This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.388909 (26 seq.)
>WENV180315966
OBKI01001333
[OBKI] human gut metagenome; human gut
168
96
-
Cys
GCA
[ENA]
¢þ
>WENV180523127
OCHG01008138
[OCHG] human gut metagenome; human gut
2212
2284
+
Cys
GCA
[ENA]
¢þ
>WENV180643063
OCRP01003310
[OCRP] human gut metagenome; human gut
4692
4620
-
Cys
GCA
[ENA]
¢þ
>WENV181149212
OEHT01035125
[OEHT] human metagenome; G_DNA_Stool
38
110
+
Cys
GCA
[ENA]
¢þ
>WENV181473367
OGFB01002026
[OGFB] metagenome; Human gut stool
774
702
-
Cys
GCA
[ENA]
¢þ
>WENV181911569
OGYD01002262
[OGYD] human gut metagenome; faeces
67
139
+
Cys
GCA
[ENA]
¢þ
>WENV181932666
OGYR01003996
[OGYR] human gut metagenome; faeces
67
139
+
Cys
GCA
[ENA]
¢þ
>WENV181940267
OGYX01033906
[OGYX] human gut metagenome; faeces
644
716
+
Cys
GCA
[ENA]
¢þ
>WENV182020063
OHBZ01011701
[OHBZ] human gut metagenome; feces
46
118
+
Cys
GCA
[ENA]
¢þ
>WENV182234521
OHRR01015716
[OHRR] human gut metagenome; feces
8
80
+
Cys
GCA
[ENA]
¢þ
>WENV182243169
OHSH01037926
[OHSH] human gut metagenome; feces
76
148
+
Cys
GCA
[ENA]
¢þ
>WENV182271145
OHUF01002741
[OHUF] human gut metagenome; feces
690
618
-
Cys
GCA
[ENA]
¢þ
>WENV182300423
OHWM01003857
[OHWM] human gut metagenome; feces
2296
2368
+
Cys
GCA
[ENA]
¢þ
>WENV182427639
OIHW01001154
[OIHW] human gut metagenome; human gut
681
753
+
Cys
GCA
[ENA]
¢þ
>WENV182462105
OINX01003099
[OINX] human gut metagenome; human gut
767
839
+
Cys
GCA
[ENA]
¢þ
>WENV182682833
OJNW01015139
[OJNW] human gut metagenome; human gut
57
129
+
Cys
GCA
[ENA]
¢þ
>WENV183017237
OLEU01005760
[OLEU] human gut metagenome; human gut
781
709
-
Cys
GCA
[ENA]
¢þ
>WENV183021829
OLFM01011981
[OLFM] human gut metagenome; human gut
59
131
+
Cys
GCA
[ENA]
¢þ
>WENV183169621
OLPA01006043
[OLPA] human gut metagenome; faeces
6204
6276
+
Cys
GCA
[ENA]
¢þ
>WENV183185226
OLPN01004571
[OLPN] human gut metagenome; faeces
6387
6315
-
Cys
GCA
[ENA]
¢þ
>WENV183208550
OLQB01001937
[OLQB] human gut metagenome; faeces
74
2
-
Cys
GCA
[ENA]
¢þ
>WENV183242562
OLRC01000299
[OLRC] human gut metagenome; faeces
35524
35452
-
Cys
GCA
[ENA]
¢þ
>WENV183340585
OLWL01018469
[OLWL] human gut metagenome; feces
634
562
-
Cys
GCA
[ENA]
¢þ
>WENV183446414
OMCQ01028742
[OMCQ] human gut metagenome; feces
37
109
+
Cys
GCA
[ENA]
¢þ
>WENV183550873
OOBI01000152
[OOBI] human gut metagenome; human gut
14639
14567
-
Cys
GCA
[ENA]
¢þ
>W141732900
JNKK01000020
Bacillota
Lachnospiraceae bacterium FE2018 [JNKK]
38399
38327
-
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK