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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.368643 (230 seq.)
>W1710821639
LKTU01000026
Betaproteobacteria
Variovorax paradoxus [LKTU]
51422
51347
-
Gly
GCC
[ENA]
¡û
>W1710821642
LKTU01000029
Betaproteobacteria
Variovorax paradoxus [LKTU]
96335
96410
+
Gly
GCC
[ENA]
¡û
>W1710821777
LKTX01000013
Betaproteobacteria
Variovorax paradoxus [LKTX]
44779
44704
-
Gly
GCC
[ENA]
¡û
>W1710821779
LKTX01000014
Betaproteobacteria
Variovorax paradoxus [LKTX]
33308
33383
+
Gly
GCC
[ENA]
¡û
>W1710821835
LKTY01000043
Betaproteobacteria
Variovorax paradoxus [LKTY]
53608
53683
+
Gly
GCC
[ENA]
¡û
>W1710821854
LKTY01000079
Betaproteobacteria
Variovorax paradoxus [LKTY]
6499
6424
-
Gly
GCC
[ENA]
¡û
>W1710862477
LMEK01000012
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
418185
418260
+
Gly
GCC
[ENA]
¡û
>W1710863076
LMEV01000013
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
63541
63466
-
Gly
GCC
[ENA]
¡û
>W1710863089
LMEV01000017
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
1759465
1759390
-
Gly
GCC
[ENA]
¡û
>W1710865364
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
228788
228863
+
Gly
GCC
[ENA]
¡û
>W1710865366
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
229177
229252
+
Gly
GCC
[ENA]
¡û
>W1710866639
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
37905
37980
+
Gly
GCC
[ENA]
¡û
>W1710866641
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
38296
38371
+
Gly
GCC
[ENA]
¡û
>W1710867248
LMIC01000044
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
314587
314512
-
Gly
GCC
[ENA]
¡û
>W1710867266
LMIC01000051
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
259636
259711
+
Gly
GCC
[ENA]
¡û
>W1710867452
LMIH01000008
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
20456
20381
-
Gly
GCC
[ENA]
¡û
>W1710867454
LMIH01000008
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
10030
9955
-
Gly
GCC
[ENA]
¡û
>W1710872449
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
157913
157838
-
Gly
GCC
[ENA]
¡û
>W1710872451
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
157519
157444
-
Gly
GCC
[ENA]
¡û
>W1710872612
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
243434
243359
-
Gly
GCC
[ENA]
¡û
>W1710872614
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
243043
242968
-
Gly
GCC
[ENA]
¡û
>W1710873487
LMMV01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
363021
363096
+
Gly
GCC
[ENA]
¡û
>W1710875987
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
352968
352893
-
Gly
GCC
[ENA]
¡û
>W1710875989
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
352537
352462
-
Gly
GCC
[ENA]
¡û
>W1710877025
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
590837
590762
-
Gly
GCC
[ENA]
¡û
>W1710877027
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
590446
590371
-
Gly
GCC
[ENA]
¡û
>W1710892920
LNEG01000020
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
150
225
+
Gly
GCC
[ENA]
¡û
>W1711073158
LSIH01000093
Betaproteobacteria
Acidovorax delafieldii [LSIH]
2653
2578
-
Gly
GCC
[ENA]
¡û
>W1711073160
LSIH01000093
Betaproteobacteria
Acidovorax delafieldii [LSIH]
2265
2190
-
Gly
GCC
[ENA]
¡û
>W1711250081
LYMK01000011
Betaproteobacteria
Variovorax sp. JS1663 [LYMK]
103189
103114
-
Gly
GCC
[ENA]
¡û
>W1711250100
LYMK01000028
Betaproteobacteria
Variovorax sp. JS1663 [LYMK]
4176
4101
-
Gly
GCC
[ENA]
¡û
>W1711259826
LYVO01000047
Betaproteobacteria
Variovorax sp. KK3 [LYVO]
16220
16295
+
Gly
GCC
[ENA]
¡û
>W1711259840
LYVO01000102
Betaproteobacteria
Variovorax sp. KK3 [LYVO]
8485
8410
-
Gly
GCC
[ENA]
¡û
>W1711384828
MEDK01000190
Betaproteobacteria
Acidovorax sp. SCN 65-108 [MEDK]
4300
4375
+
Gly
GCC
[ENA]
¡û
>W1711384830
MEDK01000190
Betaproteobacteria
Acidovorax sp. SCN 65-108 [MEDK]
4668
4743
+
Gly
GCC
[ENA]
¡û
>W1711384843
MEDL01000042
Betaproteobacteria
Acidovorax sp. SCN 68-22 [MEDL]
5626
5551
-
Gly
GCC
[ENA]
¡û
>W1711384845
MEDL01000042
Betaproteobacteria
Acidovorax sp. SCN 68-22 [MEDL]
5314
5239
-
Gly
GCC
[ENA]
¡û
>W1711386479
MEFM01000011
Betaproteobacteria
Variovorax sp. SCN 67-85 [MEFM]
133366
133441
+
Gly
GCC
[ENA]
¡û
>W1711386499
MEFM01000020
Betaproteobacteria
Variovorax sp. SCN 67-85 [MEFM]
79389
79314
-
Gly
GCC
[ENA]
¡û
>W1711409740
MGPC01000029
Betaproteobacteria
Curvibacter sp. GWA2_64_110 [MGPC]
77875
77800
-
Gly
GCC
[ENA]
¡û
>W1711413653
MGWQ01000122
Betaproteobacteria
Gallionellales bacterium GWA2_59_43 [MGWQ]
121
196
+
Gly
GCC
[ENA]
¡û
>W1711413673
MGWR01000024
Betaproteobacteria
Gallionellales bacterium GWA2_60_142 [MGWR]
17463
17538
+
Gly
GCC
[ENA]
¡û
>W1711584016
MNXY01000069
Betaproteobacteria
Comamonadaceae bacterium CG2_30_60_41 [MNXY]
3365
3290
-
Gly
GCC
[ENA]
¡û
>W1711584017
MNXY01000069
Betaproteobacteria
Comamonadaceae bacterium CG2_30_60_41 [MNXY]
3269
3194
-
Gly
GCC
[ENA]
¡û
>W1711721736
MTJN01000002
Betaproteobacteria
Rhodoferax fermentans [MTJN]
422685
422610
-
Gly
GCC
[ENA]
¡û
>W1711721737
MTJN01000002
Betaproteobacteria
Rhodoferax fermentans [MTJN]
422573
422498
-
Gly
GCC
[ENA]
¡û
>C171091718
CP019240
Betaproteobacteria
Rhodoferax antarcticus DSM 24876 [CP019240]
1465759
1465834
+
Gly
GCC
-
¡û
>C171091719
CP019240
Betaproteobacteria
Rhodoferax antarcticus DSM 24876 [CP019240]
1465872
1465947
+
Gly
GCC
-
¡û
>C171118042
CP021359
Betaproteobacteria
Acidovorax carolinensis NA2 [CP021359]
1464697
1464772
+
Gly
GCC
-
¡û
>C171118044
CP021359
Betaproteobacteria
Acidovorax carolinensis NA2 [CP021359]
1465089
1465164
+
Gly
GCC
-
¡û
>C171118196
CP021366
Betaproteobacteria
Acidovorax carolinensis P4 [CP021366]
1588017
1588092
+
Gly
GCC
-
¡û
>C171118198
CP021366
Betaproteobacteria
Acidovorax carolinensis P4 [CP021366]
1588409
1588484
+
Gly
GCC
-
¡û
>W131225122
AUDI01000004
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
132814
132889
+
Gly
GCC
[ENA]
¡û
>C000144
CP000512
Betaproteobacteria
Paracidovorax citrulli AAC00-1 [CP000512]
1604636
1604561
-
Gly
GCC
[Ensembl]
¡û
>C000146
CP000512
Betaproteobacteria
Paracidovorax citrulli AAC00-1 [CP000512]
1604319
1604244
-
Gly
GCC
[Ensembl]
¡û
>C018597
CP000267
Betaproteobacteria
Rhodoferax ferrireducens T118 DSM 15236 [CP000267]
1681424
1681499
+
Gly
GCC
[Ensembl]
¡û
>C026296
CP000542
Betaproteobacteria
Verminephrobacter eiseniae EF01-2 [CP000542]
4824630
4824705
+
Gly
GCC
[Ensembl]
¡û
>WENV180019590
FTCD01000422
[FTCD] metagenome; soil
3215
3140
-
Gly
GCC
[ENA]
¢þ
>WENV180031787
FTJS01069320
[FTJS] metagenome; soil
459
384
-
Gly
GCC
[ENA]
¢þ
>w008228
AAJK01000019
Betaproteobacteria
Rhodoferax ferrireducens DSM 15236 [AAJK]
34036
33964
-
Gly
GCC
[ENA]
¡û
>WENV180256917
OBEQ010864916
[OBEQ] groundwater metagenome; groundwater
3
78
+
Gly
GCC
[ENA]
¢þ
>WENV180272680
OBEQ012405301
[OBEQ] groundwater metagenome; groundwater
146
71
-
Gly
GCC
[ENA]
¢þ
>WENV180353261
OBLQ010644629
[OBLQ] soil metagenome; soil
351
276
-
Gly
GCC
[ENA]
¢þ
>WENV180391136
OBPM01017703
[OBPM] marine metagenome; ENVO:00002010
63
138
+
Gly
GCC
[ENA]
¢þ
>WENV181165145
OEIR01615562
[OEIR] soil metagenome; soil
141
66
-
Gly
GCC
[ENA]
¢þ
>WENV181363105
OFOS01000012
[OFOS] sediment metagenome; Lake sediment
17456
17381
-
Gly
GCC
[ENA]
¢þ
>WENV181364642
OFPA01000011
[OFPA] sediment metagenome; Lake sediment
53199
53274
+
Gly
GCC
[ENA]
¢þ
>WENV181365324
OFPO01000056
[OFPO] sediment metagenome; Lake sediment
3957
4032
+
Gly
GCC
[ENA]
¢þ
>WENV181379663
OFRD01005558
[OFRD] wastewater metagenome; Exp Tend CN 100WW
417
342
-
Gly
GCC
[ENA]
¢þ
>W141241325
CAHF01000011
Betaproteobacteria
Noviherbaspirillum massiliense JC206 [CAHF]
69404
69479
+
Gly
GCC
[ENA]
¡û
>W141276680
JADZ01000012
Betaproteobacteria
Curvibacter gracilis ATCC BAA-807 [JADZ]
176719
176794
+
Gly
GCC
[ENA]
¡û
>W141276693
JADZ01000025
Betaproteobacteria
Curvibacter gracilis ATCC BAA-807 [JADZ]
35672
35747
+
Gly
GCC
[ENA]
¡û
>WENV183668440
ORJL010739646
[ORJL] groundwater metagenome; groundwater
3370
3295
-
Gly
GCC
[ENA]
¢þ
>WENV183736354
PJUC01001028
[PJUC] soil metagenome; Soil enriched on filter paper
5182
5257
+
Gly
GCC
[ENA]
¢þ
>WENV183741912
PJUH01000006
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
427993
428068
+
Gly
GCC
[ENA]
¢þ
>WENV183742937
PJUI01015722
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
32
107
+
Gly
GCC
[ENA]
¢þ
>WENV183749449
PPFU01171352
[PPFU] hypolithon metagenome; Antarctic Hypolithon
906
831
-
Gly
GCC
[ENA]
¢þ
>WENV170559006
CXWL01105497
[CXWL] groundwater metagenome; biofilm material
846
771
-
Gly
GCC
[ENA]
¢þ
>WENV170639617
JFJP01005396
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
16613
16538
-
Gly
GCC
[ENA]
¢þ
>WENV170639681
JFJP01005872
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
5827
5752
-
Gly
GCC
[ENA]
¢þ
>WENV170639693
JFJP01005958
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
6528
6603
+
Gly
GCC
[ENA]
¢þ
>WENV170639694
JFJP01005958
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
6642
6717
+
Gly
GCC
[ENA]
¢þ
>WENV170639697
JFJP01005966
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
1605
1530
-
Gly
GCC
[ENA]
¢þ
>WENV170639700
JFJP01005985
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
2083
2008
-
Gly
GCC
[ENA]
¢þ
>WENV170639701
JFJP01005985
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
1977
1902
-
Gly
GCC
[ENA]
¢þ
>WENV170639723
JFJP01006294
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
3907
3832
-
Gly
GCC
[ENA]
¢þ
>WENV170639766
JFJP01007243
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
139
64
-
Gly
GCC
[ENA]
¢þ
>WENV170639805
JFJP01008645
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
3757
3832
+
Gly
GCC
[ENA]
¢þ
>WENV170705388
LNAO01000032
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
4985
4910
-
Gly
GCC
[ENA]
¢þ
>WENV170705504
LNAO01001207
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2659
2584
-
Gly
GCC
[ENA]
¢þ
>WENV170705526
LNAO01001686
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
126
51
-
Gly
GCC
[ENA]
¢þ
>WENV170961936
MLJW01008579
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
27
102
+
Gly
GCC
[ENA]
¢þ
>WENV170961937
MLJW01008579
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
137
212
+
Gly
GCC
[ENA]
¢þ
>C191063794
CP029373
Betaproteobacteria
Paracidovorax citrulli M6 [CP029373]
3497001
3496926
-
Gly
GCC
-
¡û
>C191063796
CP029373
Betaproteobacteria
Paracidovorax citrulli M6 [CP029373]
3496684
3496609
-
Gly
GCC
-
¡û
>W09106089
AASX01000015
Betaproteobacteria
Paracidovorax citrulli subsp. citrulli AAC00-1 [AASX]
79271
79346
+
Gly
GCC
[ENA]
¡û
>W09106091
AASX01000015
Betaproteobacteria
Paracidovorax citrulli subsp. citrulli AAC00-1 [AASX]
79588
79663
+
Gly
GCC
[ENA]
¡û
>W09133912
ACQT01000031
Betaproteobacteria
Acidovorax delafieldii 2AN [ACQT]
16673
16598
-
Gly
GCC
[ENA]
¡û
>W09133914
ACQT01000031
Betaproteobacteria
Acidovorax delafieldii 2AN [ACQT]
16279
16204
-
Gly
GCC
[ENA]
¡û
>W1910179204
BJHU01000035
Betaproteobacteria
Acidovorax sp. NB1 [BJHU]
370484
370409
-
Gly
GCC
[ENA]
¡û
>W1910179206
BJHU01000035
Betaproteobacteria
Acidovorax sp. NB1 [BJHU]
370096
370021
-
Gly
GCC
[ENA]
¡û
>C141003875
CP004885
Betaproteobacteria
Candidatus Symbiobacter mobilis CR [CP004885]
422773
422848
+
Gly
GCC
[Ensembl]
¡û
>W1910792820
MRCN01000004
Betaproteobacteria
Variovorax boronicumulans ACN3 [MRCN]
296696
296621
-
Gly
GCC
[ENA]
¡û
>W1910792826
MRCN01000007
Betaproteobacteria
Variovorax boronicumulans ACN3 [MRCN]
227468
227543
+
Gly
GCC
[ENA]
¡û
>W1911496690
OCMW01000001
Betaproteobacteria
Variovorax sp. YR752 [OCMW]
3427412
3427487
+
Gly
GCC
[ENA]
¡û
>W1911496721
OCMW01000001
Betaproteobacteria
Variovorax sp. YR752 [OCMW]
226075
226000
-
Gly
GCC
[ENA]
¡û
>W1911768518
QXGR01000002
Betaproteobacteria
Simplicispira lacusdiani CPCC 100842 [QXGR]
398444
398369
-
Gly
GCC
[ENA]
¡û
>W1911768532
QXGR01000005
Betaproteobacteria
Simplicispira lacusdiani CPCC 100842 [QXGR]
284813
284738
-
Gly
GCC
[ENA]
¡û
>W1911768534
QXGR01000005
Betaproteobacteria
Simplicispira lacusdiani CPCC 100842 [QXGR]
284490
284415
-
Gly
GCC
[ENA]
¡û
>W1911770727
QXJC01000001
Betaproteobacteria
Simplicispira hankyongi NY-02 [QXJC]
969267
969192
-
Gly
GCC
[ENA]
¡û
>W1911770729
QXJC01000001
Betaproteobacteria
Simplicispira hankyongi NY-02 [QXJC]
968955
968880
-
Gly
GCC
[ENA]
¡û
>W1911775296
QXMN01000001
Betaproteobacteria
Acidovorax cavernicola 1011MAR4D40.2 [QXMN]
136519
136594
+
Gly
GCC
[ENA]
¡û
>W1911775311
QXMN01000012
Betaproteobacteria
Acidovorax cavernicola 1011MAR4D40.2 [QXMN]
95661
95586
-
Gly
GCC
[ENA]
¡û
>W1911802776
QYUO01000001
Betaproteobacteria
Noviherbaspirillum saxi K1R23-30 [QYUO]
1637771
1637846
+
Gly
GCC
[ENA]
¡û
>W1911802826
QYUO01000003
Betaproteobacteria
Noviherbaspirillum saxi K1R23-30 [QYUO]
207846
207771
-
Gly
GCC
[ENA]
¡û
>W1810046162
NNBQ01000001
Betaproteobacteria
Variovorax sp. B4 [NNBQ]
1454825
1454900
+
Gly
GCC
[ENA]
¡û
>W1810046196
NNBQ01000004
Betaproteobacteria
Variovorax sp. B4 [NNBQ]
909005
908930
-
Gly
GCC
[ENA]
¡û
>W1810071498
PEET01000001
Betaproteobacteria
Acidovorax sp. 59 [PEET]
2827346
2827271
-
Gly
GCC
[ENA]
¡û
>W1810071500
PEET01000001
Betaproteobacteria
Acidovorax sp. 59 [PEET]
2826957
2826882
-
Gly
GCC
[ENA]
¡û
>W1810089242
PGEP01000001
Betaproteobacteria
Acidovorax sp. 69 [PGEP]
3342866
3342791
-
Gly
GCC
[ENA]
¡û
>W1810089244
PGEP01000001
Betaproteobacteria
Acidovorax sp. 69 [PGEP]
3342475
3342400
-
Gly
GCC
[ENA]
¡û
>W1810192718
PKMT01000002
Betaproteobacteria
Variovorax sp. RO1 [PKMT]
368690
368615
-
Gly
GCC
[ENA]
¡û
>W1810192732
PKMT01000006
Betaproteobacteria
Variovorax sp. RO1 [PKMT]
188331
188406
+
Gly
GCC
[ENA]
¡û
>W1810195618
PKRR01000009
Betaproteobacteria
Uliginosibacterium sp. TH139 [PKRR]
4295
4220
-
Gly
GCC
[ENA]
¡û
>W1810195620
PKRR01000009
Betaproteobacteria
Uliginosibacterium sp. TH139 [PKRR]
4032
3957
-
Gly
GCC
[ENA]
¡û
>W1810392031
PXZZ01000005
Betaproteobacteria
Variovorax sp. WS11 [PXZZ]
195109
195034
-
Gly
GCC
[ENA]
¡û
>W1810392054
PXZZ01000034
Betaproteobacteria
Variovorax sp. WS11 [PXZZ]
41304
41379
+
Gly
GCC
[ENA]
¡û
>W1810474707
QAIM01000595
Betaproteobacteria
Acidovorax sp. HMWF018 [QAIM]
19845
19770
-
Gly
GCC
[ENA]
¡û
>W1810474709
QAIM01000595
Betaproteobacteria
Acidovorax sp. HMWF018 [QAIM]
19456
19381
-
Gly
GCC
[ENA]
¡û
>W1810486312
QAXU01000009
Betaproteobacteria
Acidovorax sp. CF301 [QAXU]
224696
224771
+
Gly
GCC
[ENA]
¡û
>W1810486314
QAXU01000009
Betaproteobacteria
Acidovorax sp. CF301 [QAXU]
261750
261825
+
Gly
GCC
[ENA]
¡û
>W1810570321
QEII01000290
Betaproteobacteria
Rhodoferax ferrireducens OTU1 [QEII]
179736
179811
+
Gly
GCC
[ENA]
¡û
>W1810573153
QEKN01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5684 [QEKN]
3937905
3937830
-
Gly
GCC
[ENA]
¡û
>W1810573155
QEKN01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5684 [QEKN]
3937588
3937513
-
Gly
GCC
[ENA]
¡û
>W1810577515
QEOH01000003
Betaproteobacteria
Variovorax sp. GV014 [QEOH]
293809
293884
+
Gly
GCC
[ENA]
¡û
>W1810577538
QEOH01000011
Betaproteobacteria
Variovorax sp. GV014 [QEOH]
212247
212322
+
Gly
GCC
[ENA]
¡û
>W1810594307
QFZK01000001
Betaproteobacteria
Rhodoferax lacus IMCC26218 [QFZK]
143226
143301
+
Gly
GCC
[ENA]
¡û
>W1810672530
QJTM01000003
Betaproteobacteria
Variovorax sp. GV035 [QJTM]
584620
584695
+
Gly
GCC
[ENA]
¡û
>W1810672549
QJTM01000013
Betaproteobacteria
Variovorax sp. GV035 [QJTM]
131839
131914
+
Gly
GCC
[ENA]
¡û
>W1810682476
QKUE01000004
Betaproteobacteria
Variovorax sp. GV004 [QKUE]
584620
584695
+
Gly
GCC
[ENA]
¡û
>W1810682486
QKUE01000012
Betaproteobacteria
Variovorax sp. GV004 [QKUE]
131839
131914
+
Gly
GCC
[ENA]
¡û
>W1810697081
QLTU01000013
Betaproteobacteria
Acidovorax defluvii DSM 12644 [QLTU]
91444
91369
-
Gly
GCC
[ENA]
¡û
>W1810697083
QLTU01000013
Betaproteobacteria
Acidovorax defluvii DSM 12644 [QLTU]
91050
90975
-
Gly
GCC
[ENA]
¡û
>W1810759452
QPJK01000014
Betaproteobacteria
Pseudorhodoferax soli DSM 21634 [QPJK]
160383
160458
+
Gly
GCC
[ENA]
¡û
>W1810759453
QPJK01000014
Betaproteobacteria
Pseudorhodoferax soli DSM 21634 [QPJK]
160508
160583
+
Gly
GCC
[ENA]
¡û
>W1810759454
QPJK01000014
Betaproteobacteria
Pseudorhodoferax soli DSM 21634 [QPJK]
160632
160707
+
Gly
GCC
[ENA]
¡û
>W1810885126
QUNC01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5596 [QUNC]
2946067
2946142
+
Gly
GCC
[ENA]
¡û
>W1810885128
QUNC01000001
Betaproteobacteria
Paracidovorax citrulli AAC00-1 #5596 [QUNC]
2946384
2946459
+
Gly
GCC
[ENA]
¡û
>W10110535
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
21286
21211
-
Gly
GCC
[ENA]
¡û
>W10110537
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
20969
20894
-
Gly
GCC
[ENA]
¡û
>C11100172
CP002521
Betaproteobacteria
Paracidovorax avenae ATCC 19860 [CP002521]
1660925
1660850
-
Gly
GCC
[Ensembl]
¡û
>C11100174
CP002521
Betaproteobacteria
Paracidovorax avenae ATCC 19860 [CP002521]
1660608
1660533
-
Gly
GCC
[Ensembl]
¡û
>W11112972
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
21286
21211
-
Gly
GCC
[ENA]
¡û
>W11112974
ADCB01000002
Betaproteobacteria
Paracidovorax avenae subsp. avenae ATCC 19860 [ADCB]
20969
20894
-
Gly
GCC
[ENA]
¡û
>W11114416
ADDK02000002
Betaproteobacteria
Azospira oryzae PS [ADDK]
502389
502464
+
Gly
GCC
[ENA]
¡û
>W11114419
ADDK02000002
Betaproteobacteria
Azospira oryzae PS [ADDK]
502731
502806
+
Gly
GCC
[ENA]
¡û
>W1510766081
JANU01000016
Betaproteobacteria
Caenimonas sp. SL110 [JANU]
146742
146667
-
Gly
GCC
[ENA]
¡û
>W1511503073
JXDJ01000024
Betaproteobacteria
Paracidovorax citrulli tw6 [JXDJ]
262175
262250
+
Gly
GCC
[ENA]
¡û
>W1511503075
JXDJ01000024
Betaproteobacteria
Paracidovorax citrulli tw6 [JXDJ]
262492
262567
+
Gly
GCC
[ENA]
¡û
>W1511508937
JXQQ01000048
Betaproteobacteria
Variovorax paradoxus MEDvA23 [JXQQ]
101692
101767
+
Gly
GCC
[ENA]
¡û
>W1511508939
JXQQ01000071
Betaproteobacteria
Variovorax paradoxus MEDvA23 [JXQQ]
67157
67082
-
Gly
GCC
[ENA]
¡û
>W1511518955
JXYQ01000082
Betaproteobacteria
Acidovorax temperans KY4 [JXYQ]
31436
31511
+
Gly
GCC
[ENA]
¡û
>W1511518957
JXYQ01000082
Betaproteobacteria
Acidovorax temperans KY4 [JXYQ]
31770
31845
+
Gly
GCC
[ENA]
¡û
>W1511527451
JYHM01000024
Betaproteobacteria
Paracidovorax citrulli pslbtw65 [JYHM]
440482
440407
-
Gly
GCC
[ENA]
¡û
>W1511527453
JYHM01000024
Betaproteobacteria
Paracidovorax citrulli pslbtw65 [JYHM]
440165
440090
-
Gly
GCC
[ENA]
¡û
>W1511554981
JZWI01000001
Betaproteobacteria
Variovorax paradoxus TBEA6 [JZWI]
13639
13564
-
Gly
GCC
[ENA]
¡û
>W1511554992
JZWI01000010
Betaproteobacteria
Variovorax paradoxus TBEA6 [JZWI]
4377
4302
-
Gly
GCC
[ENA]
¡û
>W11155837
AFAL01000358
Betaproteobacteria
Verminephrobacter aporrectodeae At4 [AFAL]
11943
11868
-
Gly
GCC
[ENA]
¡û
>W11156583
AFBH01000012
Betaproteobacteria
Acidovorax radicis N35v [AFBH]
339789
339864
+
Gly
GCC
[ENA]
¡û
>W11156585
AFBH01000012
Betaproteobacteria
Acidovorax radicis N35v [AFBH]
340181
340256
+
Gly
GCC
[ENA]
¡û
>W11170760
AFPT01000066
Betaproteobacteria
Paracidovorax oryzae subsp. avenae RS-1 [AFPT]
24496
24421
-
Gly
GCC
[ENA]
¡û
>W11170762
AFPT01000066
Betaproteobacteria
Paracidovorax oryzae subsp. avenae RS-1 [AFPT]
24179
24104
-
Gly
GCC
[ENA]
¡û
>C161040250
CP012157
Betaproteobacteria
Betaproteobacteria bacterium UKL13-2 [CP012157]
2370872
2370947
+
Gly
GCC
-
¡û
>W1610072188
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
2541290
2541215
-
Gly
GCC
[ENA]
¡û
>W1610072199
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
63142
63067
-
Gly
GCC
[ENA]
¡û
>W1610074361
BCWP01000025
Betaproteobacteria
Curvibacter delicatus NBRC 14919 [BCWP]
12873
12948
+
Gly
GCC
[ENA]
¡û
>W1610623704
LHUP01000175
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
33521
33596
+
Gly
GCC
[ENA]
¡û
>W1610623706
LHUP01000175
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
33911
33986
+
Gly
GCC
[ENA]
¡û
>W1610685601
LKTU01000026
Betaproteobacteria
Variovorax paradoxus [LKTU]
51422
51347
-
Gly
GCC
[ENA]
¡û
>W1610685604
LKTU01000029
Betaproteobacteria
Variovorax paradoxus [LKTU]
96335
96410
+
Gly
GCC
[ENA]
¡û
>W1610685739
LKTX01000013
Betaproteobacteria
Variovorax paradoxus [LKTX]
44779
44704
-
Gly
GCC
[ENA]
¡û
>W1610685741
LKTX01000014
Betaproteobacteria
Variovorax paradoxus [LKTX]
33308
33383
+
Gly
GCC
[ENA]
¡û
>W1610685797
LKTY01000043
Betaproteobacteria
Variovorax paradoxus [LKTY]
53608
53683
+
Gly
GCC
[ENA]
¡û
>W1610685816
LKTY01000079
Betaproteobacteria
Variovorax paradoxus [LKTY]
6499
6424
-
Gly
GCC
[ENA]
¡û
>W1610724823
LMEK01000012
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
418185
418260
+
Gly
GCC
[ENA]
¡û
>W1610725422
LMEV01000013
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
63541
63466
-
Gly
GCC
[ENA]
¡û
>W1610725435
LMEV01000017
Betaproteobacteria
Variovorax sp. Root473 [LMEV]
1759465
1759390
-
Gly
GCC
[ENA]
¡û
>W1610727710
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
228788
228863
+
Gly
GCC
[ENA]
¡û
>W1610727712
LMGP01000017
Betaproteobacteria
Acidovorax sp. Root568 [LMGP]
229177
229252
+
Gly
GCC
[ENA]
¡û
>W1610728985
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
37905
37980
+
Gly
GCC
[ENA]
¡û
>W1610728987
LMHQ01000003
Betaproteobacteria
Acidovorax sp. Root70 [LMHQ]
38296
38371
+
Gly
GCC
[ENA]
¡û
>W1610729594
LMIC01000044
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
314587
314512
-
Gly
GCC
[ENA]
¡û
>W1610729612
LMIC01000051
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
259636
259711
+
Gly
GCC
[ENA]
¡û
>W1610729798
LMIH01000008
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
20456
20381
-
Gly
GCC
[ENA]
¡û
>W1610729800
LMIH01000008
Betaproteobacteria
Acidovorax sp. Root217 [LMIH]
10030
9955
-
Gly
GCC
[ENA]
¡û
>W1610734795
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
157913
157838
-
Gly
GCC
[ENA]
¡û
>W1610734797
LMLZ01000021
Betaproteobacteria
Acidovorax sp. Leaf78 [LMLZ]
157519
157444
-
Gly
GCC
[ENA]
¡û
>W1610734958
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
243434
243359
-
Gly
GCC
[ENA]
¡û
>W1610734960
LMMC01000024
Betaproteobacteria
Acidovorax sp. Leaf84 [LMMC]
243043
242968
-
Gly
GCC
[ENA]
¡û
>W1610735833
LMMV01000001
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
363021
363096
+
Gly
GCC
[ENA]
¡û
>W1610738333
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
352968
352893
-
Gly
GCC
[ENA]
¡û
>W1610738335
LMOV01000024
Betaproteobacteria
Acidovorax sp. Leaf160 [LMOV]
352537
352462
-
Gly
GCC
[ENA]
¡û
>W1610739371
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
590837
590762
-
Gly
GCC
[ENA]
¡û
>W1610739373
LMPT01000019
Betaproteobacteria
Acidovorax sp. Leaf191 [LMPT]
590446
590371
-
Gly
GCC
[ENA]
¡û
>W1610753186
LNEG01000020
Betaproteobacteria
Burkholderiales bacterium Ga0074133 [LNEG]
150
225
+
Gly
GCC
[ENA]
¡û
>W1610912463
LSIH01000093
Betaproteobacteria
Acidovorax delafieldii [LSIH]
2653
2578
-
Gly
GCC
[ENA]
¡û
>W1610912465
LSIH01000093
Betaproteobacteria
Acidovorax delafieldii [LSIH]
2265
2190
-
Gly
GCC
[ENA]
¡û
>W1710069390
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
2541290
2541215
-
Gly
GCC
[ENA]
¡û
>W1710069401
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
63142
63067
-
Gly
GCC
[ENA]
¡û
>W1710071479
BCWP01000025
Betaproteobacteria
Curvibacter delicatus NBRC 14919 [BCWP]
12873
12948
+
Gly
GCC
[ENA]
¡û
>W1710512050
FMZC01000002
Betaproteobacteria
Paracidovorax valerianellae [FMZC]
222264
222189
-
Gly
GCC
[ENA]
¡û
>W1710512052
FMZC01000002
Betaproteobacteria
Paracidovorax valerianellae [FMZC]
221938
221863
-
Gly
GCC
[ENA]
¡û
>W1710512957
FMZU01000016
Betaproteobacteria
Variovorax sp. CF079 [FMZU]
108376
108451
+
Gly
GCC
[ENA]
¡û
>W1710519710
FNEY01000005
Betaproteobacteria
Paracidovorax citrulli [FNEY]
187073
187148
+
Gly
GCC
[ENA]
¡û
>W1710519712
FNEY01000005
Betaproteobacteria
Paracidovorax citrulli [FNEY]
187390
187465
+
Gly
GCC
[ENA]
¡û
>W1710532513
FNQJ01000007
Betaproteobacteria
Acidovorax soli [FNQJ]
55415
55490
+
Gly
GCC
[ENA]
¡û
>W1710532515
FNQJ01000007
Betaproteobacteria
Acidovorax soli [FNQJ]
55802
55877
+
Gly
GCC
[ENA]
¡û
>W1710539544
FNVM01000002
Betaproteobacteria
Variovorax sp. NFACC29 [FNVM]
89233
89158
-
Gly
GCC
[ENA]
¡û
>W1710539562
FNVM01000008
Betaproteobacteria
Variovorax sp. NFACC29 [FNVM]
242522
242597
+
Gly
GCC
[ENA]
¡û
>W1710542718
FNZJ01000006
Betaproteobacteria
Variovorax sp. OK202 [FNZJ]
297718
297793
+
Gly
GCC
[ENA]
¡û
>W1710558159
FOLP01000006
Betaproteobacteria
Variovorax sp. OK212 [FOLP]
297811
297886
+
Gly
GCC
[ENA]
¡û
>W1710561503
FOOF01000004
Betaproteobacteria
Duganella sp. CF458 [FOOF]
296959
296884
-
Gly
GCC
[ENA]
¡û
>W1710561519
FOOF01000006
Betaproteobacteria
Duganella sp. CF458 [FOOF]
227901
227976
+
Gly
GCC
[ENA]
¡û
>W1710562241
FOOV01000001
Betaproteobacteria
Variovorax sp. NFACC27 [FOOV]
562294
562369
+
Gly
GCC
[ENA]
¡û
>W1710562254
FOOV01000005
Betaproteobacteria
Variovorax sp. NFACC27 [FOOV]
242769
242844
+
Gly
GCC
[ENA]
¡û
>W1710571871
FOWG01000005
Betaproteobacteria
Variovorax sp. PDC80 [FOWG]
21095
21020
-
Gly
GCC
[ENA]
¡û
>W1710571888
FOWG01000024
Betaproteobacteria
Variovorax sp. PDC80 [FOWG]
8268
8193
-
Gly
GCC
[ENA]
¡û
>W1710572129
FOWL01000008
Betaproteobacteria
Variovorax sp. OK605 [FOWL]
299072
299147
+
Gly
GCC
[ENA]
¡û
>W1710754794
LHUP01000175
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
33521
33596
+
Gly
GCC
[ENA]
¡û
>W1710754796
LHUP01000175
Betaproteobacteria
Acidovorax sp. SD340 [LHUP]
33911
33986
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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