Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.385980 (132 seq.)
	>W131064913	ANMM01000027	Bacillota	Lacticaseibacillus paracasei subsp. paracasei Lpp225 [ANMM]	34617	34544	-	Glu	TTC	[ENA]	○
	>W131064928	ANMM01000033	Bacillota	Lacticaseibacillus paracasei subsp. paracasei Lpp225 [ANMM]	12906	12833	-	Glu	TTC	[ENA]	○
	>W131156305	AQPP01000007	Bacillota	Lacticaseibacillus paracasei LcA [AQPP]	1192	1265	+	Glu	TTC	[ENA]	○
	>W131156332	AQPP01000009	Bacillota	Lacticaseibacillus paracasei LcA [AQPP]	598169	598096	-	Glu	TTC	[ENA]	○
	>W1711110869	LTVY01000052	Bacillota	Lactobacillus sp. HMSC073B09 [LTVY]	2515	2442	-	Glu	TTC	[ENA]	○
	>W1711110896	LTVY01000113	Bacillota	Lactobacillus sp. HMSC073B09 [LTVY]	214	141	-	Glu	TTC	[ENA]	○
	>W1711121019	LUHM01000005	Bacillota	Lactiplantibacillus paraplantarum [LUHM]	313448	313521	+	Glu	TTC	[ENA]	○
	>W1711185648	LWNO01000115	Bacillota	Lactobacillus sp. HMSC17G08 [LWNO]	2515	2442	-	Glu	TTC	[ENA]	○
	>W1711185662	LWNO01000120	Bacillota	Lactobacillus sp. HMSC17G08 [LWNO]	1229	1302	+	Glu	TTC	[ENA]	○
	>W1711339097	MBTZ01000072	Bacillota	Lacticaseibacillus paracasei [MBTZ]	2243	2316	+	Glu	TTC	[ENA]	○
	>W1711339111	MBTZ01000075	Bacillota	Lacticaseibacillus paracasei [MBTZ]	1227	1300	+	Glu	TTC	[ENA]	○
	>W1711517951	MLKC01000013	Bacillota	Lacticaseibacillus rhamnosus [MLKC]	1655	1728	+	Glu	TTC	[ENA]	○
	>W1711517973	MLKC01000030	Bacillota	Lacticaseibacillus rhamnosus [MLKC]	245445	245518	+	Glu	TTC	[ENA]	○
	>W1711687580	MSCR01000015	Bacillota	Ligilactobacillus salivarius [MSCR]	1266	1340	+	Glu	TTC	[ENA]	○
	>W1711943854	NBEG01000011	Bacillota	Ligilactobacillus salivarius [NBEG]	1414	1488	+	Glu	TTC	[ENA]	○
	>W1711943868	NBEG01000017	Bacillota	Ligilactobacillus salivarius [NBEG]	36548	36473	-	Glu	TTC	[ENA]	○
	>W1711944218	NBEO01000005	Bacillota	Ligilactobacillus salivarius [NBEO]	1111	1186	+	Glu	TTC	[ENA]	○
	>W1711944247	NBEO01000024	Bacillota	Ligilactobacillus salivarius [NBEO]	23170	23095	-	Glu	TTC	[ENA]	○
	>W1711944250	NBEO01000045	Bacillota	Ligilactobacillus salivarius [NBEO]	5	79	+	Glu	TTC	[ENA]	○
	>W1711944522	NBEU01000012	Bacillota	Ligilactobacillus salivarius [NBEU]	15759	15684	-	Glu	TTC	[ENA]	○
	>C171056160	CP017065	Bacillota	Lacticaseibacillus casei LC5 [CP017065]	782940	783013	+	Glu	TTC	-	○
	>C171056195	CP017065	Bacillota	Lacticaseibacillus casei LC5 [CP017065]	1871194	1871121	-	Glu	TTC	-	○
	>C171113742	CP020858	Bacillota	Ligilactobacillus salivarius ZLS006 [CP020858]	16534	16609	+	Glu	TTC	-	○
	>C171113753	CP020858	Bacillota	Ligilactobacillus salivarius ZLS006 [CP020858]	431577	431652	+	Glu	TTC	-	○
	>C171113783	CP020858	Bacillota	Ligilactobacillus salivarius ZLS006 [CP020858]	1434407	1434332	-	Glu	TTC	-	○
	>C171113809	CP020858	Bacillota	Ligilactobacillus salivarius ZLS006 [CP020858]	1389398	1389324	-	Glu	TTC	-	○
	>C011452	CP000423	Bacillota	Lacticaseibacillus paracasei ATCC 334 [CP000423]	830144	830215	+	Glu	TTC	[Ensembl]	○
	>C011489	CP000423	Bacillota	Lacticaseibacillus paracasei ATCC 334 [CP000423]	1823202	1823131	-	Glu	TTC	[Ensembl]	○
	>W141004714	AFYQ01000037	Bacillota	Lacticaseibacillus paracasei UCD174 [AFYQ]	1578	1651	+	Glu	TTC	[ENA]	○
	>W141004738	AFYQ01000064	Bacillota	Lacticaseibacillus paracasei UCD174 [AFYQ]	44363	44290	-	Glu	TTC	[ENA]	○
	>WENV180128818	OATB01002379	[OATB] human gut metagenome; faeces		2263	2190	-	Glu	TTC	[ENA]	◯
	>WENV180438674	OBWS01000346	[OBWS] human gut metagenome; faeces		25229	25302	+	Glu	TTC	[ENA]	◯
	>WENV180439128	OBWS01007949	[OBWS] human gut metagenome; faeces		1405	1478	+	Glu	TTC	[ENA]	◯
	>WENV180493963	OBZZ01001160	[OBZZ] human gut metagenome; faeces		3927	4000	+	Glu	TTC	[ENA]	◯
	>WENV180494008	OBZZ01002220	[OBZZ] human gut metagenome; faeces		2449	2522	+	Glu	TTC	[ENA]	◯
	>WENV180494032	OBZZ01003277	[OBZZ] human gut metagenome; faeces		429	502	+	Glu	TTC	[ENA]	◯
	>WENV181236674	OFEZ01004829	[OFEZ] mouse gut metagenome; faeces		2183	2109	-	Glu	TTC	[ENA]	◯
	>WENV181240880	OFFE01013184	[OFFE] mouse gut metagenome; faeces		2183	2109	-	Glu	TTC	[ENA]	◯
	>WENV181262679	OFFY01015749	[OFFY] mouse gut metagenome; faeces		247	321	+	Glu	TTC	[ENA]	◯
	>WENV181993921	OHAS01006376	[OHAS] human gut metagenome; faeces		251	326	+	Glu	TTC	[ENA]	◯
	>W141207935	AZOE01000005	Bacillota	Lacticaseibacillus casei A2-362 [AZOE]	99923	99850	-	Glu	TTC	[ENA]	○
	>WENV182858616	OKOF01000247	[OKOF] human gut metagenome; human gut		2219	2292	+	Glu	TTC	[ENA]	◯
	>WENV183195722	OLPT01024798	[OLPT] human gut metagenome; faeces		429	355	-	Glu	TTC	[ENA]	◯
	>C181023003	CP017063	Bacillota	Lacticaseibacillus rhamnosus LR5 [CP017063]	765350	765423	+	Glu	TTC	-	○
	>C181023040	CP017063	Bacillota	Lacticaseibacillus rhamnosus LR5 [CP017063]	1797821	1797748	-	Glu	TTC	-	○
	>C191224672	LS991409	Bacillota	Lactobacillus delbrueckii subsp. lactis [LS991409]	865110	865183	+	Glu	TTC	-	○
	>C191224709	LS991409	Bacillota	Lactobacillus delbrueckii subsp. lactis [LS991409]	1697129	1697058	-	Glu	TTC	-	○
	>C191224722	LS991409	Bacillota	Lactobacillus delbrueckii subsp. lactis [LS991409]	1632477	1632404	-	Glu	TTC	-	○
	>C191224730	LS991409	Bacillota	Lactobacillus delbrueckii subsp. lactis [LS991409]	1581936	1581863	-	Glu	TTC	-	○
	>C191224736	LS991409	Bacillota	Lactobacillus delbrueckii subsp. lactis [LS991409]	1464874	1464803	-	Glu	TTC	-	○
	>W09123091	ACGS01000001	Bacillota	Ligilactobacillus ruminis ATCC 25644 [ACGS]	1246	1320	+	Glu	TTC	[ENA]	○
	>W09123105	ACGS01000024	Bacillota	Ligilactobacillus ruminis ATCC 25644 [ACGS]	6173	6101	-	Glu	TTC	[ENA]	○
	>W09123129	ACGS01000146	Bacillota	Ligilactobacillus ruminis ATCC 25644 [ACGS]	217	290	+	Glu	TTC	[ENA]	○
	>W1910500684	FXZN01000003	Bacillota	Lacticaseibacillus zeae casei [FXZN]	2438	2511	+	Glu	TTC	[ENA]	○
	>W1910500722	FXZN01000021	Bacillota	Lacticaseibacillus zeae casei [FXZN]	14110	14037	-	Glu	TTC	[ENA]	○
	>W1910643205	LUGP01000074	Bacillota	Ligilactobacillus agilis UMNLA2 [LUGP]	396	468	+	Glu	TTC	[ENA]	○
	>W1910643221	LUGP01000074	Bacillota	Ligilactobacillus agilis UMNLA2 [LUGP]	1897	1969	+	Glu	TTC	[ENA]	○
	>W1910643234	LUGP01000085	Bacillota	Ligilactobacillus agilis UMNLA2 [LUGP]	26478	26406	-	Glu	TTC	[ENA]	○
	>W1911422991	NXEW01000004	Bacillota	Lacticaseibacillus rhamnosus P4 [NXEW]	79402	79329	-	Glu	TTC	[ENA]	○
	>W1911423023	NXEW01000037	Bacillota	Lacticaseibacillus rhamnosus P4 [NXEW]	14152	14079	-	Glu	TTC	[ENA]	○
	>W1911587226	PJQV01000004	Bacillota	Lacticaseibacillus rhamnosus LR-S [PJQV]	2502	2429	-	Glu	TTC	[ENA]	○
	>W1911587244	PJQV01000010	Bacillota	Lacticaseibacillus rhamnosus LR-S [PJQV]	13759	13686	-	Glu	TTC	[ENA]	○
	>W1911631550	PUFG01000018	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	87	14	-	Glu	TTC	[ENA]	○
	>W1911631566	PUFG01000021	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	9536	9607	+	Glu	TTC	[ENA]	○
	>W1911631589	PUFG01000033	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	20610	20537	-	Glu	TTC	[ENA]	○
	>W1911631592	PUFG01000037	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	1	72	+	Glu	TTC	[ENA]	○
	>W1911631602	PUFG01000039	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	18284	18213	-	Glu	TTC	[ENA]	○
	>W1911631621	PUFG01000051	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	3589	3662	+	Glu	TTC	[ENA]	○
	>W1911631635	PUFG01000065	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	14219	14148	-	Glu	TTC	[ENA]	○
	>W1911631640	PUFG01000068	Bacillota	Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]	13783	13710	-	Glu	TTC	[ENA]	○
	>W1810445119	PZKI01000009	Bacillota	Lactobacillus delbrueckii AVK [PZKI]	33801	33874	+	Glu	TTC	[ENA]	○
	>W1810445130	PZKI01000016	Bacillota	Lactobacillus delbrueckii AVK [PZKI]	42436	42363	-	Glu	TTC	[ENA]	○
	>W1810445162	PZKI01000041	Bacillota	Lactobacillus delbrueckii AVK [PZKI]	617	688	+	Glu	TTC	[ENA]	○
	>W1810445169	PZKI01000044	Bacillota	Lactobacillus delbrueckii AVK [PZKI]	3807	3880	+	Glu	TTC	[ENA]	○
	>W1810472419	QAGU01000053	Bacillota	Ligilactobacillus salivarius DS2_12 [QAGU]	181	107	-	Glu	TTC	[ENA]	○
	>W1810489390	QAZZ01000014	Bacillota	Lactobacillus sp. DS18_6 [QAZZ]	2416	2489	+	Glu	TTC	[ENA]	○
	>W1810489414	QAZZ01000038	Bacillota	Lactobacillus sp. DS18_6 [QAZZ]	1320	1393	+	Glu	TTC	[ENA]	○
	>W1810760767	QPKO01000019	Bacillota	Bacillus anthracis Strain 32 [QPKO]	29744	29817	+	Glu	TTC	[ENA]	○
	>W1810838176	QSTB01000008	Bacillota	Ligilactobacillus salivarius OM08-20 [QSTB]	1395	1469	+	Glu	TTC	[ENA]	○
	>W1810838196	QSTB01000045	Bacillota	Ligilactobacillus salivarius OM08-20 [QSTB]	594	520	-	Glu	TTC	[ENA]	○
	>C151000791	AP012541	Bacillota	Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]	804174	804247	+	Glu	TTC	[Ensembl]	○
	>C151000830	AP012541	Bacillota	Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]	1876886	1876813	-	Glu	TTC	[Ensembl]	○
	>C151030934	CP007646	Bacillota	Ligilactobacillus salivarius JCM1046 [CP007646]	470369	470443	+	Glu	TTC	[Ensembl]	○
	>C151030945	CP007646	Bacillota	Ligilactobacillus salivarius JCM1046 [CP007646]	1822728	1822653	-	Glu	TTC	[Ensembl]	○
	>C151030956	CP007646	Bacillota	Ligilactobacillus salivarius JCM1046 [CP007646]	1413553	1413478	-	Glu	TTC	[Ensembl]	○
	>W1511685005	LFNA01000023	Bacillota	Lacticaseibacillus rhamnosus 40f [LFNA]	48530	48603	+	Glu	TTC	[ENA]	○
	>W1511685026	LFNA01000056	Bacillota	Lacticaseibacillus rhamnosus 40f [LFNA]	1023	950	-	Glu	TTC	[ENA]	○
	>C161079194	CP014899	Bacillota	Loigolactobacillus backii TMW 1.2002 [CP014899]	1153162	1153234	+	Glu	TTC	-	○
	>C161079236	CP014899	Bacillota	Loigolactobacillus backii TMW 1.2002 [CP014899]	2006096	2006023	-	Glu	TTC	-	○
	>W121045087	AICL01000001	Bacillota	Ligilactobacillus salivarius SMXD51 [AICL]	43889	43814	-	Glu	TTC	[ENA]	○
	>W121045113	AICL01000003	Bacillota	Ligilactobacillus salivarius SMXD51 [AICL]	623378	623453	+	Glu	TTC	[ENA]	○
	>W121045139	AICL01000003	Bacillota	Ligilactobacillus salivarius SMXD51 [AICL]	665414	665488	+	Glu	TTC	[ENA]	○
	>W121045153	AICL01000005	Bacillota	Ligilactobacillus salivarius SMXD51 [AICL]	278083	278008	-	Glu	TTC	[ENA]	○
	>W1610030996	AYYL01000074	Bacillota	Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [AYYL]	3225	3297	+	Glu	TTC	[ENA]	○
	>W1610031504	AYYW01000010	Bacillota	Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]	43382	43307	-	Glu	TTC	[ENA]	○
	>W1610031535	AYYW01000042	Bacillota	Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]	170	242	+	Glu	TTC	[ENA]	○
	>W1610033205	AZCT01000008	Bacillota	Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]	106128	106055	-	Glu	TTC	[ENA]	○
	>W1610033241	AZCT01000049	Bacillota	Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]	266	193	-	Glu	TTC	[ENA]	○
	>W1610037204	AZFW01000128	Bacillota	Schleiferilactobacillus harbinensis DSM 16991 [AZFW]	182	253	+	Glu	TTC	[ENA]	○
	>W1610037225	AZFW01000151	Bacillota	Schleiferilactobacillus harbinensis DSM 16991 [AZFW]	13792	13721	-	Glu	TTC	[ENA]	○
	>W1610037585	AZGD01000050	Bacillota	Ligilactobacillus hayakitensis DSM 18933 = JCM 14209 [AZGD]	1358	1431	+	Glu	TTC	[ENA]	○
	>W1610529315	JQBZ01000017	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	99	172	+	Glu	TTC	[ENA]	○
	>W1610529322	JQBZ01000025	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	809841	809768	-	Glu	TTC	[ENA]	○
	>W1610529349	JQBZ01000026	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	15402	15331	-	Glu	TTC	[ENA]	○
	>W1610543623	JTHX01000023	Bacillota	Lacticaseibacillus rhamnosus [JTHX]	44639	44712	+	Glu	TTC	[ENA]	○
	>W1610543648	JTHX01000033	Bacillota	Lacticaseibacillus rhamnosus [JTHX]	13601	13528	-	Glu	TTC	[ENA]	○
	>W1610543780	JTIA01000200	Bacillota	Lacticaseibacillus rhamnosus [JTIA]	372	445	+	Glu	TTC	[ENA]	○
	>W1610543783	JTIA01000262	Bacillota	Lacticaseibacillus rhamnosus [JTIA]	1445	1372	-	Glu	TTC	[ENA]	○
	>W1610544278	JTIK01000280	Bacillota	Lacticaseibacillus rhamnosus [JTIK]	19908	19981	+	Glu	TTC	[ENA]	○
	>W1610544292	JTIK01000345	Bacillota	Lacticaseibacillus rhamnosus [JTIK]	372	445	+	Glu	TTC	[ENA]	○
	>W1610547397	JUIQ01000358	Bacillota	Lacticaseibacillus rhamnosus [JUIQ]	447	520	+	Glu	TTC	[ENA]	○
	>W1610932256	LUHM01000005	Bacillota	Lactiplantibacillus paraplantarum [LUHM]	313448	313521	+	Glu	TTC	[ENA]	○
	>W1710027948	AYYL01000074	Bacillota	Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [AYYL]	3225	3297	+	Glu	TTC	[ENA]	○
	>W1710028431	AYYW01000010	Bacillota	Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]	43382	43307	-	Glu	TTC	[ENA]	○
	>W1710028462	AYYW01000042	Bacillota	Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]	170	242	+	Glu	TTC	[ENA]	○
	>W1710030477	AZCT01000008	Bacillota	Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]	106128	106055	-	Glu	TTC	[ENA]	○
	>W1710030513	AZCT01000049	Bacillota	Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]	266	193	-	Glu	TTC	[ENA]	○
	>W1710034243	AZFW01000128	Bacillota	Schleiferilactobacillus harbinensis DSM 16991 [AZFW]	182	253	+	Glu	TTC	[ENA]	○
	>W1710034264	AZFW01000151	Bacillota	Schleiferilactobacillus harbinensis DSM 16991 [AZFW]	13792	13721	-	Glu	TTC	[ENA]	○
	>W1710034624	AZGD01000050	Bacillota	Ligilactobacillus hayakitensis DSM 18933 = JCM 14209 [AZGD]	1358	1431	+	Glu	TTC	[ENA]	○
	>W1710082953	BDIT01000036	Bacillota	Lacticaseibacillus paracasei [BDIT]	67810	67737	-	Glu	TTC	[ENA]	○
	>W1710082968	BDIT01000051	Bacillota	Lacticaseibacillus paracasei [BDIT]	1193	1266	+	Glu	TTC	[ENA]	○
	>W1710630905	JQBZ01000017	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	99	172	+	Glu	TTC	[ENA]	○
	>W1710630912	JQBZ01000025	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	809841	809768	-	Glu	TTC	[ENA]	○
	>W1710630939	JQBZ01000026	Bacillota	Ligilactobacillus ceti DSM 22408 [JQBZ]	15402	15331	-	Glu	TTC	[ENA]	○
	>W1710646754	JTHX01000023	Bacillota	Lacticaseibacillus rhamnosus [JTHX]	44639	44712	+	Glu	TTC	[ENA]	○
	>W1710646779	JTHX01000033	Bacillota	Lacticaseibacillus rhamnosus [JTHX]	13601	13528	-	Glu	TTC	[ENA]	○
	>W1710646911	JTIA01000200	Bacillota	Lacticaseibacillus rhamnosus [JTIA]	372	445	+	Glu	TTC	[ENA]	○
	>W1710646914	JTIA01000262	Bacillota	Lacticaseibacillus rhamnosus [JTIA]	1445	1372	-	Glu	TTC	[ENA]	○
	>W1710647409	JTIK01000280	Bacillota	Lacticaseibacillus rhamnosus [JTIK]	19908	19981	+	Glu	TTC	[ENA]	○
	>W1710647423	JTIK01000345	Bacillota	Lacticaseibacillus rhamnosus [JTIK]	372	445	+	Glu	TTC	[ENA]	○
	>W1710650580	JUIQ01000358	Bacillota	Lacticaseibacillus rhamnosus [JUIQ]	447	520	+	Glu	TTC	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK