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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.359861 (4 seq.)
>W1711392978
MEOC01000042
Bacteroidota
Bacteroidetes bacterium GWE2_42_42 [MEOC]
137310
137382
+
Met
CAT
[ENA]
¡û
>W1711393453
MEOQ01000005
Bacteroidota
Bacteroidetes bacterium GWF2_43_63 [MEOQ]
875
803
-
Met
CAT
[ENA]
¡û
>W1711583604
MNXL01000103
Chloroflexota
Anaerolineae bacterium CG2_30_64_16 [MNXL]
3913
3839
-
Met
CAT
[ENA]
¡û
>WENV183678075
ORJL011835998
[ORJL] groundwater metagenome; groundwater
523
597
+
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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