Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.338616 (141 seq.)
	>W1711093690	LTFF01000055	Actinomycetota	Olsenella sp. HMSC062G07 [LTFF]	15251	15326	+	Thr	GGT	[ENA]	○
	>W131001327	AGXC01000001	Actinomycetota	Atopobium minutum 10063974 [AGXC]	400315	400390	+	Thr	GGT	[ENA]	○
	>WENV180004557	FLRS01022847	[FLRS] metagenome; saliva		139	214	+	Thr	GGT	[ENA]	○
	>WENV180008841	FLSB01178188	[FLSB] metagenome; saliva		5922	5847	-	Thr	GGT	[ENA]	○
	>WENV180009639	FLSC01033305	[FLSC] metagenome; saliva		1055	980	-	Thr	GGT	[ENA]	○
	>WENV180011594	FLSK01006716	[FLSK] metagenome; saliva		612	537	-	Thr	GGT	[ENA]	○
	>WENV180173123	OAVY01010685	[OAVY] human gut metagenome; faeces		78	3	-	Thr	GGT	[ENA]	○
	>WENV180349538	OBLO01058072	[OBLO] metagenome; feces		294	219	-	Thr	GGT	[ENA]	○
	>WENV180412640	OBVA01005087	[OBVA] human gut metagenome; faeces		419	344	-	Thr	GGT	[ENA]	○
	>WENV180483829	OBZH01002978	[OBZH] human gut metagenome; faeces		3647	3572	-	Thr	GGT	[ENA]	○
	>WENV180550162	OCIZ01025799	[OCIZ] human oral metagenome; human oral		204	129	-	Thr	GGT	[ENA]	○
	>WENV180596845	OCPI01010440	[OCPI] human gut metagenome; faeces		150	225	+	Thr	GGT	[ENA]	○
	>WENV180705383	ODEJ01003796	[ODEJ] human metagenome; G_DNA_Tongue dorsum		4312	4237	-	Thr	GGT	[ENA]	○
	>WENV180708565	ODFJ01003100	[ODFJ] human metagenome; G_DNA_Tongue dorsum		860	935	+	Thr	GGT	[ENA]	○
	>WENV180719792	ODGJ01005823	[ODGJ] human metagenome; G_DNA_Tongue dorsum		4352	4277	-	Thr	GGT	[ENA]	○
	>WENV180721326	ODGK01075724	[ODGK] human metagenome; G_DNA_Palatine Tonsils		43	118	+	Thr	GGT	[ENA]	○
	>WENV180724474	ODGR01000907	[ODGR] human metagenome; G_DNA_Tongue dorsum		20194	20119	-	Thr	GGT	[ENA]	○
	>WENV180728490	ODGU01053370	[ODGU] human metagenome; G_DNA_Supragingival plaque		185	260	+	Thr	GGT	[ENA]	○
	>WENV180735214	ODGZ01097145	[ODGZ] human metagenome; G_DNA_Supragingival plaque		341	266	-	Thr	GGT	[ENA]	○
	>WENV180758008	ODHW01004300	[ODHW] human metagenome; G_DNA_Tongue dorsum		602	677	+	Thr	GGT	[ENA]	○
	>WENV180763034	ODIA01000036	[ODIA] human metagenome; G_DNA_Tongue dorsum		40145	40220	+	Thr	GGT	[ENA]	○
	>WENV180769314	ODIG01054415	[ODIG] human metagenome; G_DNA_Tongue dorsum		607	532	-	Thr	GGT	[ENA]	○
	>WENV180773957	ODIJ01004929	[ODIJ] human metagenome; G_DNA_Tongue dorsum		646	721	+	Thr	GGT	[ENA]	○
	>WENV180776180	ODIK01020542	[ODIK] human metagenome; G_DNA_Tongue dorsum		791	716	-	Thr	GGT	[ENA]	○
	>WENV180779566	ODIN01007239	[ODIN] human metagenome; G_DNA_Throat		1557	1482	-	Thr	GGT	[ENA]	○
	>WENV180783281	ODIQ01003786	[ODIQ] human metagenome; G_DNA_Tongue dorsum		4273	4198	-	Thr	GGT	[ENA]	○
	>WENV180788195	ODIS01037944	[ODIS] human metagenome; G_DNA_Supragingival plaque		920	995	+	Thr	GGT	[ENA]	○
	>WENV180790557	ODIT01018769	[ODIT] human metagenome; G_DNA_Tongue dorsum		971	896	-	Thr	GGT	[ENA]	○
	>WENV180792909	ODIW01003775	[ODIW] human metagenome; G_DNA_Tongue dorsum		86	161	+	Thr	GGT	[ENA]	○
	>WENV180794670	ODIZ01003378	[ODIZ] human metagenome; G_DNA_Tongue dorsum		4352	4277	-	Thr	GGT	[ENA]	○
	>WENV180796891	ODJB01017769	[ODJB] human metagenome; G_DNA_Supragingival plaque		1054	979	-	Thr	GGT	[ENA]	○
	>WENV180802624	ODJE01004619	[ODJE] human metagenome; G_DNA_Tongue dorsum		242	317	+	Thr	GGT	[ENA]	○
	>WENV180809945	ODJK01075424	[ODJK] human metagenome; G_DNA_Subgingival plaque		73	148	+	Thr	GGT	[ENA]	○
	>WENV180815305	ODJP01000184	[ODJP] human metagenome; G_DNA_Tongue dorsum		20119	20044	-	Thr	GGT	[ENA]	○
	>WENV180820327	ODJR01004506	[ODJR] human metagenome; G_DNA_Tongue dorsum		601	676	+	Thr	GGT	[ENA]	○
	>WENV180830425	ODKB01003049	[ODKB] human metagenome; G_DNA_Tongue dorsum		108	183	+	Thr	GGT	[ENA]	○
	>WENV180854455	ODKX01003714	[ODKX] human metagenome; G_DNA_Tongue dorsum		5781	5706	-	Thr	GGT	[ENA]	○
	>WENV180856401	ODKZ01013592	[ODKZ] human metagenome; G_DNA_Tongue dorsum		388	463	+	Thr	GGT	[ENA]	○
	>WENV180861472	ODLE01004280	[ODLE] human metagenome; G_DNA_Tongue dorsum		563	638	+	Thr	GGT	[ENA]	○
	>WENV180864527	ODLH01057195	[ODLH] human metagenome; G_DNA_Tongue dorsum		136	61	-	Thr	GGT	[ENA]	○
	>WENV180866065	ODLJ01003950	[ODLJ] human metagenome; G_DNA_Tongue dorsum		4353	4278	-	Thr	GGT	[ENA]	○
	>WENV180873316	ODLP01003369	[ODLP] human metagenome; G_DNA_Tongue dorsum		2091	2166	+	Thr	GGT	[ENA]	○
	>WENV180874754	ODLQ01005298	[ODLQ] human metagenome; G_DNA_Tongue dorsum		521	596	+	Thr	GGT	[ENA]	○
	>WENV180879918	ODLZ01003740	[ODLZ] human metagenome; G_DNA_Tongue dorsum		6098	6023	-	Thr	GGT	[ENA]	○
	>WENV180883398	ODMC01004687	[ODMC] human metagenome; G_DNA_Tongue dorsum		5871	5796	-	Thr	GGT	[ENA]	○
	>WENV180889649	ODMN01085468	[ODMN] human metagenome; G_DNA_Supragingival plaque		450	375	-	Thr	GGT	[ENA]	○
	>WENV180890700	ODMO01010100	[ODMO] human metagenome; G_DNA_Tongue dorsum		234	309	+	Thr	GGT	[ENA]	○
	>WENV180897023	ODNI01005330	[ODNI] human metagenome; G_DNA_Tongue dorsum		234	309	+	Thr	GGT	[ENA]	○
	>WENV180899991	ODOJ01000218	[ODOJ] human metagenome; G_DNA_Tongue dorsum		52324	52249	-	Thr	GGT	[ENA]	○
	>WENV180901396	ODOK01000039	[ODOK] human metagenome; G_DNA_Tongue dorsum		36904	36829	-	Thr	GGT	[ENA]	○
	>WENV180917619	ODTD01053316	[ODTD] human metagenome; G_DNA_Tongue dorsum		125	50	-	Thr	GGT	[ENA]	○
	>WENV180920593	ODTH01010765	[ODTH] human metagenome; G_DNA_Tongue dorsum		600	675	+	Thr	GGT	[ENA]	○
	>WENV180929612	ODTN01006513	[ODTN] human metagenome; G_DNA_Tongue dorsum		234	309	+	Thr	GGT	[ENA]	○
	>WENV180931911	ODTP01014782	[ODTP] human metagenome; G_DNA_Tongue dorsum		1443	1368	-	Thr	GGT	[ENA]	○
	>WENV180939780	ODTX01088818	[ODTX] human metagenome; G_DNA_Supragingival plaque		221	296	+	Thr	GGT	[ENA]	○
	>WENV180944769	ODUC01034103	[ODUC] human metagenome; G_DNA_Supragingival plaque		466	391	-	Thr	GGT	[ENA]	○
	>WENV180949153	ODUG01009110	[ODUG] human metagenome; G_DNA_Tongue dorsum		575	650	+	Thr	GGT	[ENA]	○
	>WENV180952593	ODUI01000552	[ODUI] human metagenome; G_DNA_Tongue dorsum		16373	16298	-	Thr	GGT	[ENA]	○
	>WENV180954937	ODUJ01016516	[ODUJ] human metagenome; G_DNA_Tongue dorsum		1357	1282	-	Thr	GGT	[ENA]	○
	>WENV180959107	ODUM01000073	[ODUM] human metagenome; G_DNA_Tongue dorsum		74099	74024	-	Thr	GGT	[ENA]	○
	>WENV180968124	ODUT01010657	[ODUT] human metagenome; G_DNA_Tongue dorsum		273	348	+	Thr	GGT	[ENA]	○
	>WENV180976259	ODUY01068797	[ODUY] human metagenome; G_DNA_Supragingival plaque		80	155	+	Thr	GGT	[ENA]	○
	>WENV180982210	ODVE01215848	[ODVE] human metagenome; G_DNA_Supragingival plaque		252	177	-	Thr	GGT	[ENA]	○
	>WENV180985715	ODVJ01013189	[ODVJ] human metagenome; G_DNA_Tongue dorsum		1526	1451	-	Thr	GGT	[ENA]	○
	>WENV180988928	ODVL01020608	[ODVL] human metagenome; G_DNA_Tongue dorsum		714	639	-	Thr	GGT	[ENA]	○
	>WENV180990075	ODVN01000349	[ODVN] human metagenome; G_DNA_Tongue dorsum		45136	45211	+	Thr	GGT	[ENA]	○
	>WENV180998364	ODVT01000246	[ODVT] human metagenome; G_DNA_Buccal mucosa		9506	9581	+	Thr	GGT	[ENA]	○
	>WENV181013756	ODWN01003619	[ODWN] human metagenome; G_DNA_Tongue dorsum		5819	5744	-	Thr	GGT	[ENA]	○
	>WENV181016633	ODWR01003497	[ODWR] human metagenome; G_DNA_Tongue dorsum		4352	4277	-	Thr	GGT	[ENA]	○
	>WENV181020256	ODWU01093181	[ODWU] human metagenome; G_DNA_Supragingival plaque		351	276	-	Thr	GGT	[ENA]	○
	>WENV181021095	ODWV01002200	[ODWV] human metagenome; G_DNA_Tongue dorsum		987	1062	+	Thr	GGT	[ENA]	○
	>WENV181027960	ODXD01156660	[ODXD] human metagenome; G_DNA_Buccal mucosa		173	98	-	Thr	GGT	[ENA]	○
	>WENV181032774	ODXN01000620	[ODXN] human metagenome; G_DNA_Tongue dorsum		20317	20242	-	Thr	GGT	[ENA]	○
	>WENV181038830	ODXQ01005111	[ODXQ] human metagenome; G_DNA_Tongue dorsum		6200	6125	-	Thr	GGT	[ENA]	○
	>WENV181041058	ODXS01003649	[ODXS] human metagenome; G_DNA_Tongue dorsum		5784	5709	-	Thr	GGT	[ENA]	○
	>WENV181045667	ODXW01000966	[ODXW] human metagenome; G_DNA_Tongue dorsum		14504	14429	-	Thr	GGT	[ENA]	○
	>WENV181052339	ODYE01127725	[ODYE] human metagenome; G_DNA_Tongue dorsum		113	38	-	Thr	GGT	[ENA]	○
	>WENV181057716	ODYL01000832	[ODYL] human metagenome; G_DNA_Tongue dorsum		14135	14210	+	Thr	GGT	[ENA]	○
	>WENV181067843	ODZI01060754	[ODZI] human metagenome; G_DNA_Supragingival plaque		29	104	+	Thr	GGT	[ENA]	○
	>WENV181069105	ODZZ01011446	[ODZZ] human metagenome; G_DNA_Tongue dorsum		947	872	-	Thr	GGT	[ENA]	○
	>WENV181073483	OEAO01000310	[OEAO] human metagenome; G_DNA_Tongue dorsum		5968	5893	-	Thr	GGT	[ENA]	○
	>WENV181086301	OEAY01000339	[OEAY] human metagenome; G_DNA_Tongue dorsum		9789	9864	+	Thr	GGT	[ENA]	○
	>WENV181091645	OEBC01065260	[OEBC] human metagenome; G_DNA_Supragingival plaque		412	337	-	Thr	GGT	[ENA]	○
	>WENV181095203	OEBY01004268	[OEBY] human metagenome; G_DNA_Tongue dorsum		4352	4277	-	Thr	GGT	[ENA]	○
	>WENV181097341	OECA01006417	[OECA] human metagenome; G_DNA_Tongue dorsum		585	660	+	Thr	GGT	[ENA]	○
	>WENV181102032	OECT01000683	[OECT] human metagenome; G_DNA_Tongue dorsum		15277	15202	-	Thr	GGT	[ENA]	○
	>WENV181104813	OEED01000207	[OEED] human metagenome; G_DNA_Tongue dorsum		2288	2363	+	Thr	GGT	[ENA]	○
	>WENV181109207	OEEJ01014855	[OEEJ] human metagenome; G_DNA_Tongue dorsum		1011	936	-	Thr	GGT	[ENA]	○
	>WENV181112314	OEEL01000375	[OEEL] human metagenome; G_DNA_Tongue dorsum		32133	32058	-	Thr	GGT	[ENA]	○
	>WENV181115115	OEEO01022642	[OEEO] human metagenome; G_DNA_Supragingival plaque		957	882	-	Thr	GGT	[ENA]	○
	>WENV181124730	OEFT01001138	[OEFT] human metagenome; G_DNA_Tongue dorsum		7409	7484	+	Thr	GGT	[ENA]	○
	>WENV181128864	OEFX01000381	[OEFX] human metagenome; G_DNA_Tongue dorsum		14677	14602	-	Thr	GGT	[ENA]	○
	>WENV181130692	OEFY01043218	[OEFY] human metagenome; G_DNA_Throat		125	50	-	Thr	GGT	[ENA]	○
	>WENV181135179	OEGG01004943	[OEGG] human metagenome; G_DNA_Tongue dorsum		412	487	+	Thr	GGT	[ENA]	○
	>WENV181138587	OEGN01000224	[OEGN] human metagenome; G_DNA_Tongue dorsum		1621	1696	+	Thr	GGT	[ENA]	○
	>WENV181141631	OEGT01011078	[OEGT] human metagenome; G_DNA_Throat		910	835	-	Thr	GGT	[ENA]	○
	>WENV181150459	OEHW01002779	[OEHW] human metagenome; G_DNA_Tongue dorsum		8693	8768	+	Thr	GGT	[ENA]	○
	>WENV181175747	OEJQ01027454	[OEJQ] human metagenome; G_DNA_Tongue dorsum		489	564	+	Thr	GGT	[ENA]	○
	>WENV181218328	OFCM01000172	[OFCM] metagenome; Human gut stool		242	317	+	Thr	GGT	[ENA]	○
	>WENV181222395	OFDA01003233	[OFDA] metagenome; Human gut stool		725	650	-	Thr	GGT	[ENA]	○
	>W141145457	AWUP01000005	Actinomycetota	Coriobacteriaceae bacterium BV3Ac1 [AWUP]	168950	168875	-	Thr	GGT	[ENA]	○
	>W141145501	AWUQ01000004	Actinomycetota	Atopobium sp. BV3Ac4 [AWUQ]	179308	179233	-	Thr	GGT	[ENA]	○
	>W141170347	AXXR01000003	Actinomycetota	Atopobium fossor DSM 15642 [AXXR]	256930	256855	-	Thr	GGT	[ENA]	○
	>WENV181723645	OGPW01012244	[OGPW] human gut metagenome; faeces		1996	2071	+	Thr	GGT	[ENA]	○
	>WENV181801496	OGSB01000401	[OGSB] human gut metagenome; fecal sample 5 from infant 3		10404	10479	+	Thr	GGT	[ENA]	○
	>WENV181810626	OGSV01000498	[OGSV] human gut metagenome; fecal sample 4 from infant 3		2713	2638	-	Thr	GGT	[ENA]	○
	>WENV181916924	OGYG01000916	[OGYG] human gut metagenome; faeces		702	777	+	Thr	GGT	[ENA]	○
	>WENV181996327	OHAU01000003	[OHAU] human gut metagenome; faeces		91	16	-	Thr	GGT	[ENA]	○
	>WENV182815906	OJYV01000026	[OJYV] human gut metagenome; human gut		4396	4321	-	Thr	GGT	[ENA]	○
	>WENV182860009	OKOR01000001	[OKOR] human gut metagenome; human gut		204904	204979	+	Thr	GGT	[ENA]	○
	>WENV182874133	OKRW01003846	[OKRW] human gut metagenome; faeces		2157	2232	+	Thr	GGT	[ENA]	○
	>WENV182941241	OKVG01000852	[OKVG] human gut metagenome; human gut		6093	6018	-	Thr	GGT	[ENA]	○
	>WENV182943770	OKVI01000787	[OKVI] human gut metagenome; human gut		10315	10390	+	Thr	GGT	[ENA]	○
	>WENV183097204	OLNE01001112	[OLNE] human gut metagenome; faeces		11420	11495	+	Thr	GGT	[ENA]	○
	>WENV183108702	OLNN01000563	[OLNN] human gut metagenome; faeces		3125	3050	-	Thr	GGT	[ENA]	○
	>WENV183146068	OLOM01002990	[OLOM] human gut metagenome; faeces		8308	8233	-	Thr	GGT	[ENA]	○
	>WENV183364272	OLXM01009608	[OLXM] human gut metagenome; feces		1956	1881	-	Thr	GGT	[ENA]	○
	>W141382696	JDFG01000028	Actinomycetota	Atopobium sp. BS2 [JDFG]	53436	53511	+	Thr	GGT	[ENA]	○
	>W141382728	JDFH01000002	Actinomycetota	Atopobium sp. ICM42b [JDFH]	115074	114999	-	Thr	GGT	[ENA]	○
	>WENV170540091	CWGU01000037	[CWGU] human gut metagenome; ENVO:feces		6361	6286	-	Thr	GGT	[ENA]	○
	>WENV170540272	CWGY01000008	[CWGY] human gut metagenome; ENVO:feces		47865	47940	+	Thr	GGT	[ENA]	○
	>C191007298	AP019367	Actinomycetota	Parolsenella catena JCM 31932 [AP019367]	205442	205517	+	Thr	GGT	-	○
	>C151090420	CP012069	Actinomycetota	Olsenella sp. oral taxon 807 F0089 [CP012069]	2104199	2104124	-	Thr	GGT	-	○
	>W2010160450	CAAKON010000053	Actinomycetota	Olsenella uli [CAAKON]	47865	47940	+	Thr	GGT	[ENA]	○
	>W2010274091	CABKVE020000013	Actinomycetota	Atopobiaceae bacterium [CABKVE]	613018	613093	+	Thr	GGT	[ENA]	○
	>W2010275341	CABKWA020000002	Actinomycetota	Olegusella massiliensis [CABKWA]	711866	711791	-	Thr	GGT	[ENA]	○
	>W2012155490	VUNC01000001	Actinomycetota	Olsenella sp. CA-Schmier-601-WT-1 [VUNC]	317603	317678	+	Thr	GGT	[ENA]	○
	>C231378342	CP097092	Actinomycetota	Lancefieldella parvula [CP097092]	1389341	1389266	-	Thr	GGT	-	○
	>C10100628	CP001721	Actinomycetota	Lancefieldella parvula DSM 20469 [CP001721]	1319252	1319177	-	Thr	GGT	[Ensembl]	○
	>W1511351326	JRND01000017	Actinomycetota	Lancefieldella parvula DNF00906 [JRND]	64873	64798	-	Thr	GGT	[ENA]	○
	>C161035147	CP011402	Actinomycetota	Denitrobacterium detoxificans NPOH1 [CP011402]	1684525	1684450	-	Thr	GGT	[Ensembl]	○
	>W1610120957	CZPU01000014	Actinomycetota	Olsenella massiliensis SIT9 [CZPU]	613018	613093	+	Thr	GGT	[ENA]	○
	>W1610502746	FLLS01000002	Actinomycetota	Olegusella massiliensis KHD7 [FLLS]	711866	711791	-	Thr	GGT	[ENA]	○
	>W1610528820	JQBO01000003	Actinomycetota	Atopobium minutum [JQBO]	756469	756394	-	Thr	GGT	[ENA]	○
	>W1710123661	CZPU01000014	Actinomycetota	Olsenella massiliensis SIT9 [CZPU]	613018	613093	+	Thr	GGT	[ENA]	○
	>W1710496145	FLLS01000002	Actinomycetota	Olegusella massiliensis KHD7 [FLLS]	711866	711791	-	Thr	GGT	[ENA]	○
	>W1710535095	FNSH01000001	Actinomycetota	Atopobium minutum [FNSH]	776363	776288	-	Thr	GGT	[ENA]	○
	>W1710540417	FNWT01000004	Actinomycetota	Parafannyhessea umbonata [FNWT]	176952	176877	-	Thr	GGT	[ENA]	○
	>W1710552091	FOGP01000003	Actinomycetota	Parafannyhessea umbonata [FOGP]	244499	244424	-	Thr	GGT	[ENA]	○
	>W1710600628	FUWQ01000004	Actinomycetota	Olsenella sp. KH1P3 KH1P3 [FUWQ]	29746	29821	+	Thr	GGT	[ENA]	○
	>W1710630410	JQBO01000003	Actinomycetota	Atopobium minutum [JQBO]	756469	756394	-	Thr	GGT	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK