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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.380607 (6 seq.)
>C191001312
AP018335
Bacillota
Ureibacillus thermosphaericus A1 [AP018335]
3340222
3340147
-
Phe
GAA
-
¡û
>C191001335
AP018335
Bacillota
Ureibacillus thermosphaericus A1 [AP018335]
2858409
2858336
-
Phe
GAA
-
¡û
>C191001355
AP018335
Bacillota
Ureibacillus thermosphaericus A1 [AP018335]
2856447
2856374
-
Phe
GAA
-
¡û
>W1910004435
AVCZ01000103
Bacillota
Ureibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 [AVCZ]
1097
1022
-
Phe
GAA
[ENA]
¡û
>W1911495142
OBMQ01000001
Bacillota
Ureibacillus xyleni JC22 [OBMQ]
528
603
+
Phe
GAA
[ENA]
¡û
>W1911495160
OBMQ01000006
Bacillota
Ureibacillus xyleni JC22 [OBMQ]
1353
1428
+
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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