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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.35703 (4 seq.)
>W1711395680
METW01000046
Unclassified
candidate division WOR-1 bacterium RIFOXYA2_FULL_41_14 [METW]
2364
2452
+
Ser
CGA
[ENA]
¡û
>W1711395938
MEUC01000021
Unclassified
candidate division WOR-1 bacterium RIFOXYB2_FULL_42_35 [MEUC]
47810
47898
+
Ser
CGA
[ENA]
¡û
>W1711396201
MEUI01000027
Unclassified
candidate division WOR-1 bacterium RIFOXYC2_FULL_41_25 [MEUI]
47807
47895
+
Ser
CGA
[ENA]
¡û
>W1711396317
MEUL01000110
Unclassified
candidate division WOR-1 bacterium RIFOXYD2_FULL_41_8 [MEUL]
1568
1480
-
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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