tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.375044 (125 seq.)
>W1710867183 LMIB01000012 Alphaproteobacteria Sphingomonas sp. Root710 [LMIB] 789409 789483 + Gly GCC [ENA] ¡û
>W1710869795 LMJZ01000023 Alphaproteobacteria Sphingomonas sp. Leaf5 [LMJZ] 93246 93320 + Gly GCC [ENA] ¡û
>W1710871830 LMLN01000003 Alphaproteobacteria Sphingomonas sp. Leaf62 [LMLN] 165659 165733 + Gly GCC [ENA] ¡û
>W1710913347 LNSJ01000022 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 14726 14800 + Gly GCC [ENA] ¡û
>W1711072240 LSHK01000033 Alphaproteobacteria Blastomonas sp. CCH8-E1 [LSHK] 1438 1364 - Gly GCC [ENA] ¡û
>W1711073509 LSIP01000743 Alphaproteobacteria Erythrobacter donghaensis [LSIP] 5781 5707 - Gly GCC [ENA] ¡û
>W1711074145 LSJG01000140 Alphaproteobacteria Porphyrobacter sp. CCH7-A1 [LSJG] 1438 1364 - Gly GCC [ENA] ¡û
>W1711074260 LSJJ01000068 Alphaproteobacteria Erythrobacter donghaensis [LSJJ] 49716 49790 + Gly GCC [ENA] ¡û
>W1711074418 LSJM01000459 Alphaproteobacteria Sphingomonas sp. CCH9-E2 [LSJM] 4022 4096 + Gly GCC [ENA] ¡û
>W1711075660 LSKP01000053 Alphaproteobacteria Sphingomonas sp. CCH13-B11 [LSKP] 7339 7265 - Gly GCC [ENA] ¡û
>W1711127851 LURA01000053 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 4940 4866 - Gly GCC [ENA] ¡û
>W1711127898 LURB01000071 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 3126 3200 + Gly GCC [ENA] ¡û
>W1711387049 MEGD01000020 Alphaproteobacteria Novosphingobium sp. SCN 66-18 [MEGD] 35544 35470 - Gly GCC [ENA] ¡û
>W1711503930 MKUB01000160 Alphaproteobacteria Sphingomonadales bacterium 63-6 [MKUB] 47630 47556 - Gly GCC [ENA] ¡û
>W1711511613 MLCO01000159 Alphaproteobacteria Pseudoroseomonas deserti M3 [MLCO] 10372 10446 + Gly GCC [ENA] ¡û
>W1711511614 MLCO01000159 Alphaproteobacteria Pseudoroseomonas deserti M3 [MLCO] 10566 10640 + Gly GCC [ENA] ¡û
>W1711577323 MNPS01000003 Alphaproteobacteria Saccharibacter sp. M18 [MNPS] 262704 262778 + Gly GCC [ENA] ¡û
>W1711577324 MNPS01000003 Alphaproteobacteria Saccharibacter sp. M18 [MNPS] 262817 262891 + Gly GCC [ENA] ¡û
>W1711942681 NBBI01000003 Alphaproteobacteria Sphingomonas dokdonensis [NBBI] 229772 229698 - Gly GCC [ENA] ¡û
>W1711959667 NBZE01000015 Alphaproteobacteria Allorhizobium ampelinum vitis [NBZE] 248534 248608 + Gly GCC [ENA] ¡û
>PL171000944 CP012917 Alphaproteobacteria Azospirillum brasilense Sp 7 plasmid:ABSP7_p3 55540 55614 + Gly GCC [ENA] ¡û
>PL171001744 FQ311873 Alphaproteobacteria Azospirillum lipoferum 4B plasmid:AZO_p5 390814 390740 - Gly GCC [ENA] ¡û
>C171049928 CP016460 Alphaproteobacteria Blastomonas sp. RAC04 [CP016460] 3635438 3635512 + Gly GCC - ¡û
>C171057363 CP017113 Alphaproteobacteria Porphyrobacter sp. LM 6 [CP017113] 683637 683563 - Gly GCC - ¡û
>C171063790 CP017578 Alphaproteobacteria Sphingomonas melonis TY [CP017578] 719987 719913 - Gly GCC - ¡û
>C171074630 CP018191 Alphaproteobacteria Granulibacter bethesdensis NIH9.1 [CP018191] 300882 300808 - Gly GCC - ¡û
>W131052383 AMYX01000032 Alphaproteobacteria alpha proteobacterium LLX12A [AMYX] 31304 31230 - Gly GCC [ENA] ¡û
>w016557 AAQG01000030 Alphaproteobacteria Sphingomonas sp. SKA58 [AAQG] 23289 23365 + Gly GCC [ENA] ¡û
>WENV180020778 FTDB01001494 [FTDB] metagenome; soil 25 99 + Gly GCC [ENA] ¢þ
>WENV180087064 MPME02046422 [MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter 578 504 - Gly GCC [ENA] ¢þ
>WENV180099390 NMRC01001098 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 888 814 - Gly GCC [ENA] ¢þ
>WENV180099631 NMRC01022014 [NMRC] plant metagenome; fluid collected inside the plant's pitcher 438 512 + Gly GCC [ENA] ¢þ
>WENV180114982 OAPS01088108 [OAPS] marine metagenome; sea water 485 411 - Gly GCC [ENA] ¢þ
>WENV180283707 OBID01001810 [OBID] metagenome; sludge 454 528 + Gly GCC [ENA] ¢þ
>W141090233 AUWY01000023 Alphaproteobacteria Sphingobium ummariense RL-3 [AUWY] 129246 129320 + Gly GCC [ENA] ¡û
>W141096505 AVFL01000001 Alphaproteobacteria Skermanella stibiiresistens SB22 [AVFL] 46405 46331 - Gly GCC [ENA] ¡û
>W141096541 AVFL01000025 Alphaproteobacteria Skermanella stibiiresistens SB22 [AVFL] 121048 120974 - Gly GCC [ENA] ¡û
>WENV181144600 OEHO01045472 [OEHO] metagenome; unknown 85 159 + Gly GCC [ENA] ¢þ
>WENV181155382 OEID01129879 [OEID] soil metagenome; soil 89 163 + Gly GCC [ENA] ¢þ
>WENV181185063 OELB01000244 [OELB] metagenome; 1998 1416 1342 - Gly GCC [ENA] ¢þ
>WENV181295684 OFHJ01000169 [OFHJ] soil metagenome; Clay 11595 11669 + Gly GCC [ENA] ¢þ
>WENV181296030 OFHJ01004608 [OFHJ] soil metagenome; Clay 1384 1310 - Gly GCC [ENA] ¢þ
>WENV181311886 OFJB01019322 [OFJB] sludge metagenome; sludge 1556 1630 + Gly GCC [ENA] ¢þ
>WENV181312081 OFJB01039878 [OFJB] sludge metagenome; sludge 846 920 + Gly GCC [ENA] ¢þ
>WENV181367239 OFPW01007355 [OFPW] freshwater metagenome; Freshwater Lake 166 92 - Gly GCC [ENA] ¢þ
>WENV181407391 OGCG01022773 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 1170 1244 + Gly GCC [ENA] ¢þ
>W141230388 BASZ01000004 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [BASZ] 61882 61808 - Gly GCC [ENA] ¡û
>W141241810 CAHP01000021 Alphaproteobacteria Magnetospirillum molischianum DSM 120 [CAHP] 108803 108877 + Gly GCC [ENA] ¡û
>WENV183724518 PJQE01025322 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 178 252 + Gly GCC [ENA] ¢þ
>WENV183728219 PJTQ01000002 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 875934 875860 - Gly GCC [ENA] ¢þ
>WENV183729021 PJTQ01002505 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1019 1093 + Gly GCC [ENA] ¢þ
>WENV183730368 PJTS01000001 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 233815 233889 + Gly GCC [ENA] ¢þ
>WENV183730486 PJTS01000054 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 4453 4527 + Gly GCC [ENA] ¢þ
>WENV183731488 PJTT01000008 [PJTT] soil metagenome; Soil (2) enriched on wood chips 269871 269797 - Gly GCC [ENA] ¢þ
>WENV183731589 PJTT01000038 [PJTT] soil metagenome; Soil (2) enriched on wood chips 233789 233863 + Gly GCC [ENA] ¢þ
>WENV183732921 PJTY01000001 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 740272 740198 - Gly GCC [ENA] ¢þ
>WENV183733175 PJTY01000212 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 15553 15479 - Gly GCC [ENA] ¢þ
>WENV183733176 PJTY01000212 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 15431 15357 - Gly GCC [ENA] ¢þ
>WENV183733280 PJTY01000662 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 5257 5331 + Gly GCC [ENA] ¢þ
>WENV170152174 CEOE01048008 [CEOE] marine metagenome genome assembly TARA_025_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2685 2759 + Gly GCC [ENA] ¢þ
>WENV170255888 CEQX01032146 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2036 2110 + Gly GCC [ENA] ¢þ
>WENV170264717 CERD01062192 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4169 4095 - Gly GCC [ENA] ¢þ
>WENV170265119 CERD01109864 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 293 367 + Gly GCC [ENA] ¢þ
>WENV170706731 LNAP01005930 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1703 1629 - Gly GCC [ENA] ¢þ
>WENV170707491 LNAP01022514 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2613 2539 - Gly GCC [ENA] ¢þ
>WENV170759581 LUMT01000016 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 163804 163878 + Gly GCC [ENA] ¢þ
>WENV170830135 MDSZ01021694 [MDSZ] marine metagenome; seawater 18 92 + Gly GCC [ENA] ¢þ
>WENV170834782 MDSZ01102578 [MDSZ] marine metagenome; seawater 1753 1827 + Gly GCC [ENA] ¢þ
>WENV170837379 MDSZ01148298 [MDSZ] marine metagenome; seawater 3679 3753 + Gly GCC [ENA] ¢þ
>WENV170840581 MDSZ01207192 [MDSZ] marine metagenome; seawater 22 96 + Gly GCC [ENA] ¢þ
>WENV170845211 MDTA01019860 [MDTA] marine metagenome; seawater 4604 4530 - Gly GCC [ENA] ¢þ
>WENV170846613 MDTA01045603 [MDTA] marine metagenome; seawater 5245 5171 - Gly GCC [ENA] ¢þ
>WENV170848141 MDTA01073614 [MDTA] marine metagenome; seawater 6044 5970 - Gly GCC [ENA] ¢þ
>WENV170854622 MDTA01191745 [MDTA] marine metagenome; seawater 10995 11069 + Gly GCC [ENA] ¢þ
>W141484976 JFZA02000004 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [JFZA] 76046 76120 + Gly GCC [ENA] ¡û
>C181003245 AP017655 Alphaproteobacteria Sphingobium cloacae JCM 10874 [AP017655] 2751716 2751790 + Gly GCC - ¡û
>C191178657 CP040517 Alphaproteobacteria Luteithermobacter gelatinilyticus MEBiC09520 [CP040517] 359287 359213 - Gly GCC - ¡û
>W09106530 AAVK01000010 Alphaproteobacteria Rhizorhabdus wittichii RW1 [AAVK] 120766 120840 + Gly GCC [ENA] ¡û
>W1910548727 FZOS01000024 Alphaproteobacteria Sphingomonas laterariae LNB2 [FZOS] 16846 16772 - Gly GCC [ENA] ¡û
>W1911391041 NWBU01000004 Alphaproteobacteria Sphingomonas oleivorans FW-11 [NWBU] 1041524 1041450 - Gly GCC [ENA] ¡û
>W1911398122 NWMW01000002 Alphaproteobacteria Sphingomonas spermidinifaciens 9NM-10 [NWMW] 12794 12868 + Gly GCC [ENA] ¡û
>W1911688123 QLJG01000007 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG] 184870 184944 + Gly GCC [ENA] ¡û
>W1911718628 QQWM01000027 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM] 18857 18783 - Gly GCC [ENA] ¡û
>W1911718761 QQWP01000016 Alphaproteobacteria Sphingomonas koreensis SK-NY1_0417 [QQWP] 88926 88852 - Gly GCC [ENA] ¡û
>W1911719077 QQWW01000006 Alphaproteobacteria Sphingomonas sp. ABOLG ABOLG S-NIH.Pt13_0512 [QQWW] 167366 167440 + Gly GCC [ENA] ¡û
>W1911721465 QQZA01000007 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA] 185063 185137 + Gly GCC [ENA] ¡û
>W1911721800 QQZH01000012 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH] 16831 16905 + Gly GCC [ENA] ¡û
>W1810062342 PDOA01000043 Alphaproteobacteria Pseudoroseomonas aestuarii JR1/69-1-13 [PDOA] 8192 8266 + Gly GCC [ENA] ¡û
>W1810107972 PHFW01000003 Alphaproteobacteria Sphingopyxis lindanitolerans WS5A3p [PHFW] 35107 35181 + Gly GCC [ENA] ¡û
>W1810463400 PZZN01000001 Alphaproteobacteria Sphingomonas aerolata NW12 [PZZN] 1410438 1410512 + Gly GCC [ENA] ¡û
>W1810724734 QOBC01000016 Alphaproteobacteria Sphingomonas paucimobilis AIMST S2 [QOBC] 12179 12253 + Gly GCC [ENA] ¡û
>C151004102 CP003182 Alphaproteobacteria Granulibacter bethesdensis CGDNIH4 [CP003182] 297606 297532 - Gly GCC [Ensembl] ¡û
>C151048363 CP009291 Alphaproteobacteria Novosphingobium pentaromativorans US6-1 [CP009291] 2672972 2673046 + Gly GCC [Ensembl] ¡û
>C151054343 CP009571 Alphaproteobacteria Sphingomonas taxi ATCC 55669 [CP009571] 3151307 3151381 + Gly GCC [Ensembl] ¡û
>C151086222 CP011770 Alphaproteobacteria Croceicoccus naphthovorans PQ-2 [CP011770] 568447 568373 - Gly GCC [Ensembl] ¡û
>W1510013715 BBPI01000043 Alphaproteobacteria Sphingomonas parapaucimobilis NBRC 15100 [BBPI] 2427 2501 + Gly GCC [ENA] ¡û
>W1510024381 CCBH010000142 Alphaproteobacteria Novosphingobium sp. KN65.2 [CCBH] 18108 18182 + Gly GCC [ENA] ¡û
>W1511564912 LAEL01000001 Alphaproteobacteria Azospirillum thiophilum DSM 21654 [LAEL] 1559735 1559661 - Gly GCC [ENA] ¡û
>W1511564920 LAEL01000001 Alphaproteobacteria Azospirillum thiophilum DSM 21654 [LAEL] 1147089 1147015 - Gly GCC [ENA] ¡û
>W1511564950 LAEL01000005 Alphaproteobacteria Azospirillum thiophilum DSM 21654 [LAEL] 105374 105448 + Gly GCC [ENA] ¡û
>C121017692 HE577327 Alphaproteobacteria Azospirillum baldaniorum Sp245 [HE577327] 17144 17218 + Gly GCC [Ensembl] ¡û
>C161043666 CP012700 Alphaproteobacteria Sphingopyxis macrogoltabida EY-1 [CP012700] 3983116 3983042 - Gly GCC [Ensembl] ¡û
>W121046788 AIDW01000003 Alphaproteobacteria Sphingomonas sp. PAMC 26621 [AIDW] 112596 112522 - Gly GCC [ENA] ¡û
>W121084340 AKIB01000083 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 12381 12307 - Gly GCC [ENA] ¡û
>W1610071393 BCUA01000132 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 855 929 + Gly GCC [ENA] ¡û
>W1610071997 BCUM01000117 Alphaproteobacteria Sphingobium cloacae NBRC 102517 [BCUM] 1571 1497 - Gly GCC [ENA] ¡û
>W1610729529 LMIB01000012 Alphaproteobacteria Sphingomonas sp. Root710 [LMIB] 789409 789483 + Gly GCC [ENA] ¡û
>W1610732141 LMJZ01000023 Alphaproteobacteria Sphingomonas sp. Leaf5 [LMJZ] 93246 93320 + Gly GCC [ENA] ¡û
>W1610734176 LMLN01000003 Alphaproteobacteria Sphingomonas sp. Leaf62 [LMLN] 165659 165733 + Gly GCC [ENA] ¡û
>W1610771706 LNSJ01000022 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 14726 14800 + Gly GCC [ENA] ¡û
>W1610911500 LSHK01000033 Alphaproteobacteria Blastomonas sp. CCH8-E1 [LSHK] 1438 1364 - Gly GCC [ENA] ¡û
>W1610912814 LSIP01000743 Alphaproteobacteria Erythrobacter donghaensis [LSIP] 5781 5707 - Gly GCC [ENA] ¡û
>W1610913450 LSJG01000140 Alphaproteobacteria Porphyrobacter sp. CCH7-A1 [LSJG] 1438 1364 - Gly GCC [ENA] ¡û
>W1610913565 LSJJ01000068 Alphaproteobacteria Erythrobacter donghaensis [LSJJ] 49716 49790 + Gly GCC [ENA] ¡û
>W1610913723 LSJM01000459 Alphaproteobacteria Sphingomonas sp. CCH9-E2 [LSJM] 4022 4096 + Gly GCC [ENA] ¡û
>W1610914965 LSKP01000053 Alphaproteobacteria Sphingomonas sp. CCH13-B11 [LSKP] 7339 7265 - Gly GCC [ENA] ¡û
>W1610938965 LURA01000053 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 4940 4866 - Gly GCC [ENA] ¡û
>W1610939012 LURB01000071 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 3126 3200 + Gly GCC [ENA] ¡û
>WENV077933 AAFX01128679 Soil microbial communities from Minnesota Farm 278 352 + Gly GCC [ENA]
>WENV077941 AAFX01131843 Soil microbial communities from Minnesota Farm 226 150 - Gly GCC [ENA]
>W1710068758 BCUA01000132 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 855 929 + Gly GCC [ENA] ¡û
>W1710069199 BCUM01000117 Alphaproteobacteria Sphingobium cloacae NBRC 102517 [BCUM] 1571 1497 - Gly GCC [ENA] ¡û
>W1710509119 FMWX01000006 Alphaproteobacteria Sphingomonas sp. NFR15 [FMWX] 211171 211245 + Gly GCC [ENA] ¡û
>W1710512377 FMZJ01000005 Alphaproteobacteria Sphingomonas sp. YR710 [FMZJ] 191133 191207 + Gly GCC [ENA] ¡û
>W1710542342 FNZB01000002 Alphaproteobacteria Sphingomonas sp. OV641 [FNZB] 286049 285975 - Gly GCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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