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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.379587 (5 seq.)
>W1711419362
MHPI01000028
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_32_11 [MHPI]
34436
34510
+
Met
CAT
[ENA]
¡û
>W1711419454
MHPL01000012
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYB2_FULL_32_9 [MHPL]
2598
2672
+
Met
CAT
[ENA]
¡û
>W1711419627
MHPR01000002
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYC2_FULL_32_10 [MHPR]
33084
33158
+
Met
CAT
[ENA]
¡û
>W1711419732
MHPU01000031
Unclassified
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_32_13 [MHPU]
2589
2663
+
Met
CAT
[ENA]
¡û
>W1511596531
LBOJ01000011
Unclassified
Parcubacteria group bacterium GW2011_GWC2_32_10 GW2011_GWC2_32_10 [LBOJ]
2612
2686
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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