tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.353123 (126 seq.)
>W1711124663 LUKI01000118 Gammaproteobacteria Gammaproteobacteria bacterium F7 (LUKI) 367 442 + Trp CCA [ENA] ¡û
>W1711174840 LWEK01000014 Gammaproteobacteria Oleiphilus sp. HI0009 (LWEK) 353 428 + Trp CCA [ENA] ¡û
>W1711174899 LWEK01001685 Gammaproteobacteria Oleiphilus sp. HI0009 (LWEK) 367 292 - Trp CCA [ENA] ¡û
>W1711175730 LWEY01001134 Gammaproteobacteria Oleiphilus sp. HI0043 (LWEY) 329 404 + Trp CCA [ENA] ¡û
>W1711176219 LWFG01000036 Gammaproteobacteria Oleiphilus sp. HI0065 (LWFG) 389 464 + Trp CCA [ENA] ¡û
>W1711176223 LWFG01000263 Gammaproteobacteria Oleiphilus sp. HI0065 (LWFG) 338 413 + Trp CCA [ENA] ¡û
>W1711176669 LWFN01000616 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 87 162 + Trp CCA [ENA] ¡û
>W1711176693 LWFN01001735 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 132 57 - Trp CCA [ENA] ¡û
>W1711176707 LWFN01001997 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 15646 15571 - Trp CCA [ENA] ¡û
>W1711177101 LWFV01000222 Gammaproteobacteria Oleiphilus sp. HI0081 (LWFV) 2104 2029 - Trp CCA [ENA] ¡û
>W1711177806 LWGG01000919 Gammaproteobacteria Oleiphilus sp. HI0128 (LWGG) 324 399 + Trp CCA [ENA] ¡û
>W1711631536 MPRJ01000059 Gammaproteobacteria Solemya elarraichensis gill symbiont (MPRJ) 15652 15577 - Trp CCA [ENA] ¡û
>C171094609 CP019450 Gammaproteobacteria Halioglobus japonicus NBRC 107739 (CP019450) 4029698 4029623 - Trp CCA - ¡û
>C171100938 CP019915 Gammaproteobacteria Halomonas sp. 'Soap Lake #7' (CP019915) 4387377 4387452 + Trp CCA - ¡û
>C171118691 CP021425 Gammaproteobacteria Oleiphilus messinensis ME102 (CP021425) 729532 729607 + Trp CCA - ¡û
>W131095880 AOPO01000014 Gammaproteobacteria Halomonas titanicae BH1 [AOPO] 86404 86329 - Trp CCA [ENA] ¡û
>W131176892 ARKK01000024 Gammaproteobacteria Halomonas lutea DSM 23508 [ARKK] 60836 60761 - Trp CCA [ENA] ¡û
>C005210 AE016828 Gammaproteobacteria Coxiella burnetii RSA 493 207635 207710 + Trp CCA [Ensembl] ¡û
>w020082 AAUP01000016 Gammaproteobacteria Coxiella burnetii 'MSU Goat Q177' [AAUP] 1392 1315 - Trp CCA [ENA] ¡û
>WENV180090485 MPMF02141982 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 181 256 + Trp CCA [ENA] ¢þ
>WENV180386697 OBPC01062014 [OBPC] marine metagenome; Sterile flask 259 184 - Trp CCA [ENA] ¢þ
>WENV180389317 OBPJ01001942 [OBPJ] marine metagenome; seawater 1454 1529 + Trp CCA [ENA] ¢þ
>WENV180396691 OBPV01060734 [OBPV] marine metagenome; ENVO:00002010 13 88 + Trp CCA [ENA] ¢þ
>WENV181169709 OEIV010008017 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 1017 1092 + Trp CCA [ENA] ¢þ
>WENV181233682 OFET01000039 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 93098 93173 + Trp CCA [ENA] ¢þ
>WENV181234002 OFET01000708 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 105 180 + Trp CCA [ENA] ¢þ
>WENV181309521 OFIW01003189 [OFIW] marine metagenome; seawater 109 34 - Trp CCA [ENA] ¢þ
>WENV181324901 OFLH01036807 [OFLH] marine metagenome; sea ice 299 374 + Trp CCA [ENA] ¢þ
>WENV181415807 OGCL01026879 [OGCL] hot springs metagenome; Hot spring water 1436 1361 - Trp CCA [ENA] ¢þ
>W141152566 AXBW01000064 Gammaproteobacteria Marinobacter sp. C1S70 [AXBW] 15444 15369 - Trp CCA [ENA] ¡û
>W141152839 AXCC01000038 Gammaproteobacteria Marinobacter sp. EN3 [AXCC] 66 141 + Trp CCA [ENA] ¡û
>WENV182570010 OJFB01004027 [OJFB] seawater metagenome; Sea water 1343 1418 + Trp CCA [ENA] ¢þ
>WENV182575539 OJFV01000042 [OJFV] seawater metagenome; Sea water 106102 106027 - Trp CCA [ENA] ¢þ
>WENV182578993 OJGR01000832 [OJGR] seawater metagenome; Sea water 480 555 + Trp CCA [ENA] ¢þ
>WENV182583866 OJHF01000203 [OJHF] seawater metagenome; Sea water 1334 1409 + Trp CCA [ENA] ¢þ
>WENV182588585 OJHV01000129 [OJHV] seawater metagenome; Sea water 4252 4177 - Trp CCA [ENA] ¢þ
>WENV182591359 OJIM01002514 [OJIM] seawater metagenome; Sea water 460 535 + Trp CCA [ENA] ¢þ
>WENV182593121 OJIT01000023 [OJIT] seawater metagenome; Sea water 628 703 + Trp CCA [ENA] ¢þ
>WENV182593160 OJIT01001331 [OJIT] seawater metagenome; Sea water 1651 1576 - Trp CCA [ENA] ¢þ
>WENV182593174 OJIT01002022 [OJIT] seawater metagenome; Sea water 1292 1367 + Trp CCA [ENA] ¢þ
>W141260775 CCAK010000036 Gammaproteobacteria Coxiella burnetii [CCAK] 7498 7573 + Trp CCA [ENA] ¡û
>WENV183058146 OLHN01008267 [OLHN] seawater metagenome; Sea water 1107 1032 - Trp CCA [ENA] ¢þ
>WENV170141293 CENX01175338 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 269 344 + Trp CCA [ENA] ¢þ
>WENV170141308 CENX01176241 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 268 343 + Trp CCA [ENA] ¢þ
>WENV170188631 CEPB01063428 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2011 2086 + Trp CCA [ENA] ¢þ
>WENV170255919 CEQX01035063 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 189 114 - Trp CCA [ENA] ¢þ
>WENV170256479 CEQX01093317 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 710 635 - Trp CCA [ENA] ¢þ
>WENV170273029 CERL01041732 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9297 9222 - Trp CCA [ENA] ¢þ
>WENV170340487 CETC01001787 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5170 5245 + Trp CCA [ENA] ¢þ
>WENV170356980 CETJ01087013 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 339 414 + Trp CCA [ENA] ¢þ
>WENV170454369 CEVA01035326 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 114 189 + Trp CCA [ENA] ¢þ
>WENV170475671 CEVI01022585 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 684 759 + Trp CCA [ENA] ¢þ
>WENV170476518 CEVI01118647 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1621 1546 - Trp CCA [ENA] ¢þ
>WENV170514569 CEWA01095740 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 545 620 + Trp CCA [ENA] ¢þ
>WENV170666145 JYMV01033769 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 9741 9816 + Trp CCA [ENA] ¢þ
>WENV170675582 LDZP01000077 [LDZP] terrestrial metagenome; oil reservoir sample I1 55858 55783 - Trp CCA [ENA] ¢þ
>WENV170695473 LGVE01100836 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 270 195 - Trp CCA [ENA] ¢þ
>WENV170753424 LUMK01000177 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 7812 7737 - Trp CCA [ENA] ¢þ
>WENV170762313 LUMW01004760 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 1963 1888 - Trp CCA [ENA] ¢þ
>WENV170772338 LXNI01024706 [LXNI] sponge metagenome; marine sponge reef 1173 1098 - Trp CCA [ENA] ¢þ
>WENV170907200 MDTE01048861 [MDTE] marine metagenome; seawater 294199 294124 - Trp CCA [ENA] ¢þ
>WENV170908935 MDTE01071130 [MDTE] marine metagenome; seawater 1573 1648 + Trp CCA [ENA] ¢þ
>WENV170909024 MDTE01072625 [MDTE] marine metagenome; seawater 7085 7010 - Trp CCA [ENA] ¢þ
>WENV170909546 MDTE01079588 [MDTE] marine metagenome; seawater 10011 10086 + Trp CCA [ENA] ¢þ
>WENV170910379 MDTE01091133 [MDTE] marine metagenome; seawater 160 235 + Trp CCA [ENA] ¢þ
>WENV170914066 MDTE01142773 [MDTE] marine metagenome; seawater 1459 1534 + Trp CCA [ENA] ¢þ
>C181044752 CP020469 Gammaproteobacteria Halomonas sp. 'Soap Lake #6' (CP020469) 4387377 4387452 + Trp CCA - ¡û
>C191091568 CP032542 Gammaproteobacteria Coxiella burnetii 2014-PE-15890 (CP032542) 49682 49607 - Trp CCA - ¡û
>C191123865 CP034367 Gammaproteobacteria Halomonas venusta MA-ZP17-13 (CP034367) 183218 183293 + Trp CCA - ¡û
>W141703075 JMLY01000001 Gammaproteobacteria Marinobacter sp. HL-58 [JMLY] 1333156 1333231 + Trp CCA [ENA] ¡û
>W141754495 JNVT01000030 Gammaproteobacteria Gammaproteobacteria bacterium MFB021 [JNVT] 4517 4592 + Trp CCA [ENA] ¡û
>W141815620 JQJA01000026 Gammaproteobacteria Cobetia marina [JQJA] 50696 50621 - Trp CCA [ENA] ¡û
>WENV025784 AACY020913869 Marine microbial communities from Global Ocean Sampling (GOS) 239 316 + Trp CCA [ENA]
>W1911119107 NOLP01000035 Gammaproteobacteria Coxiella burnetii Ko Q229 (NOLP) 137621 137546 - Trp CCA [ENA] ¡û
>W1911119325 NOLV01000002 Gammaproteobacteria Coxiella burnetii California 33 RSA329 (NOLV) 169776 169851 + Trp CCA [ENA] ¡û
>W1911136624 NOVF01000002 Gammaproteobacteria Coxiella burnetii California 16 RSA350 clone 2 (NOVF) 169776 169851 + Trp CCA [ENA] ¡û
>W1911245397 NSKA01000006 Gammaproteobacteria Halomonas sp. WN018 (NSKA) 100212 100287 + Trp CCA [ENA] ¡û
>W1911424839 NXGV01000007 Gammaproteobacteria Marinobacter sp. ANT_B65 (NXGV) 697 772 + Trp CCA [ENA] ¡û
>W1911495821 OBQJ01000011 Gammaproteobacteria Chromohalobacter canadensis USBA 855 (OBQJ) 89482 89407 - Trp CCA [ENA] ¡û
>W1810200023 PNRF01000028 Gammaproteobacteria Halomonas sp. MC28 (PNRF) 5236 5311 + Trp CCA [ENA] ¡û
>W1810295775 PTIT01000009 Gammaproteobacteria Marinobacter persicus UTICA-S1B6 (PTIT) 118007 117932 - Trp CCA [ENA] ¡û
>W1810295859 PTIV01000007 Gammaproteobacteria Marinobacter persicus UTICA-S1B3 (PTIV) 118119 118044 - Trp CCA [ENA] ¡û
>W1810363626 PVRV01000013 Gammaproteobacteria Halomonadaceae bacterium R4HLG17 (PVRV) 12039 12114 + Trp CCA [ENA] ¡û
>W1810426115 PYVX01000006 Gammaproteobacteria Halomonas denitrificans DSM 18045 (PYVX) 177939 177864 - Trp CCA [ENA] ¡û
>W1810463480 PZZO01000008 Gammaproteobacteria Marinobacter sp. PT19DW (PZZO) 182670 182595 - Trp CCA [ENA] ¡û
>WENV027773 AACY021071363 Marine microbial communities from Global Ocean Sampling (GOS) 239 316 + Trp CCA [ENA]
>W1810700736 QMDL01000005 Gammaproteobacteria Marinobacter litoralis Sw-45 (QMDL) 8693 8768 + Trp CCA [ENA] ¡û
>W1810720938 QNRO01000037 Gammaproteobacteria Marinobacter pelagius 114J (QNRO) 15423 15348 - Trp CCA [ENA] ¡û
>C151102364 LK937696 Gammaproteobacteria Coxiella burnetii Z3055 207671 207746 + Trp CCA - ¡û
>WENV032753 AACY021472623 Marine microbial communities from Global Ocean Sampling (GOS) 506 583 + Trp CCA [ENA]
>WENV033719 AACY021549843 Marine microbial communities from Global Ocean Sampling (GOS) 92 169 + Trp CCA [ENA]
>WENV034422 AACY021607931 Marine microbial communities from Global Ocean Sampling (GOS) 729 652 - Trp CCA [ENA]
>WENV036047 AACY021745598 Marine microbial communities from Global Ocean Sampling (GOS) 138 61 - Trp CCA [ENA]
>C11113760 CP001978 Gammaproteobacteria Marinobacter adhaerens HP15 369350 369425 + Trp CCA [Ensembl] ¡û
>WENV043726 AACY022352921 Marine microbial communities from Global Ocean Sampling (GOS) 390 467 + Trp CCA [ENA]
>W11137014 AEGL01000191 Gammaproteobacteria gamma proteobacterium IMCC2047 [AEGL] 83 158 + Trp CCA [ENA] ¡û
>WENV004906 AACY020137532 Marine microbial communities from Global Ocean Sampling (GOS) 1674 1751 + Trp CCA [ENA]
>WENV051017 AACY022923372 Marine microbial communities from Global Ocean Sampling (GOS) 325 402 + Trp CCA [ENA]
>WENV052184 AACY023010580 Marine microbial communities from Global Ocean Sampling (GOS) 429 352 - Trp CCA [ENA]
>WENV055605 AACY023232878 Marine microbial communities from Global Ocean Sampling (GOS) 1190 1265 + Trp CCA [ENA]
>C161109459 LT593974 Gammaproteobacteria Halomonas sp. HL-93 3812124 3812049 - Trp CCA - ¡û
>W121016442 AGQZ01000023 Gammaproteobacteria Halomonas boliviensis LC1 [AGQZ] 82220 82145 - Trp CCA [ENA] ¡û
>WENV060803 AACY023410853 Marine microbial communities from Global Ocean Sampling (GOS) 139 62 - Trp CCA [ENA]
>WENV067525 AACY023693415 Marine microbial communities from Global Ocean Sampling (GOS) 1438 1363 - Trp CCA [ENA]
>WENV068029 AACY023711441 Marine microbial communities from Global Ocean Sampling (GOS) 837 914 + Trp CCA [ENA]
>W1610041622 BAWY01000005 Gammaproteobacteria Halomonas sp. JCM 19032 (BAWY) 53652 53577 - Trp CCA [ENA] ¡û
>W1610629411 LIHP01000020 Gammaproteobacteria Marinobacter sp. HL-58 (LIHP) 15321 15246 - Trp CCA [ENA] ¡û
>W1610935635 LUKI01000118 Gammaproteobacteria Gammaproteobacteria bacterium F7 (LUKI) 367 442 + Trp CCA [ENA] ¡û
>W1610983153 LWEK01000014 Gammaproteobacteria Oleiphilus sp. HI0009 (LWEK) 353 428 + Trp CCA [ENA] ¡û
>W1610983212 LWEK01001685 Gammaproteobacteria Oleiphilus sp. HI0009 (LWEK) 367 292 - Trp CCA [ENA] ¡û
>W1610984043 LWEY01001134 Gammaproteobacteria Oleiphilus sp. HI0043 (LWEY) 329 404 + Trp CCA [ENA] ¡û
>W1610984532 LWFG01000036 Gammaproteobacteria Oleiphilus sp. HI0065 (LWFG) 389 464 + Trp CCA [ENA] ¡û
>W1610984536 LWFG01000263 Gammaproteobacteria Oleiphilus sp. HI0065 (LWFG) 338 413 + Trp CCA [ENA] ¡û
>W1610984982 LWFN01000616 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 87 162 + Trp CCA [ENA] ¡û
>W1610985006 LWFN01001735 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 132 57 - Trp CCA [ENA] ¡û
>W1610985020 LWFN01001997 Gammaproteobacteria Oleiphilus sp. HI0073 (LWFN) 15646 15571 - Trp CCA [ENA] ¡û
>W1610985414 LWFV01000222 Gammaproteobacteria Oleiphilus sp. HI0081 (LWFV) 2104 2029 - Trp CCA [ENA] ¡û
>W1610986119 LWGG01000919 Gammaproteobacteria Oleiphilus sp. HI0128 (LWGG) 324 399 + Trp CCA [ENA] ¡û
>W1710038716 BAWY01000005 Gammaproteobacteria Halomonas sp. JCM 19032 (BAWY) 53652 53577 - Trp CCA [ENA] ¡û
>W1710519440 FNES01000017 Gammaproteobacteria Halomonas gudaonensis (FNES) 79823 79748 - Trp CCA [ENA] ¡û
>W1710521329 FNGH01000014 Gammaproteobacteria Halomonas pantelleriensis (FNGH) 2888 2963 + Trp CCA [ENA] ¡û
>W1710524591 FNIV01000013 Gammaproteobacteria Halomonas shengliensis (FNIV) 94480 94405 - Trp CCA [ENA] ¡û
>W1710539752 FNVQ01000004 Gammaproteobacteria Marinobacterium lutimaris (FNVQ) 302453 302378 - Trp CCA [ENA] ¡û
>W1710578496 FPBP01000014 Gammaproteobacteria Halomonas korlensis (FPBP) 95837 95762 - Trp CCA [ENA] ¡û
>W1710581153 FPJW01000010 Gammaproteobacteria Marinospirillum alkaliphilum DSM 21637 (FPJW) 2797 2872 + Trp CCA [ENA] ¡û
>W1710760550 LIHP01000020 Gammaproteobacteria Marinobacter sp. HL-58 (LIHP) 15321 15246 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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