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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.399041 (298 seq.)
>W1711170078
LWAE01000001
Bacillota
Clostridium magnum DSM 2767 [LWAE]
352824
352898
+
Trp
CCA
[ENA]
¡û
>W1711294082
LZZC01000052
Bacillota
Clostridium beijerinckii [LZZC]
35526
35452
-
Trp
CCA
[ENA]
¡û
>W1711294083
LZZC01000052
Bacillota
Clostridium beijerinckii [LZZC]
33444
33370
-
Trp
CCA
[ENA]
¡û
>W1711294108
LZZD01000009
Bacillota
Clostridium beijerinckii [LZZD]
72565
72491
-
Trp
CCA
[ENA]
¡û
>W1711294109
LZZD01000009
Bacillota
Clostridium beijerinckii [LZZD]
70484
70410
-
Trp
CCA
[ENA]
¡û
>W1711294156
LZZE01000009
Bacillota
Clostridium beijerinckii [LZZE]
77802
77728
-
Trp
CCA
[ENA]
¡û
>W1711294157
LZZE01000009
Bacillota
Clostridium beijerinckii [LZZE]
75721
75647
-
Trp
CCA
[ENA]
¡û
>W1711294235
LZZG01000018
Bacillota
Clostridium beijerinckii [LZZG]
71499
71425
-
Trp
CCA
[ENA]
¡û
>W1711294236
LZZG01000018
Bacillota
Clostridium beijerinckii [LZZG]
69418
69344
-
Trp
CCA
[ENA]
¡û
>W1711294317
LZZI01000046
Bacillota
Clostridium beijerinckii [LZZI]
23765
23839
+
Trp
CCA
[ENA]
¡û
>W1711294318
LZZI01000046
Bacillota
Clostridium beijerinckii [LZZI]
25848
25922
+
Trp
CCA
[ENA]
¡û
>W1711294357
LZZJ01000012
Bacillota
Clostridium beijerinckii [LZZJ]
13869
13943
+
Trp
CCA
[ENA]
¡û
>W1711294358
LZZJ01000012
Bacillota
Clostridium beijerinckii [LZZJ]
15948
16022
+
Trp
CCA
[ENA]
¡û
>W1711294477
LZZK01000075
Bacillota
Clostridium beijerinckii [LZZK]
2419
2345
-
Trp
CCA
[ENA]
¡û
>W1711294478
LZZK01000075
Bacillota
Clostridium beijerinckii [LZZK]
340
266
-
Trp
CCA
[ENA]
¡û
>W1711294504
LZZL01000095
Bacillota
Clostridium sp. BL-8 [LZZL]
5143
5217
+
Trp
CCA
[ENA]
¡û
>W1711308448
MAPZ01000019
Bacillota
Clostridium paraputrificum [MAPZ]
546895
546821
-
Trp
CCA
[ENA]
¡û
>W1711308449
MAPZ01000019
Bacillota
Clostridium paraputrificum [MAPZ]
500973
500899
-
Trp
CCA
[ENA]
¡û
>W1711320424
MBAF01000002
Bacillota
Clostridium beijerinckii [MBAF]
108735
108809
+
Trp
CCA
[ENA]
¡û
>W1711320425
MBAF01000002
Bacillota
Clostridium beijerinckii [MBAF]
110816
110890
+
Trp
CCA
[ENA]
¡û
>W1711579496
MNRT01000043
Bacillota
Clostridium sp. 29_15 [MNRT]
100306
100232
-
Trp
CCA
[ENA]
¡û
>W1711579497
MNRT01000043
Bacillota
Clostridium sp. 29_15 [MNRT]
96362
96288
-
Trp
CCA
[ENA]
¡û
>W131092140
AOIF01000145
Bacillota
Clostridium saccharoperbutylacetonicum N1-4(HMT) [AOIF]
10781
10707
-
Trp
CCA
[ENA]
¡û
>W131232774
AUJN01000003
Bacillota
Clostridium butyricum AGR2140 [AUJN]
24222
24296
+
Trp
CCA
[ENA]
¡û
>W131232775
AUJN01000003
Bacillota
Clostridium butyricum AGR2140 [AUJN]
29866
29940
+
Trp
CCA
[ENA]
¡û
>W1711791646
MWJB01000058
Bacillota
Clostridium botulinum [MWJB]
21566
21640
+
Trp
CCA
[ENA]
¡û
>W1711794352
MWMH01000004
Bacillota
Clostridium beijerinckii [MWMH]
106147
106221
+
Trp
CCA
[ENA]
¡û
>W1711794353
MWMH01000004
Bacillota
Clostridium beijerinckii [MWMH]
150475
150549
+
Trp
CCA
[ENA]
¡û
>W1711902879
MZGT01000026
Bacillota
Clostridium chromiireducens [MZGT]
70254
70180
-
Trp
CCA
[ENA]
¡û
>W1711902880
MZGT01000026
Bacillota
Clostridium chromiireducens [MZGT]
34456
34382
-
Trp
CCA
[ENA]
¡û
>W1712096539
NHZR01000002
Bacillota
Clostridium diolis [NHZR]
223730
223656
-
Trp
CCA
[ENA]
¡û
>W1712096540
NHZR01000002
Bacillota
Clostridium diolis [NHZR]
221648
221574
-
Trp
CCA
[ENA]
¡û
>C171019499
CP013018
Bacillota
Clostridium pasteurianum DSM 525 = ATCC 6013 [CP013018]
3769283
3769209
-
Trp
CCA
-
¡û
>C171019578
CP013019
Bacillota
Clostridium pasteurianum M150B [CP013019]
3768294
3768220
-
Trp
CCA
-
¡û
>C171045680
CP016087
Bacillota
Clostridium saccharoperbutylacetonicum N1-504 [CP016087]
797366
797440
+
Trp
CCA
-
¡û
>C171045681
CP016087
Bacillota
Clostridium saccharoperbutylacetonicum N1-504 [CP016087]
805580
805654
+
Trp
CCA
-
¡û
>C171045841
CP016090
Bacillota
Clostridium beijerinckii BAS/B3/I/124 [CP016090]
516239
516313
+
Trp
CCA
-
¡û
>C171045842
CP016090
Bacillota
Clostridium beijerinckii BAS/B3/I/124 [CP016090]
518320
518394
+
Trp
CCA
-
¡û
>W131082815
ANZB01000008
Bacillota
Clostridium pasteurianum DSM 525 [ANZB]
131015
131089
+
Trp
CCA
[ENA]
¡û
>W131092141
AOIF01000145
Bacillota
Clostridium saccharoperbutylacetonicum N1-4(HMT) [AOIF]
2580
2506
-
Trp
CCA
[ENA]
¡û
>W131156859
AQQG01000063
Bacillota
Clostridium diolis DSM 15410 [AQQG]
131004
130930
-
Trp
CCA
[ENA]
¡û
>W131156903
AQQG01000160
Bacillota
Clostridium diolis DSM 15410 [AQQG]
5397
5323
-
Trp
CCA
[ENA]
¡û
>W131232254
AUJC01000001
Bacillota
Clostridium paraputrificum AGR2156 [AUJC]
333715
333641
-
Trp
CCA
[ENA]
¡û
>C005086
CP000721
Bacillota
Clostridium beijerinckii NCIMB 8052 [CP000721]
568733
568807
+
Trp
CCA
[Ensembl]
¡û
>C005087
CP000721
Bacillota
Clostridium beijerinckii NCIMB 8052 [CP000721]
570814
570888
+
Trp
CCA
[Ensembl]
¡û
>w011486
AALO01000020
Bacillota
Clostridium beijerinckii NCIMB 8052 [AALO]
80336
80412
+
Trp
CCA
[ENA]
¡û
>w011485
AALO01000020
Bacillota
Clostridium beijerinckii NCIMB 8052 [AALO]
78255
78331
+
Trp
CCA
[ENA]
¡û
>WENV180121452
OASR01004521
[OASR] human gut metagenome; faeces
372
298
-
Trp
CCA
[ENA]
¢þ
>WENV180124207
OASX01003625
[OASX] human gut metagenome; faeces
1512
1586
+
Trp
CCA
[ENA]
¢þ
>WENV180129345
OATC01001259
[OATC] human gut metagenome; faeces
3008
2934
-
Trp
CCA
[ENA]
¢þ
>WENV180140279
OATT01027198
[OATT] human gut metagenome; faeces
193
119
-
Trp
CCA
[ENA]
¢þ
>WENV180153127
OAUR01001623
[OAUR] human gut metagenome; faeces
93
167
+
Trp
CCA
[ENA]
¢þ
>WENV180191338
OAXB01024439
[OAXB] human gut metagenome; faeces
214
140
-
Trp
CCA
[ENA]
¢þ
>WENV180231947
OBCO01000040
[OBCO] synthetic metagenome; purchased from BEI Resources HM-276D
223210
223136
-
Trp
CCA
[ENA]
¢þ
>WENV180231948
OBCO01000040
[OBCO] synthetic metagenome; purchased from BEI Resources HM-276D
221129
221055
-
Trp
CCA
[ENA]
¢þ
>WENV180233073
OBCP01000107
[OBCP] synthetic metagenome; purchased from BEI Resources HM-276D
71305
71231
-
Trp
CCA
[ENA]
¢þ
>WENV180233074
OBCP01000107
[OBCP] synthetic metagenome; purchased from BEI Resources HM-276D
69224
69150
-
Trp
CCA
[ENA]
¢þ
>WENV180324261
OBKR01226707
[OBKR] human gut metagenome; feces
119
45
-
Trp
CCA
[ENA]
¢þ
>WENV180337537
OBLG01053894
[OBLG] human gut metagenome; human gut
816
742
-
Trp
CCA
[ENA]
¢þ
>WENV180341953
OBLI01305711
[OBLI] pig gut metagenome; faeces
160
86
-
Trp
CCA
[ENA]
¢þ
>W141039532
ALXI01000096
Bacillota
Clostridium sp. Maddingley MBC34-26 [ALXI]
24821
24895
+
Trp
CCA
[ENA]
¡û
>W141039533
ALXI01000096
Bacillota
Clostridium sp. Maddingley MBC34-26 [ALXI]
66750
66824
+
Trp
CCA
[ENA]
¡û
>WENV180444445
OBWZ01011429
[OBWZ] human gut metagenome; faeces
207
281
+
Trp
CCA
[ENA]
¢þ
>WENV180445949
OBXA01054294
[OBXA] human gut metagenome; faeces
159
233
+
Trp
CCA
[ENA]
¢þ
>W141042988
AMEZ01000134
Bacillota
Clostridium celatum DSM 1785 [AMEZ]
2562
2488
-
Trp
CCA
[ENA]
¡û
>WENV180450499
OBXH01040824
[OBXH] human gut metagenome; faeces
167
93
-
Trp
CCA
[ENA]
¢þ
>WENV180486208
OBZL01000028
[OBZL] human gut metagenome; faeces
64475
64401
-
Trp
CCA
[ENA]
¢þ
>WENV180486257
OBZL01000090
[OBZL] human gut metagenome; faeces
2415
2489
+
Trp
CCA
[ENA]
¢þ
>WENV180494541
OCAA01000434
[OCAA] human gut metagenome; faeces
36095
36021
-
Trp
CCA
[ENA]
¢þ
>WENV180505060
OCAO01001267
[OCAO] human gut metagenome; faeces
1119
1193
+
Trp
CCA
[ENA]
¢þ
>WENV180506720
OCAS01004314
[OCAS] human gut metagenome; faeces
2995
2921
-
Trp
CCA
[ENA]
¢þ
>WENV180528873
OCHJ01033320
[OCHJ] human gut metagenome; human gut
636
710
+
Trp
CCA
[ENA]
¢þ
>WENV180569460
OCLR01000084
[OCLR] synthetic metagenome; purchased from BEI Resources HM-276D
71215
71141
-
Trp
CCA
[ENA]
¢þ
>WENV180569461
OCLR01000084
[OCLR] synthetic metagenome; purchased from BEI Resources HM-276D
69134
69060
-
Trp
CCA
[ENA]
¢þ
>WENV180570393
OCLS01000080
[OCLS] synthetic metagenome; purchased from BEI Resources HM-276D
71215
71141
-
Trp
CCA
[ENA]
¢þ
>WENV180570394
OCLS01000080
[OCLS] synthetic metagenome; purchased from BEI Resources HM-276D
69134
69060
-
Trp
CCA
[ENA]
¢þ
>WENV180571427
OCLT01000099
[OCLT] synthetic metagenome; purchased from BEI Resources HM-276D
71305
71231
-
Trp
CCA
[ENA]
¢þ
>WENV180571428
OCLT01000099
[OCLT] synthetic metagenome; purchased from BEI Resources HM-276D
69224
69150
-
Trp
CCA
[ENA]
¢þ
>WENV180573672
OCLW01000099
[OCLW] synthetic metagenome; purchased from BEI Resources HM-276D
71305
71231
-
Trp
CCA
[ENA]
¢þ
>WENV180573673
OCLW01000099
[OCLW] synthetic metagenome; purchased from BEI Resources HM-276D
69224
69150
-
Trp
CCA
[ENA]
¢þ
>WENV180599766
OCPP01004891
[OCPP] human gut metagenome; faeces
391
317
-
Trp
CCA
[ENA]
¢þ
>WENV180606729
OCPT01113206
[OCPT] human gut metagenome; human gut
71
-1
-
Trp
CCA
[ENA]
¢þ
>WENV180621707
OCQC01004154
[OCQC] human gut metagenome; human gut
3090
3164
+
Trp
CCA
[ENA]
¢þ
>WENV180639664
OCRL01000060
[OCRL] synthetic metagenome; purchased from BEI Resources HM-276D
223210
223136
-
Trp
CCA
[ENA]
¢þ
>WENV180639665
OCRL01000060
[OCRL] synthetic metagenome; purchased from BEI Resources HM-276D
221129
221055
-
Trp
CCA
[ENA]
¢þ
>WENV180640765
OCRM01000160
[OCRM] synthetic metagenome; purchased from BEI Resources HM-276D
71305
71231
-
Trp
CCA
[ENA]
¢þ
>WENV180640766
OCRM01000160
[OCRM] synthetic metagenome; purchased from BEI Resources HM-276D
69224
69150
-
Trp
CCA
[ENA]
¢þ
>W141063533
APJA01000006
Bacillota
Clostridium intestinale URNW [APJA]
104838
104912
+
Trp
CCA
[ENA]
¡û
>W141083109
AUPH01000245
Bacillota
Clostridium beijerinckii AAU1 [AUPH]
591
517
-
Trp
CCA
[ENA]
¡û
>W141083162
AUPH01003603
Bacillota
Clostridium beijerinckii AAU1 [AUPH]
160
234
+
Trp
CCA
[ENA]
¡û
>WENV181420757
OGCN01005456
[OGCN] human gut metagenome; human gut
9707
9633
-
Trp
CCA
[ENA]
¢þ
>WENV181470991
OGEU01041266
[OGEU] metagenome; Human gut stool
225
151
-
Trp
CCA
[ENA]
¢þ
>WENV181553117
OGIQ01002889
[OGIQ] metagenome; Human gut stool
237
163
-
Trp
CCA
[ENA]
¢þ
>WENV181555902
OGIU01000670
[OGIU] metagenome; Human gut stool
6054
6128
+
Trp
CCA
[ENA]
¢þ
>WENV181555903
OGIU01000670
[OGIU] metagenome; Human gut stool
10005
10079
+
Trp
CCA
[ENA]
¢þ
>WENV181558343
OGIX01000316
[OGIX] metagenome; Human gut stool
26795
26721
-
Trp
CCA
[ENA]
¢þ
>WENV181643053
OGNH01015060
[OGNH] metagenome; Human gut stool
722
648
-
Trp
CCA
[ENA]
¢þ
>WENV181707712
OGPL01065887
[OGPL] human gut metagenome; faeces
196
122
-
Trp
CCA
[ENA]
¢þ
>WENV181776729
OGRG01006679
[OGRG] human gut metagenome; faeces
3822
3896
+
Trp
CCA
[ENA]
¢þ
>WENV181798757
OGRX01000119
[OGRX] human gut metagenome; fecal sample 2 from infant 8
43591
43517
-
Trp
CCA
[ENA]
¢þ
>WENV181798824
OGRX01000387
[OGRX] human gut metagenome; fecal sample 2 from infant 8
16309
16235
-
Trp
CCA
[ENA]
¢þ
>WENV181801784
OGSC01000074
[OGSC] human gut metagenome; fecal sample 8 from infant 5
45923
45849
-
Trp
CCA
[ENA]
¢þ
>WENV181804278
OGSF01000019
[OGSF] human gut metagenome; fecal sample 3 from infant 5
89063
88989
-
Trp
CCA
[ENA]
¢þ
>WENV181804279
OGSF01000019
[OGSF] human gut metagenome; fecal sample 3 from infant 5
43048
42974
-
Trp
CCA
[ENA]
¢þ
>WENV181804939
OGSH01000075
[OGSH] human gut metagenome; fecal sample 5 from infant 6
48294
48220
-
Trp
CCA
[ENA]
¢þ
>WENV181805074
OGSH01000511
[OGSH] human gut metagenome; fecal sample 5 from infant 6
16358
16284
-
Trp
CCA
[ENA]
¢þ
>WENV181805296
OGSI01000030
[OGSI] human gut metagenome; fecal sample 4 from infant 8
105737
105663
-
Trp
CCA
[ENA]
¢þ
>WENV181805385
OGSI01000278
[OGSI] human gut metagenome; fecal sample 4 from infant 8
21460
21386
-
Trp
CCA
[ENA]
¢þ
>WENV181805578
OGSJ01000052
[OGSJ] human gut metagenome; fecal sample 6 from infant 6
58414
58488
+
Trp
CCA
[ENA]
¢þ
>WENV181805579
OGSJ01000052
[OGSJ] human gut metagenome; fecal sample 6 from infant 6
109140
109214
+
Trp
CCA
[ENA]
¢þ
>WENV181806118
OGSK01000024
[OGSK] human gut metagenome; fecal sample 2 from infant 5
62324
62250
-
Trp
CCA
[ENA]
¢þ
>WENV181806119
OGSK01000024
[OGSK] human gut metagenome; fecal sample 2 from infant 5
16309
16235
-
Trp
CCA
[ENA]
¢þ
>WENV181807274
OGSO01000055
[OGSO] human gut metagenome; fecal sample 3 from infant 6
78623
78697
+
Trp
CCA
[ENA]
¢þ
>WENV181807331
OGSO01000123
[OGSO] human gut metagenome; fecal sample 3 from infant 6
16343
16269
-
Trp
CCA
[ENA]
¢þ
>WENV181808224
OGSR01000251
[OGSR] human gut metagenome; fecal sample 8 from infant 2
79
5
-
Trp
CCA
[ENA]
¢þ
>WENV181809329
OGST01000008
[OGST] human gut metagenome; fecal sample 7 from infant 6
26243
26317
+
Trp
CCA
[ENA]
¢þ
>WENV181809588
OGST01000578
[OGST] human gut metagenome; fecal sample 7 from infant 6
17069
16995
-
Trp
CCA
[ENA]
¢þ
>WENV181809613
OGST01000699
[OGST] human gut metagenome; fecal sample 7 from infant 6
12354
12280
-
Trp
CCA
[ENA]
¢þ
>WENV181809867
OGSU01000028
[OGSU] human gut metagenome; fecal sample 7 from infant 5
76740
76814
+
Trp
CCA
[ENA]
¢þ
>WENV181809868
OGSU01000028
[OGSU] human gut metagenome; fecal sample 7 from infant 5
122661
122735
+
Trp
CCA
[ENA]
¢þ
>WENV181810944
OGSX01000081
[OGSX] human gut metagenome; fecal sample 1 from infant 8
7
81
+
Trp
CCA
[ENA]
¢þ
>WENV181811064
OGSX01004950
[OGSX] human gut metagenome; fecal sample 1 from infant 8
7
81
+
Trp
CCA
[ENA]
¢þ
>WENV181811188
OGSY01000151
[OGSY] human gut metagenome; fecal sample 5 from infant 8
79
5
-
Trp
CCA
[ENA]
¢þ
>WENV181811567
OGSZ01000001
[OGSZ] human gut metagenome; fecal sample 3 from infant 8
293270
293196
-
Trp
CCA
[ENA]
¢þ
>WENV181811568
OGSZ01000001
[OGSZ] human gut metagenome; fecal sample 3 from infant 8
287628
287554
-
Trp
CCA
[ENA]
¢þ
>WENV181811793
OGSZ01003816
[OGSZ] human gut metagenome; fecal sample 3 from infant 8
1285
1211
-
Trp
CCA
[ENA]
¢þ
>WENV181814578
OGTH01000008
[OGTH] human gut metagenome; fecal sample 4 from infant 6
172336
172410
+
Trp
CCA
[ENA]
¢þ
>WENV181814579
OGTH01000008
[OGTH] human gut metagenome; fecal sample 4 from infant 6
223062
223136
+
Trp
CCA
[ENA]
¢þ
>WENV181821187
OGUE01000031
[OGUE] human gut metagenome; fecal sample 1 from infant 5
62365
62291
-
Trp
CCA
[ENA]
¢þ
>WENV181821188
OGUE01000031
[OGUE] human gut metagenome; fecal sample 1 from infant 5
16350
16276
-
Trp
CCA
[ENA]
¢þ
>WENV181834568
OGUR01002727
[OGUR] metagenome; Human gut stool
4061
3987
-
Trp
CCA
[ENA]
¢þ
>WENV181981787
OHAG01006766
[OHAG] human gut metagenome; faeces
4088
4162
+
Trp
CCA
[ENA]
¢þ
>W141200267
AYXR01000016
Bacillota
Clostridium beijerinckii NRRL B-598 [AYXR]
105340
105414
+
Trp
CCA
[ENA]
¡û
>W141200268
AYXR01000016
Bacillota
Clostridium beijerinckii NRRL B-598 [AYXR]
107421
107495
+
Trp
CCA
[ENA]
¡û
>WENV182108941
OHIM01005584
[OHIM] human gut metagenome; feces
1641
1567
-
Trp
CCA
[ENA]
¢þ
>WENV182132775
OHKF01000994
[OHKF] human gut metagenome; feces
13178
13104
-
Trp
CCA
[ENA]
¢þ
>W141212225
AZQP01000003
Bacillota
Fervidicella metallireducens AeB [AZQP]
116024
116098
+
Trp
CCA
[ENA]
¡û
>WENV182159109
OHMA01000753
[OHMA] human gut metagenome; feces
13622
13548
-
Trp
CCA
[ENA]
¢þ
>WENV182407510
OIFD01000062
[OIFD] human gut metagenome; stool
76732
76806
+
Trp
CCA
[ENA]
¢þ
>WENV182407548
OIFD01000100
[OIFD] human gut metagenome; stool
15254
15180
-
Trp
CCA
[ENA]
¢þ
>WENV182409542
OIFJ01000011
[OIFJ] human gut metagenome; stool
49687
49761
+
Trp
CCA
[ENA]
¢þ
>WENV182409700
OIFJ01000124
[OIFJ] human gut metagenome; stool
5918
5844
-
Trp
CCA
[ENA]
¢þ
>WENV182410108
OIFK01000076
[OIFK] human gut metagenome; stool
9584
9510
-
Trp
CCA
[ENA]
¢þ
>WENV182410113
OIFK01000088
[OIFK] human gut metagenome; stool
33661
33587
-
Trp
CCA
[ENA]
¢þ
>WENV182410751
OIFM01000007
[OIFM] human gut metagenome; stool
109655
109581
-
Trp
CCA
[ENA]
¢þ
>WENV182410761
OIFM01000020
[OIFM] human gut metagenome; stool
15265
15191
-
Trp
CCA
[ENA]
¢þ
>WENV182411761
OIFQ01000039
[OIFQ] human gut metagenome; stool
76732
76806
+
Trp
CCA
[ENA]
¢þ
>WENV182411785
OIFQ01000062
[OIFQ] human gut metagenome; stool
51660
51734
+
Trp
CCA
[ENA]
¢þ
>WENV182602068
OJJJ01006710
[OJJJ] metagenome; faeces
1099
1173
+
Trp
CCA
[ENA]
¢þ
>WENV182617415
OJKD01005822
[OJKD] metagenome; faeces
933
859
-
Trp
CCA
[ENA]
¢þ
>WENV182656686
OJMJ01037737
[OJMJ] human gut metagenome; feces
698
624
-
Trp
CCA
[ENA]
¢þ
>W141265594
CCFI01000018
Bacillota
Clostridium jeddahitimonense CL-2 [CCFI]
90702
90776
+
Trp
CCA
[ENA]
¡û
>W141267573
CCNP01000018
Bacillota
Clostridium jeddahitimonense CL-2 [CCNP]
90702
90776
+
Trp
CCA
[ENA]
¡û
>WENV182804880
OJUX01006433
[OJUX] human gut metagenome; human gut
1142
1068
-
Trp
CCA
[ENA]
¢þ
>WENV182807433
OJVW01002427
[OJVW] human gut metagenome; human gut
290
364
+
Trp
CCA
[ENA]
¢þ
>WENV182808782
OJWI01005419
[OJWI] human gut metagenome; human gut
59
133
+
Trp
CCA
[ENA]
¢þ
>WENV182809324
OJWO01002973
[OJWO] human gut metagenome; human gut
208
282
+
Trp
CCA
[ENA]
¢þ
>WENV182827631
OKDB01001035
[OKDB] human gut metagenome; human gut
947
873
-
Trp
CCA
[ENA]
¢þ
>WENV182832960
OKEP01003061
[OKEP] human gut metagenome; human gut
1083
1009
-
Trp
CCA
[ENA]
¢þ
>WENV182838542
OKGS01005702
[OKGS] human gut metagenome; human gut
1058
984
-
Trp
CCA
[ENA]
¢þ
>WENV182840173
OKHK01000421
[OKHK] human gut metagenome; human gut
5822
5748
-
Trp
CCA
[ENA]
¢þ
>WENV182844342
OKIR01002233
[OKIR] human gut metagenome; human gut
2049
2123
+
Trp
CCA
[ENA]
¢þ
>WENV182855777
OKNE01000615
[OKNE] human gut metagenome; human gut
1008
934
-
Trp
CCA
[ENA]
¢þ
>WENV182856608
OKNP01000150
[OKNP] human gut metagenome; human gut
7186
7112
-
Trp
CCA
[ENA]
¢þ
>WENV182857756
OKNY01002857
[OKNY] human gut metagenome; human gut
1378
1304
-
Trp
CCA
[ENA]
¢þ
>WENV182858020
OKOB01004634
[OKOB] human gut metagenome; human gut
93
167
+
Trp
CCA
[ENA]
¢þ
>WENV182862843
OKPP01007078
[OKPP] human gut metagenome; human gut
228
302
+
Trp
CCA
[ENA]
¢þ
>WENV182863548
OKPT01003897
[OKPT] human gut metagenome; human gut
184
258
+
Trp
CCA
[ENA]
¢þ
>WENV182863753
OKPU01003017
[OKPU] human gut metagenome; human gut
956
882
-
Trp
CCA
[ENA]
¢þ
>WENV182865044
OKQH01000717
[OKQH] human gut metagenome; human gut
347
273
-
Trp
CCA
[ENA]
¢þ
>WENV182865601
OKQK01001809
[OKQK] human gut metagenome; human gut
267
341
+
Trp
CCA
[ENA]
¢þ
>WENV182874601
OKRW01017311
[OKRW] human gut metagenome; faeces
586
660
+
Trp
CCA
[ENA]
¢þ
>WENV182954878
OKWB01000063
[OKWB] human gut metagenome; stool
7854
7780
-
Trp
CCA
[ENA]
¢þ
>WENV182954882
OKWB01000071
[OKWB] human gut metagenome; stool
52553
52627
+
Trp
CCA
[ENA]
¢þ
>WENV182958849
OKWI01000012
[OKWI] human gut metagenome; stool
237229
237155
-
Trp
CCA
[ENA]
¢þ
>WENV182958926
OKWI01000067
[OKWI] human gut metagenome; stool
15265
15191
-
Trp
CCA
[ENA]
¢þ
>WENV182961080
OKWK01000145
[OKWK] human gut metagenome; stool
68591
68665
+
Trp
CCA
[ENA]
¢þ
>WENV182961086
OKWK01000155
[OKWK] human gut metagenome; stool
36492
36566
+
Trp
CCA
[ENA]
¢þ
>WENV182961661
OKWL01000135
[OKWL] human gut metagenome; stool
38704
38778
+
Trp
CCA
[ENA]
¢þ
>WENV182961847
OKWL01000654
[OKWL] human gut metagenome; stool
6152
6226
+
Trp
CCA
[ENA]
¢þ
>WENV182962061
OKWN01000013
[OKWN] human gut metagenome; stool
241606
241532
-
Trp
CCA
[ENA]
¢þ
>WENV182962392
OKWN01000458
[OKWN] human gut metagenome; stool
12505
12579
+
Trp
CCA
[ENA]
¢þ
>WENV182962728
OKWO01000059
[OKWO] human gut metagenome; stool
76732
76806
+
Trp
CCA
[ENA]
¢þ
>WENV182962735
OKWO01000071
[OKWO] human gut metagenome; stool
52553
52627
+
Trp
CCA
[ENA]
¢þ
>WENV182963296
OKWQ01000070
[OKWQ] human gut metagenome; stool
83742
83668
-
Trp
CCA
[ENA]
¢þ
>WENV182963297
OKWQ01000070
[OKWQ] human gut metagenome; stool
37727
37653
-
Trp
CCA
[ENA]
¢þ
>WENV182965622
OKWT01000008
[OKWT] human gut metagenome; stool
49689
49763
+
Trp
CCA
[ENA]
¢þ
>WENV182965715
OKWT01000070
[OKWT] human gut metagenome; stool
11487
11413
-
Trp
CCA
[ENA]
¢þ
>WENV182967116
OKWZ01000007
[OKWZ] human gut metagenome; stool
287403
287329
-
Trp
CCA
[ENA]
¢þ
>WENV182967117
OKWZ01000007
[OKWZ] human gut metagenome; stool
241388
241314
-
Trp
CCA
[ENA]
¢þ
>C08002638
CP001056
Bacillota
Clostridium botulinum B str. Eklund 17B [NRP] [CP001056]
529060
529134
+
Trp
CCA
[Ensembl]
¡û
>C08002639
CP001056
Bacillota
Clostridium botulinum B str. Eklund 17B [NRP] [CP001056]
539061
539135
+
Trp
CCA
[Ensembl]
¡û
>WENV183087277
OLJG01002332
[OLJG] human gut metagenome; human gut
862
788
-
Trp
CCA
[ENA]
¢þ
>WENV183090113
OLJW01062173
[OLJW] human gut metagenome; human gut
622
548
-
Trp
CCA
[ENA]
¢þ
>WENV183103361
OLNJ01000282
[OLNJ] human gut metagenome; faeces
38158
38084
-
Trp
CCA
[ENA]
¢þ
>WENV183113816
OLNP01042838
[OLNP] human gut metagenome; faeces
378
452
+
Trp
CCA
[ENA]
¢þ
>WENV183128451
OLNZ01007390
[OLNZ] human gut metagenome; faeces
1065
991
-
Trp
CCA
[ENA]
¢þ
>WENV183132755
OLOB01006749
[OLOB] human gut metagenome; faeces
160
86
-
Trp
CCA
[ENA]
¢þ
>WENV183141895
OLOJ01024215
[OLOJ] human gut metagenome; faeces
1458
1532
+
Trp
CCA
[ENA]
¢þ
>WENV183169489
OLPA01003882
[OLPA] human gut metagenome; faeces
9458
9384
-
Trp
CCA
[ENA]
¢þ
>WENV183186889
OLPO01003178
[OLPO] human gut metagenome; faeces
7685
7611
-
Trp
CCA
[ENA]
¢þ
>WENV183228104
OLQQ01032559
[OLQQ] human gut metagenome; faeces
475
401
-
Trp
CCA
[ENA]
¢þ
>WENV183233925
OLQV01006341
[OLQV] human gut metagenome; faeces
3670
3744
+
Trp
CCA
[ENA]
¢þ
>WENV183261153
OLRP01009635
[OLRP] human gut metagenome; faeces
2579
2653
+
Trp
CCA
[ENA]
¢þ
>WENV183266813
OLRT01012683
[OLRT] human gut metagenome; faeces
2107
2181
+
Trp
CCA
[ENA]
¢þ
>WENV183322457
OLVX01002346
[OLVX] human gut metagenome; faeces
9440
9514
+
Trp
CCA
[ENA]
¢þ
>WENV183327463
OLWA01000729
[OLWA] human gut metagenome; faeces
29196
29270
+
Trp
CCA
[ENA]
¢þ
>WENV183470166
OMEJ01004016
[OMEJ] human gut metagenome; feces
1252
1326
+
Trp
CCA
[ENA]
¢þ
>WENV183506514
OMGY01001134
[OMGY] human gut metagenome; human gut
22285
22359
+
Trp
CCA
[ENA]
¢þ
>WENV183520220
OMNT01007366
[OMNT] human gut metagenome; faeces
4224
4298
+
Trp
CCA
[ENA]
¢þ
>WENV183589685
OOCW01002823
[OOCW] human gut metagenome; human gut
5702
5628
-
Trp
CCA
[ENA]
¢þ
>WENV170979547
MTKZ01095965
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
807
881
+
Trp
CCA
[ENA]
¢þ
>C181047844
CP020953
Bacillota
Clostridium drakei SL1 [CP020953]
5017796
5017722
-
Trp
CCA
-
¡û
>W09135087
ACVI01000049
Bacillota
Clostridium carboxidivorans P7 [ACVI]
10927
11001
+
Trp
CCA
[ENA]
¡û
>C181203651
LN908213
Bacillota
Clostridium beijerinckii [LN908213]
633808
633882
+
Trp
CCA
-
¡û
>C181203652
LN908213
Bacillota
Clostridium beijerinckii [LN908213]
635887
635961
+
Trp
CCA
-
¡û
>W141560229
JHXK01000012
Bacillota
Clostridium beijerinckii HUN142 [JHXK]
175782
175708
-
Trp
CCA
[ENA]
¡û
>W141565627
JIBU02000078
Bacillota
Clostridium drakei [JIBU]
35222
35148
-
Trp
CCA
[ENA]
¡û
>W141569506
JIDX01000007
Bacillota
Clostridium scatologenes [JIDX]
188711
188785
+
Trp
CCA
[ENA]
¡û
>W141803791
JPGY01000008
Bacillota
Clostridium pasteurianum DSM 525 = ATCC 6013 [JPGY]
206333
206407
+
Trp
CCA
[ENA]
¡û
>W1911493590
OBIP01000002
Bacillota
Clostridium paraputrificum LH141 [OBIP]
409616
409690
+
Trp
CCA
[ENA]
¡û
>W1911493592
OBIP01000002
Bacillota
Clostridium paraputrificum LH141 [OBIP]
494603
494677
+
Trp
CCA
[ENA]
¡û
>W1911493672
OBIQ01000001
Bacillota
Clostridium paraputrificum LH058 [OBIQ]
36377
36303
-
Trp
CCA
[ENA]
¡û
>W1911493697
OBIQ01000020
Bacillota
Clostridium paraputrificum LH058 [OBIQ]
54444
54518
+
Trp
CCA
[ENA]
¡û
>W1911493847
OBJN01000004
Bacillota
Clostridium paraputrificum LH025 [OBJN]
356409
356483
+
Trp
CCA
[ENA]
¡û
>W1911493849
OBJN01000004
Bacillota
Clostridium paraputrificum LH025 [OBJN]
443668
443742
+
Trp
CCA
[ENA]
¡û
>W1911766226
QXDJ01000007
Bacillota
Clostridium chromiireducens C1 [QXDJ]
123101
123175
+
Trp
CCA
[ENA]
¡û
>W1911766227
QXDJ01000007
Bacillota
Clostridium chromiireducens C1 [QXDJ]
158898
158972
+
Trp
CCA
[ENA]
¡û
>W1810052453
PDCI01000020
Bacillota
Clostridium neonatale LCDC99A006 [PDCI]
131798
131724
-
Trp
CCA
[ENA]
¡û
>W1810052454
PDCI01000020
Bacillota
Clostridium neonatale LCDC99A006 [PDCI]
126463
126389
-
Trp
CCA
[ENA]
¡û
>W1810052556
PDCJ01000004
Bacillota
Clostridium neonatale LCDC99A005 [PDCJ]
134357
134283
-
Trp
CCA
[ENA]
¡û
>W1810052557
PDCJ01000004
Bacillota
Clostridium neonatale LCDC99A005 [PDCJ]
129022
128948
-
Trp
CCA
[ENA]
¡û
>W1810147497
PIQP01000026
Bacillota
Clostridium beijerinckii WB [PIQP]
16798
16724
-
Trp
CCA
[ENA]
¡û
>W1810147498
PIQP01000026
Bacillota
Clostridium beijerinckii WB [PIQP]
14717
14643
-
Trp
CCA
[ENA]
¡û
>W1810250464
PQCR01000005
Bacillota
Clostridium sp. 2-1 [PQCR]
98174
98100
-
Trp
CCA
[ENA]
¡û
>W1810250510
PQCR01000115
Bacillota
Clostridium sp. 2-1 [PQCR]
4256
4182
-
Trp
CCA
[ENA]
¡û
>W1810271458
PRKY01000011
Bacillota
Clostridium diolis WST [PRKY]
40385
40459
+
Trp
CCA
[ENA]
¡û
>W1810271459
PRKY01000011
Bacillota
Clostridium diolis WST [PRKY]
42465
42539
+
Trp
CCA
[ENA]
¡û
>W1810604830
QGMT01000004
Bacillota
Clostridium paraputrificum Gcol.A11 [QGMT]
136200
136126
-
Trp
CCA
[ENA]
¡û
>W1810604831
QGMT01000004
Bacillota
Clostridium paraputrificum Gcol.A11 [QGMT]
90346
90272
-
Trp
CCA
[ENA]
¡û
>C151012369
CP006777
Bacillota
Clostridium beijerinckii ATCC 35702 SA-1 [CP006777]
568733
568807
+
Trp
CCA
[Ensembl]
¡û
>C151012370
CP006777
Bacillota
Clostridium beijerinckii ATCC 35702 SA-1 [CP006777]
570814
570888
+
Trp
CCA
[Ensembl]
¡û
>C151014160
CP006903
Bacillota
Clostridium botulinum 202F [CP006903]
3113786
3113860
+
Trp
CCA
[Ensembl]
¡û
>C151014161
CP006903
Bacillota
Clostridium botulinum 202F [CP006903]
3125440
3125514
+
Trp
CCA
[Ensembl]
¡û
>C151047075
CP009267
Bacillota
Clostridium pasteurianum DSM 525 = ATCC 6013 [CP009267]
3768323
3768249
-
Trp
CCA
[Ensembl]
¡û
>C151047154
CP009268
Bacillota
Clostridium pasteurianum DSM 525 = ATCC 6013 [CP009268]
3768531
3768457
-
Trp
CCA
[Ensembl]
¡û
>C151062271
CP009933
Bacillota
Clostridium scatologenes ATCC 25775 [CP009933]
4897301
4897375
+
Trp
CCA
[Ensembl]
¡û
>C151086671
CP011803
Bacillota
Clostridium carboxidivorans P7 [CP011803]
4231286
4231212
-
Trp
CCA
[Ensembl]
¡û
>C151088365
CP011966
Bacillota
Clostridium beijerinckii NRRL B-598 [CP011966]
5677181
5677107
-
Trp
CCA
-
¡û
>C151088366
CP011966
Bacillota
Clostridium beijerinckii NRRL B-598 [CP011966]
5675100
5675026
-
Trp
CCA
-
¡û
>C151101523
HG917868
Bacillota
Clostridium bornimense type strain: M2/40 [HG917868, HG917869]
2466669
2466595
-
Trp
CCA
[Ensembl]
¡û
>W1510755237
CYSO01000011
Bacillota
Clostridium massiliamazoniense ND2 [CYSO]
1372784
1372710
-
Trp
CCA
[ENA]
¡û
>W11115403
ADEK01000001
Bacillota
Clostridium carboxidivorans P7 [ADEK]
179760
179834
+
Trp
CCA
[ENA]
¡û
>W11176305
AFWX01000001
Bacillota
Clostridium sp. DL-VIII [AFWX]
1183641
1183715
+
Trp
CCA
[ENA]
¡û
>C161023474
CP010086
Bacillota
Clostridium beijerinckii NCIMB 14988 [CP010086]
541157
541231
+
Trp
CCA
[Ensembl]
¡û
>C161023475
CP010086
Bacillota
Clostridium beijerinckii NCIMB 14988 [CP010086]
543238
543312
+
Trp
CCA
[Ensembl]
¡û
>W121102372
AKWA01000082
Bacillota
Clostridium beijerinckii G117 [AKWA]
16798
16724
-
Trp
CCA
[ENA]
¡û
>W121102373
AKWA01000082
Bacillota
Clostridium beijerinckii G117 [AKWA]
14717
14643
-
Trp
CCA
[ENA]
¡û
>W1610061694
BCMV01000008
Bacillota
Sarcina ventriculi [BCMV]
192841
192767
-
Trp
CCA
[ENA]
¡û
>W1610061695
BCMV01000008
Bacillota
Sarcina ventriculi [BCMV]
192738
192664
-
Trp
CCA
[ENA]
¡û
>W1610061755
BCMW01000007
Bacillota
Sarcina ventriculi [BCMW]
59353
59427
+
Trp
CCA
[ENA]
¡û
>W1610061756
BCMW01000007
Bacillota
Sarcina ventriculi [BCMW]
59456
59530
+
Trp
CCA
[ENA]
¡û
>W1610101380
CYZR01000005
Bacillota
Sarcina ventriculi [CYZR]
198877
198803
-
Trp
CCA
[ENA]
¡û
>W1610101381
CYZR01000005
Bacillota
Sarcina ventriculi [CYZR]
198774
198700
-
Trp
CCA
[ENA]
¡û
>W1610101664
CYZW01000001
Bacillota
Clostridium paraputrificum [CYZW]
154613
154687
+
Trp
CCA
[ENA]
¡û
>W1610101665
CYZW01000001
Bacillota
Clostridium paraputrificum [CYZW]
200539
200613
+
Trp
CCA
[ENA]
¡û
>W1610101757
CYZX01000010
Bacillota
Clostridium disporicum [CYZX]
56568
56494
-
Trp
CCA
[ENA]
¡û
>W1610101758
CYZX01000010
Bacillota
Clostridium disporicum [CYZX]
47230
47156
-
Trp
CCA
[ENA]
¡û
>W1610104324
CZBQ01000001
Bacillota
Clostridium paraputrificum [CZBQ]
369567
369493
-
Trp
CCA
[ENA]
¡û
>W1610104325
CZBQ01000001
Bacillota
Clostridium paraputrificum [CZBQ]
323552
323478
-
Trp
CCA
[ENA]
¡û
>W1610112613
CZLD01000016
Bacillota
Clostridium neonatale [CZLD]
201761
201835
+
Trp
CCA
[ENA]
¡û
>W1610112614
CZLD01000016
Bacillota
Clostridium neonatale [CZLD]
207096
207170
+
Trp
CCA
[ENA]
¡û
>C131012941
CP004121
Bacillota
Clostridium saccharoperbutylacetonicum N1-4[HMT] [CP004121]
799936
800010
+
Trp
CCA
[Ensembl]
¡û
>W1610979230
LWAE01000001
Bacillota
Clostridium magnum DSM 2767 [LWAE]
352824
352898
+
Trp
CCA
[ENA]
¡û
>W1611056107
MAPZ01000019
Bacillota
Clostridium paraputrificum [MAPZ]
546895
546821
-
Trp
CCA
[ENA]
¡û
>W1611056108
MAPZ01000019
Bacillota
Clostridium paraputrificum [MAPZ]
500973
500899
-
Trp
CCA
[ENA]
¡û
>W1611062447
MBAF01000002
Bacillota
Clostridium beijerinckii [MBAF]
108735
108809
+
Trp
CCA
[ENA]
¡û
>W1611062448
MBAF01000002
Bacillota
Clostridium beijerinckii [MBAF]
110816
110890
+
Trp
CCA
[ENA]
¡û
>WENV082874
BAAW01008828
Gut microbiome of Human (healthy human sample F1-U, Infant, Feale)
306
382
+
Trp
CCA
[ENA]
>WENV082914
BAAW01012237
Gut microbiome of Human (healthy human sample F1-U, Infant, Feale)
288
364
+
Trp
CCA
[ENA]
>W1710059359
BCMV01000008
Bacillota
Sarcina ventriculi [BCMV]
192841
192767
-
Trp
CCA
[ENA]
¡û
>W1710059360
BCMV01000008
Bacillota
Sarcina ventriculi [BCMV]
192738
192664
-
Trp
CCA
[ENA]
¡û
>W1710059420
BCMW01000007
Bacillota
Sarcina ventriculi [BCMW]
59353
59427
+
Trp
CCA
[ENA]
¡û
>W1710059421
BCMW01000007
Bacillota
Sarcina ventriculi [BCMW]
59456
59530
+
Trp
CCA
[ENA]
¡û
>W1710104135
CYZR01000005
Bacillota
Sarcina ventriculi [CYZR]
198877
198803
-
Trp
CCA
[ENA]
¡û
>W1710104136
CYZR01000005
Bacillota
Sarcina ventriculi [CYZR]
198774
198700
-
Trp
CCA
[ENA]
¡û
>W1710104419
CYZW01000001
Bacillota
Clostridium paraputrificum [CYZW]
154613
154687
+
Trp
CCA
[ENA]
¡û
>W1710104420
CYZW01000001
Bacillota
Clostridium paraputrificum [CYZW]
200539
200613
+
Trp
CCA
[ENA]
¡û
>W1710104512
CYZX01000010
Bacillota
Clostridium disporicum [CYZX]
56568
56494
-
Trp
CCA
[ENA]
¡û
>W1710104513
CYZX01000010
Bacillota
Clostridium disporicum [CYZX]
47230
47156
-
Trp
CCA
[ENA]
¡û
>W1710107028
CZBQ01000001
Bacillota
Clostridium paraputrificum [CZBQ]
369567
369493
-
Trp
CCA
[ENA]
¡û
>W1710107029
CZBQ01000001
Bacillota
Clostridium paraputrificum [CZBQ]
323552
323478
-
Trp
CCA
[ENA]
¡û
>W1710115317
CZLD01000016
Bacillota
Clostridium neonatale [CZLD]
201761
201835
+
Trp
CCA
[ENA]
¡û
>W1710115318
CZLD01000016
Bacillota
Clostridium neonatale [CZLD]
207096
207170
+
Trp
CCA
[ENA]
¡û
>W1710586744
FQXL01000015
Bacillota
Clostridium magnum DSM 2767 [FQXL]
104713
104639
-
Trp
CCA
[ENA]
¡û
>W1710587180
FQXU01000019
Bacillota
Clostridium intestinale DSM 6191 [FQXU]
46325
46251
-
Trp
CCA
[ENA]
¡û
>W1710588666
FQZO01000001
Bacillota
Clostridium amylolyticum [FQZO]
138756
138830
+
Trp
CCA
[ENA]
¡û
>W1710731268
LFYL01000002
Bacillota
Clostridium pasteurianum [LFYL]
1216820
1216746
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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