tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.400244 (97 seq.)
>W1710808946 LKDZ01000051 Betaproteobacteria Variovorax boronicumulans [LKDZ] 9651 9725 + Arg CCT [ENA] ¡û
>W1710821633 LKTU01000021 Betaproteobacteria Variovorax paradoxus [LKTU] 78164 78090 - Arg CCT [ENA] ¡û
>W1710821674 LKTV01000014 Betaproteobacteria Variovorax paradoxus [LKTV] 71366 71292 - Arg CCT [ENA] ¡û
>W1710821722 LKTW01000012 Betaproteobacteria Variovorax paradoxus [LKTW] 69741 69667 - Arg CCT [ENA] ¡û
>W1710821788 LKTX01000026 Betaproteobacteria Variovorax paradoxus [LKTX] 41295 41369 + Arg CCT [ENA] ¡û
>W1710821829 LKTY01000009 Betaproteobacteria Variovorax paradoxus [LKTY] 71291 71217 - Arg CCT [ENA] ¡û
>W1710821882 LKTZ01000010 Betaproteobacteria Variovorax paradoxus [LKTZ] 71359 71285 - Arg CCT [ENA] ¡û
>W1710860143 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 10008 9934 - Arg CCT [ENA] ¡û
>W1710861787 LMDW01000018 Betaproteobacteria Variovorax sp. Root411 [LMDW] 173279 173353 + Arg CCT [ENA] ¡û
>W1710862489 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 244943 245017 + Arg CCT [ENA] ¡û
>W1710863079 LMEV01000016 Betaproteobacteria Variovorax sp. Root473 [LMEV] 273295 273221 - Arg CCT [ENA] ¡û
>W1710882318 LMTS01000092 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 26555 26481 - Arg CCT [ENA] ¡û
>W1711123835 LUJJ01000024 Betaproteobacteria Variovorax boronicumulans [LUJJ] 16263 16337 + Arg CCT [ENA] ¡û
>W1711143363 LVHG01000052 Betaproteobacteria Variovorax paradoxus [LVHG] 11767 11841 + Arg CCT [ENA] ¡û
>W1711386497 MEFM01000019 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 235350 235276 - Arg CCT [ENA] ¡û
>W1711387493 MEGR01000048 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 34669 34595 - Arg CCT [ENA] ¡û
>W1711506616 MKWO01000019 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 295789 295863 + Arg CCT [ENA] ¡û
>W131174619 ARIP01000044 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 63608 63682 + Arg CCT [ENA] ¡û
>W131180336 ARNA01000041 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 179526 179600 + Arg CCT [ENA] ¡û
>WENV181364808 OFPD01001922 [OFPD] sediment metagenome; Lake sediment 1037 963 - Arg CCT [ENA] ¢þ
>WENV181364982 OFPG01006291 [OFPG] sediment metagenome; Lake sediment 91 165 + Arg CCT [ENA] ¢þ
>W141170107 AXWZ01000014 Betaproteobacteria Variovorax sp. JGI 0001020-M05 [AXWZ] 12505 12579 + Arg CCT [ENA] ¡û
>W141170117 AXXB01000002 Betaproteobacteria Variovorax sp. JGI 0001016-C20 [AXXB] 36407 36481 + Arg CCT [ENA] ¡û
>W141170125 AXXC01000011 Betaproteobacteria Variovorax sp. JGI 0001014-H11 [AXXC] 19764 19838 + Arg CCT [ENA] ¡û
>W141170134 AXXE01000009 Betaproteobacteria Variovorax sp. JGI 0001011-P21 [AXXE] 10575 10649 + Arg CCT [ENA] ¡û
>W141170370 AXXS01000023 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 6045 5971 - Arg CCT [ENA] ¡û
>W141170379 AXXT01000006 Betaproteobacteria Variovorax sp. JGI 0001013-L10 [AXXT] 14533 14607 + Arg CCT [ENA] ¡û
>WENV183731130 PJTS01011844 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 829 903 + Arg CCT [ENA] ¢þ
>WENV183735149 PJUA01001238 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 1668 1742 + Arg CCT [ENA] ¢þ
>WENV183735664 PJUB01000377 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 16419 16493 + Arg CCT [ENA] ¢þ
>WENV183736246 PJUC01000242 [PJUC] soil metagenome; Soil enriched on filter paper 24643 24569 - Arg CCT [ENA] ¢þ
>WENV183741536 PJUG01000050 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 127796 127722 - Arg CCT [ENA] ¢þ
>WENV183741974 PJUH01000023 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 110180 110254 + Arg CCT [ENA] ¢þ
>WENV183746517 POYD01049250 [POYD] biofilm metagenome; PVC pipe from biofilm reactor 1002 1073 + Arg CCT [ENA] ¢þ
>WENV170559495 CXWL01125957 [CXWL] groundwater metagenome; biofilm material 3426 3352 - Arg CCT [ENA] ¢þ
>WENV170706902 LNAP01008675 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 23 97 + Arg CCT [ENA] ¢þ
>WENV170707896 LNAP01038287 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 23 97 + Arg CCT [ENA] ¢þ
>C181078476 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 6090356 6090430 + Arg CCT - ¡û
>C181159393 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 4983326 4983252 - Arg CCT - ¡û
>W141558075 JHVQ01000005 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 439632 439706 + Arg CCT [ENA] ¡û
>W09119937 ACEE01000032 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 33267 33341 + Arg CCT [ENA] ¡û
>C09111105 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 4743371 4743445 + Arg CCT [Ensembl] ¡û
>C141002552 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 4918934 4919008 + Arg CCT [Ensembl] ¡û
>W1910792824 MRCN01000005 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 296924 296850 - Arg CCT [ENA] ¡û
>W1911496719 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 1330894 1330820 - Arg CCT [ENA] ¡û
>W1911647331 QAJK01000035 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 43758 43684 - Arg CCT [ENA] ¡û
>W1911775307 QXMN01000003 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 54567 54641 + Arg CCT [ENA] ¡û
>W1810046181 NNBQ01000003 Betaproteobacteria Variovorax sp. B4 [NNBQ] 262691 262765 + Arg CCT [ENA] ¡û
>W1810046284 NNBR01000004 Betaproteobacteria Variovorax sp. B2 [NNBR] 262692 262766 + Arg CCT [ENA] ¡û
>W1810072214 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 2287059 2287133 + Arg CCT [ENA] ¡û
>W1810192715 PKMT01000002 Betaproteobacteria Variovorax sp. RO1 [PKMT] 10285 10359 + Arg CCT [ENA] ¡û
>W1810392064 PXZZ01000055 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 21873 21947 + Arg CCT [ENA] ¡û
>W1810486665 QAYA01000006 Betaproteobacteria Variovorax sp. GV040 [QAYA] 155199 155273 + Arg CCT [ENA] ¡û
>W1810672544 QJTM01000007 Betaproteobacteria Variovorax sp. GV035 [QJTM] 155199 155273 + Arg CCT [ENA] ¡û
>W1810676102 QKLT01000005 Betaproteobacteria Variovorax sp. GV042 [QKLT] 155199 155273 + Arg CCT [ENA] ¡û
>W1810682483 QKUE01000007 Betaproteobacteria Variovorax sp. GV004 [QKUE] 155199 155273 + Arg CCT [ENA] ¡û
>W1511352978 JROV01001124 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 631 557 - Arg CCT [ENA] ¡û
>C11123584 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 5666510 5666584 + Arg CCT [Ensembl] ¡û
>W1511508942 JXQQ01000084 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 77821 77895 + Arg CCT [ENA] ¡û
>W1511555024 JZWI01000054 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 36701 36775 + Arg CCT [ENA] ¡û
>C161073185 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 2838617 2838543 - Arg CCT [Ensembl] ¡û
>W1610047718 BBDP01000025 Betaproteobacteria Variovorax sp. RA8 [BBDP] 12240 12166 - Arg CCT [ENA] ¡û
>W1610072136 BCUS01000003 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 2960 3034 + Arg CCT [ENA] ¡û
>W1610072220 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 113597 113523 - Arg CCT [ENA] ¡û
>W121084958 AKIW01000025 Betaproteobacteria Variovorax sp. CF313 [AKIW] 45969 45895 - Arg CCT [ENA] ¡û
>W1610685595 LKTU01000021 Betaproteobacteria Variovorax paradoxus [LKTU] 78164 78090 - Arg CCT [ENA] ¡û
>W1610685636 LKTV01000014 Betaproteobacteria Variovorax paradoxus [LKTV] 71366 71292 - Arg CCT [ENA] ¡û
>W1610685684 LKTW01000012 Betaproteobacteria Variovorax paradoxus [LKTW] 69741 69667 - Arg CCT [ENA] ¡û
>W1610685750 LKTX01000026 Betaproteobacteria Variovorax paradoxus [LKTX] 41295 41369 + Arg CCT [ENA] ¡û
>W1610685791 LKTY01000009 Betaproteobacteria Variovorax paradoxus [LKTY] 71291 71217 - Arg CCT [ENA] ¡û
>W1610685844 LKTZ01000010 Betaproteobacteria Variovorax paradoxus [LKTZ] 71359 71285 - Arg CCT [ENA] ¡û
>W1610722489 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 10008 9934 - Arg CCT [ENA] ¡û
>W1610724133 LMDW01000018 Betaproteobacteria Variovorax sp. Root411 [LMDW] 173279 173353 + Arg CCT [ENA] ¡û
>W1610724835 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 244943 245017 + Arg CCT [ENA] ¡û
>W1610725425 LMEV01000016 Betaproteobacteria Variovorax sp. Root473 [LMEV] 273295 273221 - Arg CCT [ENA] ¡û
>W1610744244 LMTS01000092 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 26555 26481 - Arg CCT [ENA] ¡û
>W1610954371 LVHG01000052 Betaproteobacteria Variovorax paradoxus [LVHG] 11767 11841 + Arg CCT [ENA] ¡û
>W1710044228 BBDP01000025 Betaproteobacteria Variovorax sp. RA8 [BBDP] 12240 12166 - Arg CCT [ENA] ¡û
>W1710069338 BCUS01000003 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 2960 3034 + Arg CCT [ENA] ¡û
>W1710069422 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 113597 113523 - Arg CCT [ENA] ¡û
>W1710506211 FMUJ01000008 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 248757 248683 - Arg CCT [ENA] ¡û
>W1710512963 FMZU01000018 Betaproteobacteria Variovorax sp. CF079 [FMZU] 150504 150430 - Arg CCT [ENA] ¡û
>W1710517936 FNDR01000004 Betaproteobacteria Variovorax sp. OV700 [FNDR] 310505 310579 + Arg CCT [ENA] ¡û
>W1710530041 FNOL01000015 Betaproteobacteria Variovorax sp. YR634 [FNOL] 7257 7183 - Arg CCT [ENA] ¡û
>W1710531377 FNPM01000008 Betaproteobacteria Variovorax sp. YR266 [FNPM] 237402 237328 - Arg CCT [ENA] ¡û
>W1710534034 FNRO01000003 Betaproteobacteria Variovorax sp. YR216 [FNRO] 492937 492863 - Arg CCT [ENA] ¡û
>W1710538146 FNUI01000008 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 186846 186920 + Arg CCT [ENA] ¡û
>W1710539581 FNVM01000013 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 187627 187701 + Arg CCT [ENA] ¡û
>W1710542725 FNZJ01000010 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 55742 55816 + Arg CCT [ENA] ¡û
>W1710545317 FOBJ01000017 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 50994 50920 - Arg CCT [ENA] ¡û
>W1710554311 FOII01000013 Betaproteobacteria Variovorax sp. OV084 [FOII] 185303 185377 + Arg CCT [ENA] ¡û
>W1710557167 FOKS01000014 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 187453 187527 + Arg CCT [ENA] ¡û
>W1710558166 FOLP01000010 Betaproteobacteria Variovorax sp. OK212 [FOLP] 55742 55816 + Arg CCT [ENA] ¡û
>W1710562288 FOOV01000028 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 27412 27338 - Arg CCT [ENA] ¡û
>W1710571874 FOWG01000008 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 195786 195860 + Arg CCT [ENA] ¡û
>W1710572135 FOWL01000010 Betaproteobacteria Variovorax sp. OK605 [FOWL] 54620 54694 + Arg CCT [ENA] ¡û
>W1710573309 FOXJ01000008 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 235069 234995 - Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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