Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.345529 (127 seq.)
	>W1710816293	LKKY02000004	Bacillota	Clostridium sporogenes [LKKY]	545707	545632	-	Lys	CTT	[ENA]	○
	>W1710827051	LLES02000012	Bacillota	Clostridium sporogenes [LLES]	101916	101841	-	Lys	CTT	[ENA]	○
	>W1710856937	LLZT01000025	Bacillota	Clostridium sporogenes [LLZT]	644	719	+	Lys	CTT	[ENA]	○
	>W1710856945	LLZT01000025	Bacillota	Clostridium sporogenes [LLZT]	1378	1453	+	Lys	CTT	[ENA]	○
	>W1710857153	LLZW02000018	Bacillota	Clostridium sporogenes [LLZW]	63481	63406	-	Lys	CTT	[ENA]	○
	>W1711116138	LUAU01000014	Bacillota	Clostridium sporogenes [LUAU]	302759	302834	+	Lys	CTT	[ENA]	○
	>W1711664618	MRAC01000015	Bacillota	Clostridium sporogenes [MRAC]	224	299	+	Lys	CTT	[ENA]	○
	>W1711664646	MRAC01000037	Bacillota	Clostridium sporogenes [MRAC]	224	299	+	Lys	CTT	[ENA]	○
	>W1711664657	MRAC01000038	Bacillota	Clostridium sporogenes [MRAC]	76	1	-	Lys	CTT	[ENA]	○
	>W1711791241	MWIV01000046	Bacillota	Clostridium botulinum [MWIV]	217	142	-	Lys	CTT	[ENA]	○
	>W1711791427	MWIY01000016	Bacillota	Clostridium botulinum [MWIY]	133	208	+	Lys	CTT	[ENA]	○
	>W1711791539	MWIZ01000022	Bacillota	Clostridium botulinum [MWIZ]	217	142	-	Lys	CTT	[ENA]	○
	>W1711791619	MWJA01000036	Bacillota	Clostridium botulinum [MWJA]	217	142	-	Lys	CTT	[ENA]	○
	>W1711791925	MWJF01000076	Bacillota	Clostridium botulinum [MWJF]	247	322	+	Lys	CTT	[ENA]	○
	>W1711792142	MWJJ01000004	Bacillota	Clostridium sporogenes [MWJJ]	312278	312353	+	Lys	CTT	[ENA]	○
	>C171021830	CP013243	Bacillota	Clostridium sporogenes CDC_1632 [CP013243]	2822178	2822253	+	Lys	CTT	-	○
	>C171021935	CP013246	Bacillota	Clostridium botulinum CDC_69094 [CP013246]	1906910	1906835	-	Lys	CTT	-	○
	>C171030258	CP014148	Bacillota	Clostridium botulinum CDC_67190 [CP014148]	3613761	3613686	-	Lys	CTT	-	○
	>C005183	AM412317	Bacillota	Clostridium botulinum A str. ATCC 3502 [AM412317]	3463644	3463569	-	Lys	CTT	[Ensembl]	○
	>WENV180129006	OATB01012176	[OATB] human gut metagenome; faeces		495	420	-	Lys	CTT	[ENA]	◯
	>WENV180440905	OBWV01005536	[OBWV] human gut metagenome; faeces		302	227	-	Lys	CTT	[ENA]	◯
	>WENV180477669	OBYZ01004972	[OBYZ] human gut metagenome; faeces		61	136	+	Lys	CTT	[ENA]	◯
	>WENV180477823	OBYZ01017690	[OBYZ] human gut metagenome; faeces		136	61	-	Lys	CTT	[ENA]	◯
	>WENV180490549	OBZU01003117	[OBZU] human gut metagenome; faeces		890	815	-	Lys	CTT	[ENA]	◯
	>WENV180498980	OCAG01011783	[OCAG] human gut metagenome; faeces		364	439	+	Lys	CTT	[ENA]	◯
	>W141091582	AUZB01000010	Bacillota	Clostridium botulinum A2B3 87 [AUZB]	195188	195113	-	Lys	CTT	[ENA]	○
	>WENV181329356	OFLW01004691	[OFLW] metagenome; faeces		580	505	-	Lys	CTT	[ENA]	◯
	>WENV181463811	OGEO01048236	[OGEO] metagenome; Human gut stool		116	191	+	Lys	CTT	[ENA]	◯
	>W08001078	ABDO02000002	Bacillota	Clostridium botulinum NCTC 2916 [ABDO]	316267	316342	+	Lys	CTT	[ENA]	○
	>WENV181741136	OGQJ01072394	[OGQJ] human gut metagenome; faeces		559	484	-	Lys	CTT	[ENA]	◯
	>WENV181764298	OGQX01064164	[OGQX] human gut metagenome; faeces		4	79	+	Lys	CTT	[ENA]	◯
	>WENV181801643	OGSB01004561	[OGSB] human gut metagenome; fecal sample 5 from infant 3		890	815	-	Lys	CTT	[ENA]	◯
	>WENV181802151	OGSC01006358	[OGSC] human gut metagenome; fecal sample 8 from infant 5		790	715	-	Lys	CTT	[ENA]	◯
	>WENV181826712	OGUL01046823	[OGUL] human gut metagenome; faeces		140	215	+	Lys	CTT	[ENA]	◯
	>W141212647	AZQW01000540	Bacillota	Clostridium botulinum CDC54075 [AZQW]	302	227	-	Lys	CTT	[ENA]	○
	>C08002727	CP000727	Bacillota	Clostridium botulinum A str. Hall [CP000727]	3336740	3336668	-	Lys	CTT	[Ensembl]	○
	>C08002971	CP000939	Bacillota	Clostridium botulinum B1 str. Okra [CP000939]	3524565	3524493	-	Lys	CTT	[Ensembl]	○
	>C08002889	CP000962	Bacillota	Clostridium botulinum A3 str. Loch Maree [CP000962]	3541044	3540972	-	Lys	CTT	[Ensembl]	○
	>WENV182946350	OKVK01021173	[OKVK] human gut metagenome; human gut		776	701	-	Lys	CTT	[ENA]	◯
	>WENV183082110	OLJA01061350	[OLJA] human gut metagenome; human gut		206	131	-	Lys	CTT	[ENA]	◯
	>WENV183401457	OLZT01024383	[OLZT] human gut metagenome; feces		782	707	-	Lys	CTT	[ENA]	◯
	>W141460774	JFGD01001018	Bacillota	Clostridium botulinum [JFGD]	189	264	+	Lys	CTT	[ENA]	○
	>W141460927	JFGF01000394	Bacillota	Clostridium botulinum [JFGF]	656	731	+	Lys	CTT	[ENA]	○
	>W141461028	JFGH01000028	Bacillota	Clostridium botulinum [JFGH]	312	237	-	Lys	CTT	[ENA]	○
	>W141461328	JFGL01000852	Bacillota	Clostridium botulinum [JFGL]	659	584	-	Lys	CTT	[ENA]	○
	>W141461484	JFGN01000390	Bacillota	Clostridium botulinum [JFGN]	693	618	-	Lys	CTT	[ENA]	○
	>C181013646	CP013843	Bacillota	Clostridium botulinum B742 [CP013843]	3517510	3517435	-	Lys	CTT	-	○
	>C181013808	CP013847	Bacillota	Clostridium botulinum Af650 [CP013847]	3667200	3667125	-	Lys	CTT	-	○
	>C181013889	CP013849	Bacillota	Clostridium botulinum Mauritius [CP013849]	3476305	3476230	-	Lys	CTT	-	○
	>C181016373	CP014174	Bacillota	Clostridium botulinum B609 [CP014174]	3601287	3601212	-	Lys	CTT	-	○
	>C181016454	CP014219	Bacillota	Clostridium botulinum B515 [CP014219]	3532323	3532248	-	Lys	CTT	-	○
	>C181047856	CP020953	Bacillota	Clostridium drakei SL1 [CP020953]	4906276	4906201	-	Lys	CTT	-	○
	>C181159470	CP027775	Bacillota	Clostridium botulinum MFBjulcb1 [CP027775]	3332782	3332707	-	Lys	CTT	-	○
	>C181159549	CP027777	Bacillota	Clostridium botulinum Mfbjulcb8 [CP027777]	1504935	1505010	+	Lys	CTT	-	○
	>C181159605	CP027778	Bacillota	Clostridium botulinum Mfbjulcb6 [CP027778]	1395852	1395927	+	Lys	CTT	-	○
	>C181159667	CP027779	Bacillota	Clostridium botulinum RF5 [CP027779]	1232912	1232987	+	Lys	CTT	-	○
	>C181159759	CP027780	Bacillota	Clostridium botulinum Mfbjulcb3 [CP027780]	3614557	3614482	-	Lys	CTT	-	○
	>C181159791	CP027781	Bacillota	Clostridium botulinum MAP 5 [CP027781]	1183909	1183984	+	Lys	CTT	-	○
	>C181168983	CP028859	Bacillota	Clostridium botulinum CFSAN064329 [CP028859]	3479416	3479341	-	Lys	CTT	-	○
	>C181195368	CP031098	Bacillota	Clostridium botulinum CFSAN034202 [CP031098]	3283940	3284015	+	Lys	CTT	-	○
	>C191010351	CP013296	Bacillota	Clostridium botulinum CDC_54064 [CP013296]	817041	816966	-	Lys	CTT	-	○
	>C191010500	CP013681	Bacillota	Clostridium botulinum 1169 [CP013681]	3110387	3110312	-	Lys	CTT	-	○
	>C191010562	CP013683	Bacillota	Clostridium botulinum AM282 [CP013683]	3628868	3628793	-	Lys	CTT	-	○
	>C191010721	CP013705	Bacillota	Clostridium botulinum F160 [CP013705]	603031	603106	+	Lys	CTT	-	○
	>C191010826	CP013707	Bacillota	Clostridium botulinum F634 [CP013707]	3404758	3404683	-	Lys	CTT	-	○
	>W141565631	JIBU02000113	Bacillota	Clostridium drakei [JIBU]	795	720	-	Lys	CTT	[ENA]	○
	>W09106715	ABDR01000012	Bacillota	Clostridium botulinum str. Iwanei E [ABDR]	126892	126817	-	Lys	CTT	[ENA]	○
	>W09106759	ABDS01000001	Bacillota	Clostridium botulinum G [ABDS]	253594	253669	+	Lys	CTT	[ENA]	○
	>W141734396	JNLN01000001	Bacillota	Clostridium algidicarnis [JNLN]	341820	341745	-	Lys	CTT	[ENA]	○
	>W141734400	JNLN01000001	Bacillota	Clostridium algidicarnis [JNLN]	341446	341371	-	Lys	CTT	[ENA]	○
	>W1910498596	FXWX01000028	Bacillota	Haloimpatiens massiliensis Mt13 [FXWX]	1558459	1558534	+	Lys	CTT	[ENA]	○
	>W1910498604	FXWX01000028	Bacillota	Haloimpatiens massiliensis Mt13 [FXWX]	1559124	1559199	+	Lys	CTT	[ENA]	○
	>W1910635826	LNSX01000002	Bacillota	Clostridium botulinum CDC_67086 [LNSX]	246822	246897	+	Lys	CTT	[ENA]	○
	>C09102946	CP001083	Bacillota	Clostridium botulinum Ba4 str. 657 [CP001083]	3534828	3534753	-	Lys	CTT	[Ensembl]	○
	>W1911577067	PDLH01000005	Bacillota	Clostridium sporogenes FDAARGOS_423 [PDLH]	15805	15730	-	Lys	CTT	[ENA]	○
	>W1911577075	PDLH01000005	Bacillota	Clostridium sporogenes FDAARGOS_423 [PDLH]	15070	14995	-	Lys	CTT	[ENA]	○
	>W1810076405	PEIK01000025	Bacillota	Clostridium combesii DSM 20696 [PEIK]	10275	10350	+	Lys	CTT	[ENA]	○
	>C151003173	AP014696	Bacillota	Clostridium botulinum 111 [AP014696]	3485649	3485574	-	Lys	CTT	-	○
	>C10102725	CP002011	Bacillota	Clostridium botulinum F str. 230613 [CP002011]	3555777	3555702	-	Lys	CTT	[Ensembl]	○
	>C11104851	FR773526	Bacillota	Clostridium botulinum H04402 065 [FR773526]	3477676	3477601	-	Lys	CTT	[Ensembl]	○
	>C11104859	FR773526	Bacillota	Clostridium botulinum H04402 065 [FR773526]	3476941	3476866	-	Lys	CTT	[Ensembl]	○
	>W1511511236	JXSU01000008	Bacillota	Clostridium botulinum B2 450 [JXSU]	225298	225223	-	Lys	CTT	[ENA]	○
	>W1511544427	JZJO01000256	Bacillota	Clostridium sporogenes 85-3852 [JZJO]	565	640	+	Lys	CTT	[ENA]	○
	>W1511566153	LAGK01000490	Bacillota	Clostridium botulinum CDC68016 [LAGK]	178	103	-	Lys	CTT	[ENA]	○
	>W1511566253	LAGM01000355	Bacillota	Clostridium botulinum Prevot1662 [LAGM]	647	722	+	Lys	CTT	[ENA]	○
	>W121007488	AGAH01000118	Bacillota	Clostridium sporogenes PA 3679 [AGAH]	88	163	+	Lys	CTT	[ENA]	○
	>W1610026113	AUYV01000009	Bacillota	Clostridium botulinum B2 331 [AUYV]	149653	149578	-	Lys	CTT	[ENA]	○
	>W1610026173	AUYW01000010	Bacillota	Clostridium botulinum A2 117 [AUYW]	150015	149940	-	Lys	CTT	[ENA]	○
	>W1610026452	AUZA01000012	Bacillota	Clostridium botulinum A2B7 92 [AUZA]	63963	63888	-	Lys	CTT	[ENA]	○
	>W1610601315	LFOL01000075	Bacillota	Clostridium botulinum [LFOL]	165	240	+	Lys	CTT	[ENA]	○
	>W1610601392	LFON01000004	Bacillota	Clostridium botulinum [LFON]	167	92	-	Lys	CTT	[ENA]	○
	>W1610601521	LFOP01000098	Bacillota	Clostridium botulinum [LFOP]	83	158	+	Lys	CTT	[ENA]	○
	>W1610601576	LFOQ01000083	Bacillota	Clostridium botulinum [LFOQ]	83	158	+	Lys	CTT	[ENA]	○
	>W1610601971	LFOX01000063	Bacillota	Clostridium botulinum [LFOX]	646	721	+	Lys	CTT	[ENA]	○
	>W1610601996	LFOY01000004	Bacillota	Clostridium botulinum [LFOY]	145	70	-	Lys	CTT	[ENA]	○
	>W1610602077	LFOZ01000090	Bacillota	Clostridium botulinum [LFOZ]	488	563	+	Lys	CTT	[ENA]	○
	>W1610602485	LFPH01000006	Bacillota	Clostridium sporogenes botulinum [LFPH]	167	92	-	Lys	CTT	[ENA]	○
	>W1610602775	LFPM01000014	Bacillota	Clostridium sporogenes [LFPM]	2	77	+	Lys	CTT	[ENA]	○
	>W1610602817	LFPM01000039	Bacillota	Clostridium sporogenes [LFPM]	647	722	+	Lys	CTT	[ENA]	○
	>W1610603051	LFPQ01000015	Bacillota	Clostridium botulinum [LFPQ]	167	92	-	Lys	CTT	[ENA]	○
	>W1610603545	LFPX01000046	Bacillota	Clostridium botulinum [LFPX]	165	240	+	Lys	CTT	[ENA]	○
	>W1610604093	LFQG01000024	Bacillota	Clostridium botulinum [LFQG]	167	92	-	Lys	CTT	[ENA]	○
	>W1610609086	LFVV01000027	Bacillota	Clostridium sporogenes [LFVV]	57722	57647	-	Lys	CTT	[ENA]	○
	>W1610680340	LKKY01000052	Bacillota	Clostridium sporogenes [LKKY]	57722	57647	-	Lys	CTT	[ENA]	○
	>W1610690288	LLES01000005	Bacillota	Clostridium sporogenes [LLES]	101916	101841	-	Lys	CTT	[ENA]	○
	>W1610719318	LLZT01000025	Bacillota	Clostridium sporogenes [LLZT]	644	719	+	Lys	CTT	[ENA]	○
	>W1610719326	LLZT01000025	Bacillota	Clostridium sporogenes [LLZT]	1378	1453	+	Lys	CTT	[ENA]	○
	>W1610719541	LLZW01000020	Bacillota	Clostridium sporogenes [LLZW]	63481	63406	-	Lys	CTT	[ENA]	○
	>W1610927429	LUAU01000014	Bacillota	Clostridium sporogenes [LUAU]	302759	302834	+	Lys	CTT	[ENA]	○
	>W1710022162	AUYV01000009	Bacillota	Clostridium botulinum B2 331 [AUYV]	149653	149578	-	Lys	CTT	[ENA]	○
	>W1710022222	AUYW01000010	Bacillota	Clostridium botulinum A2 117 [AUYW]	150015	149940	-	Lys	CTT	[ENA]	○
	>W1710022501	AUZA01000012	Bacillota	Clostridium botulinum A2B7 92 [AUZA]	63963	63888	-	Lys	CTT	[ENA]	○
	>W1710722831	LFOL01000075	Bacillota	Clostridium botulinum [LFOL]	165	240	+	Lys	CTT	[ENA]	○
	>W1710722908	LFON01000004	Bacillota	Clostridium botulinum [LFON]	167	92	-	Lys	CTT	[ENA]	○
	>W1710723037	LFOP01000098	Bacillota	Clostridium botulinum [LFOP]	83	158	+	Lys	CTT	[ENA]	○
	>W1710723092	LFOQ01000083	Bacillota	Clostridium botulinum [LFOQ]	83	158	+	Lys	CTT	[ENA]	○
	>W1710723487	LFOX01000063	Bacillota	Clostridium botulinum [LFOX]	646	721	+	Lys	CTT	[ENA]	○
	>W1710723512	LFOY01000004	Bacillota	Clostridium botulinum [LFOY]	145	70	-	Lys	CTT	[ENA]	○
	>W1710723593	LFOZ01000090	Bacillota	Clostridium botulinum [LFOZ]	488	563	+	Lys	CTT	[ENA]	○
	>W1710724001	LFPH01000006	Bacillota	Clostridium sporogenes botulinum [LFPH]	167	92	-	Lys	CTT	[ENA]	○
	>W1710724291	LFPM01000014	Bacillota	Clostridium sporogenes [LFPM]	2	77	+	Lys	CTT	[ENA]	○
	>W1710724333	LFPM01000039	Bacillota	Clostridium sporogenes [LFPM]	647	722	+	Lys	CTT	[ENA]	○
	>W1710724567	LFPQ01000015	Bacillota	Clostridium botulinum [LFPQ]	167	92	-	Lys	CTT	[ENA]	○
	>W1710725061	LFPX01000046	Bacillota	Clostridium botulinum [LFPX]	165	240	+	Lys	CTT	[ENA]	○
	>W1710725609	LFQG01000024	Bacillota	Clostridium botulinum [LFQG]	167	92	-	Lys	CTT	[ENA]	○
	>W1710730373	LFVV01000027	Bacillota	Clostridium sporogenes [LFVV]	57722	57647	-	Lys	CTT	[ENA]	○
	>W1710762214	LIIV01000005	Bacillota	Clostridium botulinum [LIIV]	233188	233263	+	Lys	CTT	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK