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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.380701 (3 seq.)
>W1910733179
MHIF01000038
Unclassified
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_46_12 [MHIF]
285
211
-
Asn
GTT
[ENA]
¡û
>W1910733336
MHIK01000017
Unclassified
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_45_11b [MHIK]
8441
8515
+
Asn
GTT
[ENA]
¡û
>W1910733552
MHIR01000023
Unclassified
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_02_FULL_46_11b [MHIR]
561
487
-
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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