tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.400288 (116 seq.)
>W1710861489 LMDQ01000016 Betaproteobacteria Acidovorax sp. Root402 [LMDQ] 97518 97592 + Arg CCT [ENA] ¡û
>W1710865360 LMGP01000016 Betaproteobacteria Acidovorax sp. Root568 [LMGP] 164289 164363 + Arg CCT [ENA] ¡û
>W1710866634 LMHQ01000001 Betaproteobacteria Acidovorax sp. Root70 [LMHQ] 158234 158308 + Arg CCT [ENA] ¡û
>W1710867461 LMIH01000012 Betaproteobacteria Acidovorax sp. Root217 [LMIH] 324043 323969 - Arg CCT [ENA] ¡û
>W1710867567 LMIJ01000030 Betaproteobacteria Acidovorax sp. Root219 [LMIJ] 9905 9979 + Arg CCT [ENA] ¡û
>W1710868453 LMJC01000001 Betaproteobacteria Acidovorax sp. Root267 [LMJC] 767349 767423 + Arg CCT [ENA] ¡û
>W1710868715 LMJH01000008 Betaproteobacteria Acidovorax sp. Root275 [LMJH] 358184 358110 - Arg CCT [ENA] ¡û
>W1710872388 LMLY01000023 Betaproteobacteria Acidovorax sp. Leaf76 [LMLY] 368506 368432 - Arg CCT [ENA] ¡û
>W1710872445 LMLZ01000020 Betaproteobacteria Acidovorax sp. Leaf78 [LMLZ] 316033 315959 - Arg CCT [ENA] ¡û
>W1710872608 LMMC01000023 Betaproteobacteria Acidovorax sp. Leaf84 [LMMC] 361334 361260 - Arg CCT [ENA] ¡û
>W1710873418 LMMT01000036 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 415893 415967 + Arg CCT [ENA] ¡û
>W1710873494 LMMV01000005 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 65849 65923 + Arg CCT [ENA] ¡û
>W1710873739 LMNA01000009 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 2631 2705 + Arg CCT [ENA] ¡û
>W1710877007 LMPT01000018 Betaproteobacteria Acidovorax sp. Leaf191 [LMPT] 368505 368431 - Arg CCT [ENA] ¡û
>W1710892940 LNEG01000138 Betaproteobacteria Burkholderiales bacterium Ga0074133 [LNEG] 30176 30250 + Arg CCT [ENA] ¡û
>W1711073184 LSIH01000552 Betaproteobacteria Acidovorax delafieldii [LSIH] 21510 21436 - Arg CCT [ENA] ¡û
>W1711073540 LSIQ01000201 Betaproteobacteria Comamonadaceae bacterium CCH12-A10 [LSIQ] 8292 8366 + Arg CCT [ENA] ¡û
>W1711073661 LSIU01000391 Betaproteobacteria Comamonadaceae bacterium CCH4-C5 [LSIU] 54 128 + Arg CCT [ENA] ¡û
>W1711075789 LSKS01000105 Betaproteobacteria Acidovorax sp. CCH12-A4 [LSKS] 10568 10642 + Arg CCT [ENA] ¡û
>W1711124978 LUKZ01000001 Betaproteobacteria Acidovorax sp. GW101-3H11 [LUKZ] 153925 153999 + Arg CCT [ENA] ¡û
>W131223775 AUCH01000019 Betaproteobacteria Azovibrio restrictus DSM 23866 [AUCH] 61893 61967 + Arg CCT [ENA] ¡û
>W1711384867 MEDM01000030 Betaproteobacteria Acidovorax sp. SCN 65-28 [MEDM] 23057 22983 - Arg CCT [ENA] ¡û
>W1711394763 MERR01000009 Betaproteobacteria Burkholderiales bacterium GWA2_64_37 [MERR] 51889 51963 + Arg CCT [ENA] ¡û
>W1711501337 MKRM01000189 Betaproteobacteria Acidovorax sp. 65-7 [MKRM] 13921 13847 - Arg CCT [ENA] ¡û
>W1711504587 MKUS01000009 Betaproteobacteria Burkholderiales bacterium 68-12 [MKUS] 6358 6432 + Arg CCT [ENA] ¡û
>W1711504625 MKUT01000032 Betaproteobacteria Burkholderiales bacterium 68-20 [MKUT] 29312 29238 - Arg CCT [ENA] ¡û
>W1712096736 NIAZ01000135 Betaproteobacteria Acidovorax sp. T1m [NIAZ] 1547 1621 + Arg CCT [ENA] ¡û
>C171049705 CP016447 Betaproteobacteria Acidovorax sp. RAC01 [CP016447] 2598964 2598890 - Arg CCT - ¡û
>C171118084 CP021359 Betaproteobacteria Acidovorax carolinensis NA2 [CP021359] 812660 812586 - Arg CCT - ¡û
>C171118135 CP021361 Betaproteobacteria Acidovorax carolinensis NA3 [CP021361] 803255 803181 - Arg CCT - ¡û
>C171120937 CP021648 Betaproteobacteria Acidovorax sp. T1 [CP021648] 3103000 3103074 + Arg CCT - ¡û
>W131178428 ARLO01000070 Betaproteobacteria Curvibacter lanceolatus ATCC 14669 [ARLO] 152053 152127 + Arg CCT [ENA] ¡û
>W131227110 AUEX01000006 Betaproteobacteria Acidovorax sp. JHL-9 [AUEX] 60000 60074 + Arg CCT [ENA] ¡û
>C026298 CP000542 Betaproteobacteria Verminephrobacter eiseniae EF01-2 [CP000542] 5037284 5037358 + Arg CCT [Ensembl] ¡û
>WENV180248756 OBEQ010138030 [OBEQ] groundwater metagenome; groundwater 306 232 - Arg CCT [ENA] ¢þ
>WENV180284619 OBID01071203 [OBID] metagenome; sludge 305 379 + Arg CCT [ENA] ¢þ
>WENV180355636 OBNI01012724 [OBNI] sediment metagenome; sediment 220 294 + Arg CCT [ENA] ¢þ
>WENV181311565 OFJB01004569 [OFJB] sludge metagenome; sludge 4149 4223 + Arg CCT [ENA] ¢þ
>WENV181364952 OFPG01000408 [OFPG] sediment metagenome; Lake sediment 380 454 + Arg CCT [ENA] ¢þ
>WENV181414282 OGCL01000172 [OGCL] hot springs metagenome; Hot spring water 59430 59356 - Arg CCT [ENA] ¢þ
>WENV181414534 OGCL01000587 [OGCL] hot springs metagenome; Hot spring water 5845 5771 - Arg CCT [ENA] ¢þ
>W141238141 BBJX01000008 Betaproteobacteria Comamonas granuli NBRC 101663 [BBJX] 78776 78702 - Arg CCT [ENA] ¡û
>W141276689 JADZ01000014 Betaproteobacteria Curvibacter gracilis ATCC BAA-807 [JADZ] 2083 2009 - Arg CCT [ENA] ¡û
>W141278790 JAFU01000004 Betaproteobacteria Acidovorax sp. JHL-3 [JAFU] 643982 644056 + Arg CCT [ENA] ¡û
>WENV183743513 PJUJ01003223 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 1171 1245 + Arg CCT [ENA] ¢þ
>WENV183744794 PJUL01000246 [PJUL] feces metagenome; Chicken feces enriched on filter paper 36544 36470 - Arg CCT [ENA] ¢þ
>WENV183744831 PJUL01000346 [PJUL] feces metagenome; Chicken feces enriched on filter paper 29276 29202 - Arg CCT [ENA] ¢þ
>WENV170556658 CXWL01011620 [CXWL] groundwater metagenome; biofilm material 20478 20552 + Arg CCT [ENA] ¢þ
>WENV170605466 FUWD010490128 [FUWD] metagenome; unknown 229 303 + Arg CCT [ENA] ¢þ
>WENV170707589 LNAP01026284 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 431 505 + Arg CCT [ENA] ¢þ
>WENV170708384 LNAP01076034 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 804 730 - Arg CCT [ENA] ¢þ
>WENV170708538 LNAP01093431 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 152 226 + Arg CCT [ENA] ¢þ
>WENV170709587 LNFM01000497 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 49991 49917 - Arg CCT [ENA] ¢þ
>C191099904 CP033069 Betaproteobacteria Acidovorax sp. 1608163 [CP033069] 1029285 1029211 - Arg CCT - ¡û
>W09106058 AASQ01000038 Betaproteobacteria Verminephrobacter eiseniae EF01-2 [AASQ] 25090 25016 - Arg CCT [ENA] ¡û
>W09133938 ACQT01000161 Betaproteobacteria Acidovorax delafieldii 2AN [ACQT] 7877 7803 - Arg CCT [ENA] ¡û
>W1910179178 BJHU01000009 Betaproteobacteria Acidovorax sp. NB1 [BJHU] 170261 170187 - Arg CCT [ENA] ¡û
>W1910699754 MERV01000013 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_64_960 [MERV] 50886 50960 + Arg CCT [ENA] ¡û
>W1910699804 MERW01000018 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19 [MERW] 538906 538980 + Arg CCT [ENA] ¡û
>W1910699858 MERY01000363 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_63_9 [MERY] 628 702 + Arg CCT [ENA] ¡û
>W1910699968 MESB01000220 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_65_48 [MESB] 982 1056 + Arg CCT [ENA] ¡û
>W1910700262 MESJ01000010 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_33 [MESJ] 196031 196105 + Arg CCT [ENA] ¡û
>W1910700372 MESL01000021 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 [MESL] 146182 146256 + Arg CCT [ENA] ¡û
>W1911114337 NOIG01000012 Betaproteobacteria Acidovorax kalamii KNDSW-TSA6 [NOIG] 179915 179989 + Arg CCT [ENA] ¡û
>W1911768557 QXGR01000012 Betaproteobacteria Simplicispira lacusdiani CPCC 100842 [QXGR] 108227 108153 - Arg CCT [ENA] ¡û
>W1911770737 QXJC01000003 Betaproteobacteria Simplicispira hankyongi NY-02 [QXJC] 289922 289996 + Arg CCT [ENA] ¡û
>W1911775418 QXNC01000023 Betaproteobacteria Simplicispira metamorpha NBRC 13960 [QXNC] 58362 58436 + Arg CCT [ENA] ¡û
>W1810071522 PEET01000001 Betaproteobacteria Acidovorax sp. 59 [PEET] 511402 511328 - Arg CCT [ENA] ¡û
>W1810071601 PEEV01000001 Betaproteobacteria Acidovorax sp. 56 [PEEV] 2230506 2230580 + Arg CCT [ENA] ¡û
>W1810072473 PEFJ01000001 Betaproteobacteria Acidovorax sp. 62 [PEFJ] 2888220 2888294 + Arg CCT [ENA] ¡û
>W1810089255 PGEP01000001 Betaproteobacteria Acidovorax sp. 69 [PGEP] 1122973 1122899 - Arg CCT [ENA] ¡û
>W1810173352 PJMZ01000001 Betaproteobacteria Acidovorax sp. 30 [PJMZ] 4442431 4442505 + Arg CCT [ENA] ¡û
>W1810474673 QAIM01000024 Betaproteobacteria Acidovorax sp. HMWF018 [QAIM] 11954 11880 - Arg CCT [ENA] ¡û
>W1810486289 QAXU01000001 Betaproteobacteria Acidovorax sp. CF301 [QAXU] 249285 249211 - Arg CCT [ENA] ¡û
>W1810513843 QBTZ01000001 Betaproteobacteria Acidovorax sp. 107 [QBTZ] 338183 338109 - Arg CCT [ENA] ¡û
>W1810573505 QEKU01000001 Betaproteobacteria Acidovorax sp. 99 [QEKU] 1065838 1065912 + Arg CCT [ENA] ¡û
>W1810677483 QKMS01000032 Betaproteobacteria Acidovorax sp. OV235 [QKMS] 17650 17724 + Arg CCT [ENA] ¡û
>W1810683047 QKVP01000003 Betaproteobacteria Acidovorax sp. ST3 [QKVP] 455318 455392 + Arg CCT [ENA] ¡û
>W1810696147 QLTA01000033 Betaproteobacteria Paracidovorax anthurii CFPB 3232 [QLTA] 3806 3732 - Arg CCT [ENA] ¡û
>W1810697070 QLTU01000006 Betaproteobacteria Acidovorax defluvii DSM 12644 [QLTU] 108070 107996 - Arg CCT [ENA] ¡û
>W1810759413 QPJK01000001 Betaproteobacteria Pseudorhodoferax soli DSM 21634 [QPJK] 1353633 1353707 + Arg CCT [ENA] ¡û
>SRA1031252 SRR035087.400712 454 Sequencing (SRP001808) 253 179 - Arg CCT [SRA]
>W1511518950 JXYQ01000068 Betaproteobacteria Acidovorax temperans KY4 [JXYQ] 28020 28094 + Arg CCT [ENA] ¡û
>W11155839 AFAL01000364 Betaproteobacteria Verminephrobacter aporrectodeae At4 [AFAL] 28360 28286 - Arg CCT [ENA] ¡û
>W11156532 AFBG01000015 Betaproteobacteria Acidovorax radicis N35 [AFBG] 46334 46408 + Arg CCT [ENA] ¡û
>W11156591 AFBH01000017 Betaproteobacteria Acidovorax radicis N35v [AFBH] 46357 46431 + Arg CCT [ENA] ¡û
>W1610062774 BCNT01000007 Betaproteobacteria Comamonas terrae [BCNT] 121022 120948 - Arg CCT [ENA] ¡û
>W121019074 AGTS01000036 Betaproteobacteria Acidovorax sp. NO-1 [AGTS] 965 891 - Arg CCT [ENA] ¡û
>W121086427 AKJX01000137 Betaproteobacteria Acidovorax sp. CF316 [AKJX] 41935 42009 + Arg CCT [ENA] ¡û
>C131008672 CP003872 Betaproteobacteria Acidovorax sp. KKS102 [CP003872] 4221708 4221782 + Arg CCT [Ensembl] ¡û
>W1610623715 LHUP01000241 Betaproteobacteria Acidovorax sp. SD340 [LHUP] 10492 10566 + Arg CCT [ENA] ¡û
>W1610723835 LMDQ01000016 Betaproteobacteria Acidovorax sp. Root402 [LMDQ] 97518 97592 + Arg CCT [ENA] ¡û
>W1610727706 LMGP01000016 Betaproteobacteria Acidovorax sp. Root568 [LMGP] 164289 164363 + Arg CCT [ENA] ¡û
>W1610728980 LMHQ01000001 Betaproteobacteria Acidovorax sp. Root70 [LMHQ] 158234 158308 + Arg CCT [ENA] ¡û
>W1610729807 LMIH01000012 Betaproteobacteria Acidovorax sp. Root217 [LMIH] 324043 323969 - Arg CCT [ENA] ¡û
>W1610729913 LMIJ01000030 Betaproteobacteria Acidovorax sp. Root219 [LMIJ] 9905 9979 + Arg CCT [ENA] ¡û
>W1610730799 LMJC01000001 Betaproteobacteria Acidovorax sp. Root267 [LMJC] 767349 767423 + Arg CCT [ENA] ¡û
>W1610731061 LMJH01000008 Betaproteobacteria Acidovorax sp. Root275 [LMJH] 358184 358110 - Arg CCT [ENA] ¡û
>W1610734734 LMLY01000023 Betaproteobacteria Acidovorax sp. Leaf76 [LMLY] 368506 368432 - Arg CCT [ENA] ¡û
>W1610734791 LMLZ01000020 Betaproteobacteria Acidovorax sp. Leaf78 [LMLZ] 316033 315959 - Arg CCT [ENA] ¡û
>W1610734954 LMMC01000023 Betaproteobacteria Acidovorax sp. Leaf84 [LMMC] 361334 361260 - Arg CCT [ENA] ¡û
>W1610735764 LMMT01000036 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 415893 415967 + Arg CCT [ENA] ¡û
>W1610735840 LMMV01000005 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 65849 65923 + Arg CCT [ENA] ¡û
>W1610736085 LMNA01000009 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 2631 2705 + Arg CCT [ENA] ¡û
>W1610739353 LMPT01000018 Betaproteobacteria Acidovorax sp. Leaf191 [LMPT] 368505 368431 - Arg CCT [ENA] ¡û
>W1610753206 LNEG01000138 Betaproteobacteria Burkholderiales bacterium Ga0074133 [LNEG] 30176 30250 + Arg CCT [ENA] ¡û
>W1610912489 LSIH01000552 Betaproteobacteria Acidovorax delafieldii [LSIH] 21510 21436 - Arg CCT [ENA] ¡û
>W1610912845 LSIQ01000201 Betaproteobacteria Comamonadaceae bacterium CCH12-A10 [LSIQ] 8292 8366 + Arg CCT [ENA] ¡û
>W1610912966 LSIU01000391 Betaproteobacteria Comamonadaceae bacterium CCH4-C5 [LSIU] 54 128 + Arg CCT [ENA] ¡û
>W1610915094 LSKS01000105 Betaproteobacteria Acidovorax sp. CCH12-A4 [LSKS] 10568 10642 + Arg CCT [ENA] ¡û
>W1610935911 LUKZ01000001 Betaproteobacteria Acidovorax sp. GW101-3H11 [LUKZ] 153925 153999 + Arg CCT [ENA] ¡û
>W1710060250 BCNT01000007 Betaproteobacteria Comamonas terrae [BCNT] 121022 120948 - Arg CCT [ENA] ¡û
>W1710512056 FMZC01000003 Betaproteobacteria Paracidovorax valerianellae [FMZC] 329539 329613 + Arg CCT [ENA] ¡û
>W1710559432 FOMQ01000002 Betaproteobacteria Paracidovorax konjaci [FOMQ] 215481 215407 - Arg CCT [ENA] ¡û
>W1710607789 FXAH01000019 Betaproteobacteria Trinickia caryophylli [FXAH] 114892 114818 - Arg CCT [ENA] ¡û
>W1710754805 LHUP01000241 Betaproteobacteria Acidovorax sp. SD340 [LHUP] 10492 10566 + Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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