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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.351784 (4 seq.)
>W1810155008
PIZU01000064
Actinomycetota
Mycobacterium sp. QGD 101 [PIZU]
4442
4514
+
Arg
ACG
[ENA]
¡û
>W1610617517
LGTW01000011
Actinomycetota
Mycolicibacterium wolinskyi [LGTW]
176245
176317
+
Arg
ACG
[ENA]
¡û
>W1710619849
JMHR01000147
Actinomycetota
Mycobacterium sp. SWH-M3 [JMHR]
20630
20702
+
Arg
ACG
[ENA]
¡û
>W1710743104
LGTW01000011
Actinomycetota
Mycolicibacterium wolinskyi [LGTW]
176245
176317
+
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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