobacteria Roseomonas gilardii subsp. rosea ATCC BAA-691 [JADY] 254743 254668 - Lys CTT [ENA] ¡û
>W141278836 JAFV01000001 Alphaproteobacteria Methylopila sp. 73B [JAFV] 1310349 1310274 - Lys CTT [ENA] ¡û
>WENV182955039 OKWB01008799 [OKWB] human gut metagenome; stool 259 334 + Lys CTT [ENA] ¢þ
>WENV182962913 OKWP01000002 [OKWP] human gut metagenome; stool 416513 416438 - Lys CTT [ENA] ¢þ
>WENV170004306 AGTN01632295 [AGTN] bioreactor metagenome; poplar biomass 355 280 - Lys CTT [ENA] ¢þ
>WENV170433882 CEUS01217912 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1132 1057 - Lys CTT [ENA] ¢þ
>WENV170552790 CXWK01002048 [CXWK] wastewater metagenome; activated sludge 4345 4270 - Lys CTT [ENA] ¢þ
>WENV170610609 FUWD011968178 [FUWD] metagenome; unknown 237 312 + Lys CTT [ENA] ¢þ
>WENV170705830 LNAP01000421 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 10229 10154 - Lys CTT [ENA] ¢þ
>WENV170771047 LXNI01000320 [LXNI] sponge metagenome; marine sponge reef 34156 34231 + Lys CTT [ENA] ¢þ
>WENV170906635 MDTE01041407 [MDTE] marine metagenome; seawater 555 480 - Lys CTT [ENA] ¢þ
>WENV170959316 MKWU01004142 [MKWU] sponge metagenome; 3776 3851 + Lys CTT [ENA] ¢þ
>WENV170959374 MKWU01004608 [MKWU] sponge metagenome; 2008 2083 + Lys CTT [ENA] ¢þ
>WENV170959812 MKWU01008624 [MKWU] sponge metagenome; 2500 2425 - Lys CTT [ENA] ¢þ
>WENV170960283 MKWU01022183 [MKWU] sponge metagenome; 2662 2587 - Lys CTT [ENA] ¢þ
>C181102004 CP024588 Alphaproteobacteria Roseomonas sp. FDAARGOS_362 [CP024588] 339665 339740 + Lys CTT - ¡û
>C181180103 CP029552 Alphaproteobacteria Methylobacterium sp. 17Sr1-1 [CP029552] 2898914 2898989 + Lys CTT - ¡û
>C181180104 CP029552 Alphaproteobacteria Methylobacterium sp. 17Sr1-1 [CP029552] 2899094 2899169 + Lys CTT - ¡û
>W141558698 JHWD01000002 Alphaproteobacteria Roseomonas mucosa ATCC BAA-692 [JHWD] 241566 241491 - Lys CTT [ENA] ¡û
>W09104117 AALJ01000005 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [AALJ] 141159 141234 + Lys CTT [ENA] ¡û
>W141730090 JNIB01000001 Alphaproteobacteria Xanthobacter sp. 91 [JNIB] 814447 814372 - Lys CTT [ENA] ¡û
>W1910006619 BAUX01000006 Alphaproteobacteria Methylopila sp. Yamaguchi [BAUX] 227442 227517 + Lys CTT [ENA] ¡û
>W1910568911 JHAA01000053 Alphaproteobacteria Rhodopseudomonas palustris PSBS [JHAA] 17399 17474 + Lys CTT [ENA] ¡û
>W1911702326 QOCQ01000027 Alphaproteobacteria Rhodospirillaceae bacterium SYSU D60007 [QOCQ] 975 900 - Lys CTT [ENA] ¡û
>W1911760561 QWVU01000013 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 124606 124681 + Lys CTT [ENA] ¡û
>W1911765960 QXDF01000001 Alphaproteobacteria Dichotomicrobium thermohalophilum DSM 5002 [QXDF] 1213428 1213503 + Lys CTT [ENA] ¡û
>W1911809190 QYYC01000050 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 70839 70914 + Lys CTT [ENA] ¡û
>W1810062300 PDOA01000001 Alphaproteobacteria Pseudoroseomonas aestuarii JR1/69-1-13 [PDOA] 253746 253821 + Lys CTT [ENA] ¡û
>W1810062346 PDOA01000090 Alphaproteobacteria Pseudoroseomonas aestuarii JR1/69-1-13 [PDOA] 52 127 + Lys CTT [ENA] ¡û
>W1810062347 PDOA01000090 Alphaproteobacteria Pseudoroseomonas aestuarii JR1/69-1-13 [PDOA] 314 389 + Lys CTT [ENA] ¡û
>W1810079871 PELK01000874 Alphaproteobacteria Methylobacterium frigidaeris IER25-16 [PELK] 2161 2236 + Lys CTT [ENA] ¡û
>W1810325506 PUEJ01000005 Alphaproteobacteria Labrys okinawensis RP1T [PUEJ] 251998 251923 - Lys CTT [ENA] ¡û
>W1810368593 PVZS01000009 Alphaproteobacteria Alsobacter soli SH9 [PVZS] 78516 78441 - Lys CTT [ENA] ¡û
>W1810672288 QJTI01000001 Alphaproteobacteria Rhodopseudomonas faecalis JCM 11668 [QJTI] 11807 11882 + Lys CTT [ENA] ¡û
>W1810679423 QKQS01000012 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 10191 10116 - Lys CTT [ENA] ¡û
>W1810787509 QRDT01000010 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 158665 158590 - Lys CTT [ENA] ¡û
>W1810884406 QUMP01000010 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 158665 158590 - Lys CTT [ENA] ¡û
>C151094770 CP012398 Alphaproteobacteria Chelatococcus sp. CO-6 [CP012398] 293220 293145 - Lys CTT - ¡û
>ENV09003167 ADGO01007989 Compost metagenome contig00001 549 474 - Lys CTT [ENA] ¡û
>W10110078 ADBQ01000004 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 33786 33711 - Lys CTT [ENA] ¡û
>W10112808 ADFI01000003 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 11229 11304 + Lys CTT [ENA] ¡û
>W10119183 ADVL01001015 Alphaproteobacteria Pseudoroseomonas cervicalis ATCC 49957 [ADVL] 1318 1393 + Lys CTT [ENA] ¡û
>C10112212 CP002026 Alphaproteobacteria Ancylobacter novellus DSM 506 [CP002026] 2389950 2389875 - Lys CTT [Ensembl] ¡û
>W11112515 ADBQ01000004 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 33786 33711 - Lys CTT [ENA] ¡û
>W1510766215 JANX01000159 Alphaproteobacteria Inquilinus limosus MP06 [JANX] 4962 5037 + Lys CTT [ENA] ¡û
>W11116035 ADFI01000003 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 11229 11304 + Lys CTT [ENA] ¡û
>C11118771 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 3699925 3699850 - Lys CTT [Ensembl] ¡û
>W11125403 ADVL01001015 Alphaproteobacteria Pseudoroseomonas cervicalis ATCC 49957 [ADVL] 1318 1393 + Lys CTT [ENA] ¡û
>W1511507863 JXOD01000030 Alphaproteobacteria Methylobacterium platani JCM 14648 [JXOD] 1667 1742 + Lys CTT [ENA] ¡û
>W1511507864 JXOD01000030 Alphaproteobacteria Methylobacterium platani JCM 14648 [JXOD] 1847 1922 + Lys CTT [ENA] ¡û
>W1511563246 LABX01000129 Alphaproteobacteria Methylobacterium aquaticum DSM 16371 [LABX] 40705 40630 - Lys CTT [ENA] ¡û
>W1511563247 LABX01000129 Alphaproteobacteria Methylobacterium aquaticum DSM 16371 [LABX] 40525 40450 - Lys CTT [ENA] ¡û
>W1511563282 LABY01000001 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 38624 38549 - Lys CTT [ENA] ¡û
>W1511563283 LABY01000001 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 38449 38374 - Lys CTT [ENA] ¡û
>W1511563398 LABZ01000264 Alphaproteobacteria Methylobacterium tarhaniae DSM 25844 [LABZ] 20172 20247 + Lys CTT [ENA] ¡û
>W1511563399 LABZ01000264 Alphaproteobacteria Methylobacterium tarhaniae DSM 25844 [LABZ] 20351 20426 + Lys CTT [ENA] ¡û
>WENV057421 AACY023294262 Marine microbial communities from Global Ocean Sampling (GOS) 291 214 - Lys CTT [ENA]
>W121110808 ALIQ01000230 Alphaproteobacteria Chelatococcus sp. GW1 [ALIQ] 40627 40702 + Lys CTT [ENA] ¡û
>W121113849 ALOX01000053 Alphaproteobacteria Roseomonas sp. B5 [ALOX] 33713 33638 - Lys CTT [ENA] ¡û
>W121127093 CAFH01000230 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [CAFH] 19006 18931 - Lys CTT [ENA] ¡û
>W121127138 CAFI01000306 Alphaproteobacteria Bradyrhizobium sp. ORS 375 [CAFI] 11313 11388 + Lys CTT [ENA] ¡û
>W121127153 CAFJ01000028 Alphaproteobacteria Bradyrhizobium sp. STM 3809 [CAFJ] 6322 6397 + Lys CTT [ENA] ¡û
>W1610047416 BBDG01001438 Alphaproteobacteria Methylobacterium platani JCM 14648 [BBDG] 489 414 - Lys CTT [ENA] ¡û
>W1610047417 BBDG01001438 Alphaproteobacteria Methylobacterium platani JCM 14648 [BBDG] 309 234 - Lys CTT [ENA] ¡û
>W1610590506 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16561 16486 - Lys CTT [ENA] ¡û
>W1610590507 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16386 16311 - Lys CTT [ENA] ¡û
>W1610590508 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16215 16140 - Lys CTT [ENA] ¡û
>W1610590560 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30025 30100 + Lys CTT [ENA] ¡û
>W1610590561 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30200 30275 + Lys CTT [ENA] ¡û
>W1610590562 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30371 30446 + Lys CTT [ENA] ¡û
>W1610631740 LIOL01000001 Alphaproteobacteria Chelatococcus sambhunathii [LIOL] 171479 171404 - Lys CTT [ENA] ¡û
>W1610649507 LJIC01000015 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 227493 227418 - Lys CTT [ENA] ¡û
>W1610753769 LNEV01000008 Alphaproteobacteria Rhizobiales bacterium Ga0077545 [LNEV] 172536 172611 + Lys CTT [ENA] ¡û
>W1610858061 LQQT01000045 Alphaproteobacteria Chelatococcus daeguensis [LQQT] 171636 171561 - Lys CTT [ENA] ¡û
>W1610987317 LWHQ01000017 Alphaproteobacteria Methylobacterium platani [LWHQ] 191647 191572 - Lys CTT [ENA] ¡û
>W1610987318 LWHQ01000017 Alphaproteobacteria Methylobacterium platani [LWHQ] 191467 191392 - Lys CTT [ENA] ¡û
>W1611024549 LYXZ01000079 Alphaproteobacteria Labrys sp. WJW [LYXZ] 6772 6697 - Lys CTT [ENA] ¡û
>W1710044021 BBDG01001438 Alphaproteobacteria Methylobacterium platani JCM 14648 [BBDG] 489 414 - Lys CTT [ENA] ¡û
>W1710044022 BBDG01001438 Alphaproteobacteria Methylobacterium platani JCM 14648 [BBDG] 309 234 - Lys CTT [ENA] ¡û
>W1710084261 BDLP01000016 Alphaproteobacteria Roseomonas sp. TAS13 [BDLP] 8823 8898 + Lys CTT [ENA] ¡û
>W1710505284 FMTP01000001 Alphaproteobacteria Ancylobacter rudongensis [FMTP] 435252 435327 + Lys CTT [ENA] ¡û
>W1710548830 FOEB01000011 Alphaproteobacteria Methylobacterium sp. ap11 [FOEB] 89381 89306 - Lys CTT [ENA] ¡û
>W1710548831 FOEB01000011 Alphaproteobacteria Methylobacterium sp. ap11 [FOEB] 89010 88935 - Lys CTT [ENA] ¡û
>W1710709786 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16561 16486 - Lys CTT [ENA] ¡û
>W1710709787 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16386 16311 - Lys CTT [ENA] ¡û
>W1710709788 LDRM01000116 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 16215 16140 - Lys CTT [ENA] ¡û
>W1710709840 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30025 30100 + Lys CTT [ENA] ¡û
>W1710709841 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30200 30275 + Lys CTT [ENA] ¡û
>W1710709842 LDRN01000072 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 30371 30446 + Lys CTT [ENA] ¡û
>W1710764625 LIOL01000001 Alphaproteobacteria Chelatococcus sambhunathii [LIOL] 171479 171404 - Lys CTT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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