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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.339684 (9 seq.)
>W1711419240
MHMU01000034
Unclassified
Candidatus Portnoybacteria bacterium RBG_13_40_8 [MHMU]
1711
1636
-
Arg
TCG
[ENA]
¡û
>W1910736158
MHMZ01000029
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12 [MHMZ]
15016
14941
-
Arg
TCG
[ENA]
¡û
>W1910736213
MHNB01000026
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_12_FULL_38_9 [MHNB]
11569
11494
-
Arg
TCG
[ENA]
¡û
>W1910736259
MHND01000011
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_01_FULL_38_39 [MHND]
14939
14864
-
Arg
TCG
[ENA]
¡û
>W1910736385
MHNH01000024
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_12_FULL_39_9 [MHNH]
15051
14976
-
Arg
TCG
[ENA]
¡û
>W2010869588
MHMZ01000029
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12 [MHMZ]
15016
14941
-
Arg
TCG
[ENA]
¡û
>W2010869643
MHNB01000026
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_12_FULL_38_9 [MHNB]
11569
11494
-
Arg
TCG
[ENA]
¡û
>W2010869689
MHND01000011
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_01_FULL_38_39 [MHND]
14939
14864
-
Arg
TCG
[ENA]
¡û
>W2010869815
MHNH01000024
Unclassified
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_12_FULL_39_9 [MHNH]
15051
14976
-
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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