tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.385404 (116 seq.)
>W1710785603 LJHZ01000099 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 9119 9193 + Glu CTC [ENA] ¡û
>W1710856900 LLZS01000006 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 296986 296912 - Glu CTC [ENA] ¡û
>W1710912675 LNRU01000010 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 13600 13526 - Glu CTC [ENA] ¡û
>W1710912721 LNRV01000029 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 13600 13526 - Glu CTC [ENA] ¡û
>W1710912764 LNRW01000028 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 44029 44103 + Glu CTC [ENA] ¡û
>W1710912809 LNRX01000029 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 13619 13545 - Glu CTC [ENA] ¡û
>W1710912837 LNRY01000008 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 154433 154507 + Glu CTC [ENA] ¡û
>W1710912901 LNRZ01000012 Alphaproteobacteria Sphingopyxis sp. H050 [LNRZ] 66863 66937 + Glu CTC [ENA] ¡û
>W1710912926 LNSA01000006 Alphaproteobacteria Sphingopyxis sp. H115 [LNSA] 14778 14704 - Glu CTC [ENA] ¡û
>W1710912951 LNSB01000001 Alphaproteobacteria Sphingopyxis sp. HIX [LNSB] 26370 26296 - Glu CTC [ENA] ¡û
>W1710913091 LNSE01000002 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 256904 256830 - Glu CTC [ENA] ¡û
>W1710913136 LNSF01000002 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 466304 466230 - Glu CTC [ENA] ¡û
>W1710913181 LNSG01000002 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 466304 466230 - Glu CTC [ENA] ¡û
>W1710913266 LNSI01000001 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 85337 85411 + Glu CTC [ENA] ¡û
>W1710927017 LOEX01000052 Alphaproteobacteria Sphingomonadales bacterium BRH_c42 [LOEX] 18163 18089 - Glu CTC [ENA] ¡û
>W1711051705 LRSE01000007 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 116455 116529 + Glu CTC [ENA] ¡û
>W1711072885 LSIA01000020 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 47962 47888 - Glu CTC [ENA] ¡û
>W1711089901 LTAB01000025 Alphaproteobacteria Sphingobium sp. 22B [LTAB] 61759 61833 + Glu CTC [ENA] ¡û
>W1711227780 LXVX01000012 Alphaproteobacteria Sphingobium sp. TCM1 [LXVX] 284896 284822 - Glu CTC [ENA] ¡û
>W1711250036 LYMJ01000014 Alphaproteobacteria Sphingobium sp. 20006FA paucimobilis [LYMJ] 115391 115317 - Glu CTC [ENA] ¡û
>W1711253314 LYPP01000001 Alphaproteobacteria Croceicoccus marinus [LYPP] 897333 897259 - Glu CTC [ENA] ¡û
>W1711259800 LYVN01000160 Alphaproteobacteria Sphingopyxis sp. KK2 [LYVN] 4552 4478 - Glu CTC [ENA] ¡û
>W1711261660 LYWY01000018 Alphaproteobacteria Croceicoccus pelagius [LYWY] 103590 103664 + Glu CTC [ENA] ¡û
>W1711261748 LYWZ01000027 Alphaproteobacteria Croceicoccus mobilis [LYWZ] 135659 135733 + Glu CTC [ENA] ¡û
>W1711386373 MEFG01000021 Alphaproteobacteria Sphingomonas sp. SCN 67-18 [MEFG] 52316 52390 + Glu CTC [ENA] ¡û
>W1711386422 MEFH01000081 Alphaproteobacteria Sphingopyxis sp. SCN 67-31 [MEFH] 22582 22656 + Glu CTC [ENA] ¡û
>W1711434819 MINO01000021 Alphaproteobacteria Sphingobium phenoxybenzoativorans [MINO] 54152 54226 + Glu CTC [ENA] ¡û
>W1711506361 MKWI01000016 Alphaproteobacteria Sphingobium sp. 66-54 [MKWI] 318619 318545 - Glu CTC [ENA] ¡û
>C171019725 CP013070 Alphaproteobacteria Sphingobium indicum B90A [CP013070] 1018734 1018660 - Glu CTC - ¡û
>WENV180038970 LLBY010016799 [LLBY] soil metagenome; soil from tomato rhizosphere 3205 3279 + Glu CTC [ENA] ¢þ
>WENV180040741 LLBZ010010250 [LLBZ] soil metagenome; soil from tomato rhizosphere 15407 15333 - Glu CTC [ENA] ¢þ
>W141076314 ATDP01000072 Alphaproteobacteria Sphingobium lactosutens DS20 [ATDP] 57460 57534 + Glu CTC [ENA] ¡û
>W141078471 ATIB01000084 Alphaproteobacteria Sphingobium baderi LL03 [ATIB] 15053 14979 - Glu CTC [ENA] ¡û
>WENV181222766 OFDC01000236 [OFDC] hot springs metagenome; Water 129 203 + Glu CTC [ENA] ¢þ
>WENV181222773 OFDC01000239 [OFDC] hot springs metagenome; Water 35834 35908 + Glu CTC [ENA] ¢þ
>W141231016 BATN01000001 Alphaproteobacteria Sphingobium fuliginis KK22 [BATN] 62311 62237 - Glu CTC [ENA] ¡û
>W141285078 JANF02000047 Alphaproteobacteria Sphingobium indicum F2 [JANF] 28901 28975 + Glu CTC [ENA] ¡û
>ENV08000107 ABLW01025087 viral fraction from Gulf of Mexico 115 41 - Glu CTC [ENA] ¡û
>ENV08000253 ABLY01120107 viral fraction from Arctic Ocean 94 20 - Glu CTC [ENA] ¡û
>WENV183733972 PJTZ01000010 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 288567 288641 + Glu CTC [ENA] ¢þ
>WENV183738545 PJUE01000015 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 151334 151260 - Glu CTC [ENA] ¢þ
>WENV183739606 PJUE01039590 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 186 112 - Glu CTC [ENA] ¢þ
>WENV183749654 PPFU01196893 [PPFU] hypolithon metagenome; Antarctic Hypolithon 7789 7863 + Glu CTC [ENA] ¢þ
>WENV170193606 CEPH01158648 [CEPH] marine metagenome genome assembly TARA_048_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1000 926 - Glu CTC [ENA] ¢þ
>W141400552 JDRU02000560 Alphaproteobacteria Sphingomonas sp. BHC-A [JDRU] 11687 11613 - Glu CTC [ENA] ¡û
>WENV170309391 CESL01136092 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 216 142 - Glu CTC [ENA] ¢þ
>WENV170373703 CETT01012340 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 366 440 + Glu CTC [ENA] ¢þ
>WENV170578091 FSSH01015013 [FSSH] freshwater metagenome; drinking water 677 751 + Glu CTC [ENA] ¢þ
>WENV170596680 FUIF01009205 [FUIF] marine metagenome; marine 8342 8416 + Glu CTC [ENA] ¢þ
>WENV170596682 FUIF01009217 [FUIF] marine metagenome; marine 938 1012 + Glu CTC [ENA] ¢þ
>WENV170727701 LULE01001370 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 2413 2487 + Glu CTC [ENA] ¢þ
>WENV171003508 NNBU01000230 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 62562 62488 - Glu CTC [ENA] ¢þ
>WENV171003923 NNBV01004670 [NNBV] plant metagenome; symbiotic tissue sample KVS11 62462 62536 + Glu CTC [ENA] ¢þ
>W141484895 JFYY01000011 Alphaproteobacteria Sphingomonas paucimobilis [JFYY] 57573 57499 - Glu CTC [ENA] ¡û
>C191003776 AP018664 Alphaproteobacteria Sphingobium amiense DSM 16289 [AP018664] 1679132 1679206 + Glu CTC - ¡û
>C191155748 CP037948 Alphaproteobacteria Qipengyuania sediminis CGMCC 1.12928 [CP037948] 847891 847965 + Glu CTC - ¡û
>C191170973 CP039695 Alphaproteobacteria Novosphingobium sp. EMRT-2 [CP039695] 3512366 3512292 - Glu CTC - ¡û
>W09100330 AAAV03000005 Alphaproteobacteria Novosphingobium aromaticivorans DSM 12444 [AAAV] 73575 73649 + Glu CTC [ENA] ¡û
>W09102958 AAIP01000009 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [AAIP] 48100 48026 - Glu CTC [ENA] ¡û
>W141726125 JNAC01000024 Alphaproteobacteria Sphingobium sp. DC-2 [JNAC] 119762 119688 - Glu CTC [ENA] ¡û
>W1910649287 LXYF01000026 Alphaproteobacteria Sphingobium sp. SA916 [LXYF] 35828 35754 - Glu CTC [ENA] ¡û
>W1910822172 MWMO01000015 Alphaproteobacteria Novosphingobium sp. PC22D [MWMO] 44535 44461 - Glu CTC [ENA] ¡û
>W1910889696 NETV01000001 Alphaproteobacteria Sphingobium sp. LB126 [NETV] 330263 330337 + Glu CTC [ENA] ¡û
>W1910934257 NIWD01000009 Alphaproteobacteria Sphingopyxis sp. GW247-27LB [NIWD] 565798 565872 + Glu CTC [ENA] ¡û
>W1911495399 OBMU01000001 Alphaproteobacteria Novosphingobium sp. Chol11 [OBMU] 1716504 1716578 + Glu CTC [ENA] ¡û
>W1810195672 PKRT01000001 Alphaproteobacteria Novosphingobium sp. TH158 [PKRT] 632075 632149 + Glu CTC [ENA] ¡û
>C151082939 CP011452 Alphaproteobacteria Croceibacterium atlanticum 26DY36 [CP011452] 387091 387017 - Glu CTC - ¡û
>W1510015802 BBRO01000001 Alphaproteobacteria Sphingopyxis sp. C-1 [BBRO] 2229 2155 - Glu CTC [ENA] ¡û
>W10126769 AEDK01000002 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [AEDK] 960710 960636 - Glu CTC [ENA] ¡û
>C10111665 AP010803 Alphaproteobacteria Sphingobium indicum UT26S [AP010803, AP010804] 2104799 2104873 + Glu CTC [Ensembl] ¡û
>W1510757079 JACV01000020 Alphaproteobacteria Sphingobium baderi LL03 [JACV] 17987 18061 + Glu CTC [ENA] ¡û
>W1511221180 JNFC01000050 Alphaproteobacteria Sphingopyxis sp. LC363 [JNFC] 6760 6834 + Glu CTC [ENA] ¡û
>W1511356990 JRVC01000002 Alphaproteobacteria Novosphingobium subterraneum DSM 12447 [JRVC] 202993 203067 + Glu CTC [ENA] ¡û
>C11119812 CP002798 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [CP002798, CP002799] 339182 339108 - Glu CTC [Ensembl] ¡û
>C11121292 AP012222 Alphaproteobacteria Sphingobium sp. SYK-6 [AP012222] 1563660 1563586 - Glu CTC [Ensembl] ¡û
>W11134030 AEDK01000002 Alphaproteobacteria Sphingobium chlorophenolicum L-1 [AEDK] 960710 960636 - Glu CTC [ENA] ¡û
>W1511590514 LBHB01000001 Alphaproteobacteria Aurantiacibacter luteus KA37 [LBHB] 884424 884498 + Glu CTC [ENA] ¡û
>W1511646481 LECE01000072 Alphaproteobacteria Sphingomonas sp. MEA3-1 [LECE] 24102 24176 + Glu CTC [ENA] ¡û
>C161021397 CP009429 Alphaproteobacteria Sphingopyxis macrogoltabida 203 [CP009429] 5059518 5059444 - Glu CTC [Ensembl] ¡û
>C161040526 CP012199 Alphaproteobacteria Sphingopyxis granuli TFA [CP012199] 740508 740434 - Glu CTC [Ensembl] ¡û
>C161099954 CP016591 Alphaproteobacteria Tsuneonella dongtanensis KCTC 22672 [CP016591] 2109566 2109492 - Glu CTC [Ensembl] ¡û
>W121071162 AJXQ01000133 Alphaproteobacteria Sphingobium indicum B90A [AJXQ] 6616 6690 + Glu CTC [ENA] ¡û
>W1610076482 BCYT01000021 Alphaproteobacteria Sphingobium abikonense NBRC 16140 [BCYT] 56639 56713 + Glu CTC [ENA] ¡û
>W1610076905 BCZC01000098 Alphaproteobacteria Sphingobium chlorophenolicum NBRC 16172 [BCZC] 17869 17943 + Glu CTC [ENA] ¡û
>W1610076941 BCZD01000008 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [BCZD] 63641 63567 - Glu CTC [ENA] ¡û
>W1610609155 LFVX01000013 Alphaproteobacteria Sphingobium sp. Ndbn-10 [LFVX] 30188 30262 + Glu CTC [ENA] ¡û
>W1610649409 LJHZ01000099 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 9119 9193 + Glu CTC [ENA] ¡û
>W1610719281 LLZS01000006 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 296986 296912 - Glu CTC [ENA] ¡û
>W1610771034 LNRU01000010 Alphaproteobacteria Sphingopyxis sp. H053 [LNRU] 13600 13526 - Glu CTC [ENA] ¡û
>W1610771080 LNRV01000029 Alphaproteobacteria Sphingopyxis sp. H077 [LNRV] 13600 13526 - Glu CTC [ENA] ¡û
>W1610771123 LNRW01000028 Alphaproteobacteria Sphingopyxis sp. H080 [LNRW] 44029 44103 + Glu CTC [ENA] ¡û
>W1610771168 LNRX01000029 Alphaproteobacteria Sphingopyxis sp. H085 [LNRX] 13619 13545 - Glu CTC [ENA] ¡û
>W1610771196 LNRY01000008 Alphaproteobacteria Sphingopyxis sp. H093 [LNRY] 154433 154507 + Glu CTC [ENA] ¡û
>W1610771260 LNRZ01000012 Alphaproteobacteria Sphingopyxis sp. H050 [LNRZ] 66863 66937 + Glu CTC [ENA] ¡û
>W1610771285 LNSA01000006 Alphaproteobacteria Sphingopyxis sp. H115 [LNSA] 14778 14704 - Glu CTC [ENA] ¡û
>W1610771310 LNSB01000001 Alphaproteobacteria Sphingopyxis sp. HIX [LNSB] 26370 26296 - Glu CTC [ENA] ¡û
>W1610771450 LNSE01000002 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 256904 256830 - Glu CTC [ENA] ¡û
>W1610771495 LNSF01000002 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 466304 466230 - Glu CTC [ENA] ¡û
>W1610771540 LNSG01000002 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 466304 466230 - Glu CTC [ENA] ¡û
>W1610771625 LNSI01000001 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 85337 85411 + Glu CTC [ENA] ¡û
>W1610784559 LOEX01000052 Alphaproteobacteria Sphingomonadales bacterium BRH_c42 [LOEX] 18163 18089 - Glu CTC [ENA] ¡û
>W1610892834 LRSE01000007 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 116455 116529 + Glu CTC [ENA] ¡û
>W1610912145 LSIA01000020 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 47962 47888 - Glu CTC [ENA] ¡û
>W1610924245 LTAB01000025 Alphaproteobacteria Sphingobium sp. 22B [LTAB] 61759 61833 + Glu CTC [ENA] ¡û
>W1611011744 LXVX01000012 Alphaproteobacteria Sphingobium sp. TCM1 [LXVX] 284896 284822 - Glu CTC [ENA] ¡û
>W1611016918 LYMJ01000014 Alphaproteobacteria Sphingobium sp. 20006FA paucimobilis [LYMJ] 115391 115317 - Glu CTC [ENA] ¡û
>W1611017851 LYPP01000001 Alphaproteobacteria Croceicoccus marinus [LYPP] 897333 897259 - Glu CTC [ENA] ¡û
>W1611023635 LYWY01000018 Alphaproteobacteria Croceicoccus pelagius [LYWY] 103590 103664 + Glu CTC [ENA] ¡û
>W1611023723 LYWZ01000027 Alphaproteobacteria Croceicoccus mobilis [LYWZ] 135659 135733 + Glu CTC [ENA] ¡û
>W1710074171 BCYT01000021 Alphaproteobacteria Sphingobium abikonense NBRC 16140 [BCYT] 56639 56713 + Glu CTC [ENA] ¡û
>W1710074594 BCZC01000098 Alphaproteobacteria Sphingobium chlorophenolicum NBRC 16172 [BCZC] 17869 17943 + Glu CTC [ENA] ¡û
>W1710074630 BCZD01000008 Alphaproteobacteria Sphingobium herbicidovorans NBRC 16415 [BCZD] 63641 63567 - Glu CTC [ENA] ¡û
>W1710505617 FMTU01000015 Alphaproteobacteria Sphingobium faniae [FMTU] 3556 3482 - Glu CTC [ENA] ¡û
>W1710507981 FMVR01000003 Alphaproteobacteria Novosphingobium aromaticivorans stygium [FMVR] 81070 81144 + Glu CTC [ENA] ¡û
>W1710606006 FWXL01000011 Alphaproteobacteria Novosphingobium sp. B1 [FWXL] 58966 59040 + Glu CTC [ENA] ¡û
>W1710730442 LFVX01000013 Alphaproteobacteria Sphingobium sp. Ndbn-10 [LFVX] 30188 30262 + Glu CTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK