This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.359121 (11 seq.)
>W1711662049
MQTZ01000042
Cyanobacteriota
Leptolyngbya sp. 'hensonii' 'hensonii' [MQTZ]
90839
90768
-
Thr
CGT
[ENA]
¡û
>W08009347
ABOY01000001
Cyanobacteriota
Gloeothece citriformis PCC 7424 [ABOY]
61948
62019
+
Thr
CGT
[ENA]
¡û
>W08011524
ABVJ01000002
Cyanobacteriota
Cyanothece sp. PCC 7425 [ABVJ]
465358
465287
-
Thr
CGT
[ENA]
¡û
>WENV181852649
OGWH01000111
[OGWH] freshwater metagenome; freshwater
71
142
+
Thr
CGT
[ENA]
¢þ
>C09103547
CP001291
Cyanobacteriota
Gloeothece citriformis PCC 7424 [CP001291]
5397187
5397258
+
Thr
CGT
[Ensembl]
¡û
>C09103585
CP001344
Cyanobacteriota
Cyanothece sp. PCC 7425 [CP001344]
5316036
5315965
-
Thr
CGT
[Ensembl]
¡û
>W1810366187
PVWD01000049
Cyanobacteriota
filamentous cyanobacterium CCP2 [PVWD]
13605
13676
+
Thr
CGT
[ENA]
¡û
>W1810366220
PVWE01000040
Cyanobacteriota
filamentous cyanobacterium CCP1 [PVWE]
7389
7460
+
Thr
CGT
[ENA]
¡û
>C11106716
CP002198
Cyanobacteriota
Gloeothece verrucosa PCC 7822 [CP002198]
1572824
1572895
+
Thr
CGT
[Ensembl]
¡û
>C11106760
CP002198
Cyanobacteriota
Gloeothece verrucosa PCC 7822 [CP002198]
1572824
1572895
+
Thr
CGT
[Ensembl]
¡û
>C131004325
CP003558
Cyanobacteriota
Synechococcus sp. PCC 6312 [CP003558]
2090979
2090908
-
Thr
CGT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK