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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.339745 (69 seq.)
>W1710809614
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
91651
91579
-
Glu
TTC
[ENA]
¡û
>W1711055058
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
12165
12237
+
Glu
TTC
[ENA]
¡û
>W1711088451
LSYX01000101
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
9489
9417
-
Glu
TTC
[ENA]
¡û
>W1711258832
LYUV01000061
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1711258865
LYUW01000060
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1711258900
LYUX01000064
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1711258934
LYUY01000068
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1711466308
MJMG01000001
Alphaproteobacteria
Wolbachia pipientis [MJMG]
272331
272403
+
Glu
TTC
[ENA]
¡û
>W1711745719
MUJL01000115
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
32092
32020
-
Glu
TTC
[ENA]
¡û
>W1711745746
MUJM01000084
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
7129
7057
-
Glu
TTC
[ENA]
¡û
>W1712108430
NJBR01000029
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
27620
27547
-
Glu
TTC
[ENA]
¡û
>W131052821
AMZJ01000064
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
14738
14810
+
Glu
TTC
[ENA]
¡û
>W131242644
CAOH01000082
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
116059
116131
+
Glu
TTC
[ENA]
¡û
>W131243125
CAOU02000038
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
15576
15504
-
Glu
TTC
[ENA]
¡û
>C026838
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
1159680
1159609
-
Glu
TTC
[Ensembl]
¡û
>C026868
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
921301
921230
-
Glu
TTC
[Ensembl]
¡û
>w016807
AAQP01000179
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
526
450
-
Glu
TTC
[ENA]
¡û
>w005426
AAGC01000132
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans [AAGC]
648
572
-
Glu
TTC
[ENA]
¡û
>w005391
AAGB01000004
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae [AAGB]
11713
11789
+
Glu
TTC
[ENA]
¡û
>W141065611
AQQE01000003
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
28974
28902
-
Glu
TTC
[ENA]
¡û
>WENV181405237
OGCC01000406
[OGCC] insect metagenome; haemolymph
270
342
+
Glu
TTC
[ENA]
¢þ
>WENV181405271
OGCD01000002
[OGCD] insect metagenome; haemolymph
20762
20690
-
Glu
TTC
[ENA]
¢þ
>WENV181406095
OGCF01000114
[OGCF] insect metagenome; haemolymph
4031
3959
-
Glu
TTC
[ENA]
¢þ
>W141145102
AWUH01000169
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
6376
6304
-
Glu
TTC
[ENA]
¡û
>W141240228
CAGB01000125
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
4548
4476
-
Glu
TTC
[ENA]
¡û
>C08011415
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1031071
1030999
-
Glu
TTC
[Ensembl]
¡û
>C181017546
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
27912
27984
+
Glu
TTC
-
¡û
>C191074348
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
95194
95122
-
Glu
TTC
-
¡û
>C191123116
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
253828
253755
-
Glu
TTC
-
¡û
>C191123159
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
54402
54330
-
Glu
TTC
-
¡û
>C191123193
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
54403
54331
-
Glu
TTC
-
¡û
>C191188735
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
183469
183397
-
Glu
TTC
-
¡û
>W09113851
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
254956
254884
-
Glu
TTC
[ENA]
¡û
>W09121821
ACFP01000226
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
8676
8748
+
Glu
TTC
[ENA]
¡û
>W141812293
JQAM01000036
Alphaproteobacteria
Wolbachia pipientis [JQAM]
69500
69428
-
Glu
TTC
[ENA]
¡û
>W1910213476
FMKF01000249
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
893
965
+
Glu
TTC
[ENA]
¡û
>C09111269
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
1281863
1281791
-
Glu
TTC
[Ensembl]
¡û
>W1910753968
MKIF01000096
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
7138
7066
-
Glu
TTC
[ENA]
¡û
>W1910759049
MLZJ01000168
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
6830
6902
+
Glu
TTC
[ENA]
¡û
>W1910760295
MNCG01000167
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
6830
6902
+
Glu
TTC
[ENA]
¡û
>W1910794349
MRWX01000006
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
17316
17388
+
Glu
TTC
[ENA]
¡û
>W1910802370
MSYL01000290
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
6758
6830
+
Glu
TTC
[ENA]
¡û
>W1911239454
NSDR01000057
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
15352
15280
-
Glu
TTC
[ENA]
¡û
>W1911239505
NSDS01000097
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
5378
5306
-
Glu
TTC
[ENA]
¡û
>W1911239525
NSDT01000057
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
15352
15280
-
Glu
TTC
[ENA]
¡û
>W1911281131
NTHL01000088
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
16215
16143
-
Glu
TTC
[ENA]
¡û
>W1911412152
NWVH01000041
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
8180
8252
+
Glu
TTC
[ENA]
¡û
>W1911412184
NWVI01000026
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
4570
4498
-
Glu
TTC
[ENA]
¡û
>W1911412212
NWVI01000170
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
5096
5168
+
Glu
TTC
[ENA]
¡û
>W1911412239
NWVJ01000053
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
3870
3798
-
Glu
TTC
[ENA]
¡û
>W1911412273
NWVK01000031
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
5445
5517
+
Glu
TTC
[ENA]
¡û
>W1810758342
QPIP01000022
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
15406
15334
-
Glu
TTC
[ENA]
¡û
>C151001126
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
660883
660955
+
Glu
TTC
[Ensembl]
¡û
>C151101085
HG810405
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon [HG810405]
69609
69682
+
Glu
TTC
-
¡û
>C151102214
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
1159644
1159572
-
Glu
TTC
[Ensembl]
¡û
>W1510562610
CTEH01000002
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
527257
527185
-
Glu
TTC
[ENA]
¡û
>W1511536232
JYPC01000104
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
14108
14036
-
Glu
TTC
[ENA]
¡û
>W11145949
AERW01000237
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
4822
4750
-
Glu
TTC
[ENA]
¡û
>W11185732
CACK01000097
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
9322
9394
+
Glu
TTC
[ENA]
¡û
>C131019573
HE660029
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
433535
433608
+
Glu
TTC
[Ensembl]
¡û
>C131009114
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
645342
645414
+
Glu
TTC
[Ensembl]
¡û
>C131009154
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
1187290
1187218
-
Glu
TTC
[Ensembl]
¡û
>W1610673720
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
91651
91579
-
Glu
TTC
[ENA]
¡û
>W1610896104
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
12165
12237
+
Glu
TTC
[ENA]
¡û
>W1610922990
LSYX01000101
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
9489
9417
-
Glu
TTC
[ENA]
¡û
>W1611021097
LYUV01000061
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1611021130
LYUW01000060
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1611021165
LYUX01000064
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
7112
7184
+
Glu
TTC
[ENA]
¡û
>W1611021199
LYUY01000068
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
7112
7184
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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