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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.400869 (121 seq.)
>C173000018
CP009244
Actinomycetota
Corynebacterium ammoniagenes DSM 20306 DSM 20306 [CP009244]
1335272
1335344
+
Val
GAC
-
¡û
>C173000019
CP009244
Actinomycetota
Corynebacterium ammoniagenes DSM 20306 DSM 20306 [CP009244]
1335620
1335692
+
Val
GAC
-
¡û
>C173000020
CP009251
Actinomycetota
Corynebacterium stationis 622 [CP009251]
1275347
1275421
+
Val
GAC
-
¡û
>C173000021
CP009251
Actinomycetota
Corynebacterium stationis 622 [CP009251]
1275663
1275735
+
Val
GAC
-
¡û
>C173001080
CP017639
Actinomycetota
Corynebacterium sp. NML98-0116 [CP017639]
1019635
1019563
-
Val
GAC
-
¡û
>C173001486
CP019705
Actinomycetota
Corynebacterium ammoniagenes KCCM 40472 [CP019705]
1421865
1421937
+
Val
GAC
-
¡û
>C173001487
CP019705
Actinomycetota
Corynebacterium ammoniagenes KCCM 40472 [CP019705]
1422213
1422285
+
Val
GAC
-
¡û
>C173001549
CP019963
Actinomycetota
Corynebacterium stationis LMG 21670 [CP019963]
1135749
1135823
+
Val
GAC
-
¡û
>C173001550
CP019963
Actinomycetota
Corynebacterium stationis LMG 21670 [CP019963]
1136065
1136137
+
Val
GAC
-
¡û
>WENV180035017
FTKT01000143
[FTKT] metagenome; soil
48
120
+
Val
GAC
[ENA]
¢þ
>WENV180035018
FTKT01000143
[FTKT] metagenome; soil
197
270
+
Val
GAC
[ENA]
¢þ
>WENV180035376
FTKT01451659
[FTKT] metagenome; soil
17336
17408
+
Val
GAC
[ENA]
¢þ
>WENV180035377
FTKT01451659
[FTKT] metagenome; soil
17485
17557
+
Val
GAC
[ENA]
¢þ
>C183003847
LS483404
Actinomycetota
Corynebacterium renale NCTC11140 [LS483404]
1663368
1663440
+
Val
GAC
-
¡û
>C183003848
LS483404
Actinomycetota
Corynebacterium renale NCTC11140 [LS483404]
1663674
1663746
+
Val
GAC
-
¡û
>C183003886
LS483464
Actinomycetota
Corynebacterium renale NCTC7448 [LS483464]
2133292
2133364
+
Val
GAC
-
¡û
>C183003887
LS483464
Actinomycetota
Corynebacterium renale NCTC7448 [LS483464]
2133598
2133670
+
Val
GAC
-
¡û
>C183004035
LT906467
Actinomycetota
Corynebacterium imitans NCTC13015 [LT906467]
1558804
1558876
+
Val
GAC
-
¡û
>C183004036
LT906467
Actinomycetota
Corynebacterium imitans NCTC13015 [LT906467]
1559124
1559196
+
Val
GAC
-
¡û
>C183004040
LT906473
Actinomycetota
Corynebacterium cystitidis NCTC11863 [LT906473]
984333
984261
-
Val
GAC
-
¡û
>C183004041
LT906473
Actinomycetota
Corynebacterium cystitidis NCTC11863 [LT906473]
984023
983951
-
Val
GAC
-
¡û
>W141818475
JQLN01000004
Actinomycetota
Kitasatospora mediocidica KCTC 9733 [JQLN]
692414
692486
+
Val
GAC
[ENA]
¡û
>W141818476
JQLN01000004
Actinomycetota
Kitasatospora mediocidica KCTC 9733 [JQLN]
692561
692633
+
Val
GAC
[ENA]
¡û
>W141818477
JQLN01000004
Actinomycetota
Kitasatospora mediocidica KCTC 9733 [JQLN]
692708
692780
+
Val
GAC
[ENA]
¡û
>W1930003845
FMSX01000022
Actinomycetota
Corynebacterium sp. MC3 [FMSX]
281486
281414
-
Val
GAC
[ENA]
¡û
>W1930003846
FMSX01000022
Actinomycetota
Corynebacterium sp. MC3 [FMSX]
281198
281126
-
Val
GAC
[ENA]
¡û
>W1930006424
FTLL01000028
Actinomycetota
Corynebacterium urinipleomorphum Marseille-P2799 [FTLL]
412256
412328
+
Val
GAC
[ENA]
¡û
>W1930006425
FTLL01000028
Actinomycetota
Corynebacterium urinipleomorphum Marseille-P2799 [FTLL]
412600
412672
+
Val
GAC
[ENA]
¡û
>W1930008479
FWYQ01000050
Actinomycetota
Corynebacterium fournieri Marseille-P2948 [FWYQ]
70417
70489
+
Val
GAC
[ENA]
¡û
>W1930008480
FWYQ01000050
Actinomycetota
Corynebacterium fournieri Marseille-P2948 [FWYQ]
70729
70801
+
Val
GAC
[ENA]
¡û
>W1930030744
NSGK01000016
Actinomycetota
Corynebacterium sp. NML 150383 [NSGK]
30201
30129
-
Val
GAC
[ENA]
¡û
>W1930030745
NSGK01000016
Actinomycetota
Corynebacterium sp. NML 150383 [NSGK]
29888
29816
-
Val
GAC
[ENA]
¡û
>W1930030746
NSGL01000001
Actinomycetota
Corynebacterium sp. NML 120412 [NSGL]
509564
509636
+
Val
GAC
[ENA]
¡û
>W1930030747
NSGL01000001
Actinomycetota
Corynebacterium sp. NML 120412 [NSGL]
509877
509949
+
Val
GAC
[ENA]
¡û
>W1930030750
NSGM01000001
Actinomycetota
Corynebacterium hadale NML00-0156 [NSGM]
12021
12093
+
Val
GAC
[ENA]
¡û
>W1930030751
NSGM01000001
Actinomycetota
Corynebacterium hadale NML00-0156 [NSGM]
12334
12406
+
Val
GAC
[ENA]
¡û
>W1930030752
NSGN01000001
Actinomycetota
Corynebacterium hadale NML99-0020 [NSGN]
206818
206890
+
Val
GAC
[ENA]
¡û
>W1930030753
NSGN01000001
Actinomycetota
Corynebacterium hadale NML99-0020 [NSGN]
207131
207203
+
Val
GAC
[ENA]
¡û
>W1930030754
NSGO01000001
Actinomycetota
Corynebacterium hadale NML93-0607 [NSGO]
30330
30402
+
Val
GAC
[ENA]
¡û
>W1930030755
NSGO01000001
Actinomycetota
Corynebacterium hadale NML93-0607 [NSGO]
30643
30715
+
Val
GAC
[ENA]
¡û
>W1930030759
NSGP01000016
Actinomycetota
Corynebacterium hadale NML92-0415 [NSGP]
30234
30162
-
Val
GAC
[ENA]
¡û
>W1930030760
NSGP01000016
Actinomycetota
Corynebacterium hadale NML92-0415 [NSGP]
29921
29849
-
Val
GAC
[ENA]
¡û
>W1930035920
PNHG01000009
Actinomycetota
Corynebacterium tuscaniense UMB0792 [PNHG]
73678
73606
-
Val
GAC
[ENA]
¡û
>W1930035921
PNHG01000009
Actinomycetota
Corynebacterium tuscaniense UMB0792 [PNHG]
73324
73252
-
Val
GAC
[ENA]
¡û
>W1911075206
NMUK01000099
Actinomycetota
Amycolatopsis sp. KNN50.9b [NMUK]
27705
27778
+
Val
GAC
[ENA]
¡û
>W1810254771
PQHW01000035
Actinomycetota
Amycolatopsis thermalba NRRL B-24845 [PQHW]
27830
27903
+
Val
GAC
[ENA]
¡û
>W1810254829
PQHX01000038
Actinomycetota
Amycolatopsis thermalba 50.9b [PQHX]
27830
27903
+
Val
GAC
[ENA]
¡û
>W1810254892
PQHY01000095
Actinomycetota
Amycolatopsis ruanii 49.3e [PQHY]
13249
13322
+
Val
GAC
[ENA]
¡û
>W1830000946
PDJF01000001
Actinomycetota
Corynebacterium renale DSM 20688 [PDJF]
1790545
1790473
-
Val
GAC
[ENA]
¡û
>W1830000947
PDJF01000001
Actinomycetota
Corynebacterium renale DSM 20688 [PDJF]
1790239
1790167
-
Val
GAC
[ENA]
¡û
>W1830003709
PKHP01000017
Actinomycetota
Corynebacterium coyleae UMB0989 [PKHP]
638
710
+
Val
GAC
[ENA]
¡û
>W1830003710
PKHP01000017
Actinomycetota
Corynebacterium coyleae UMB0989 [PKHP]
951
1023
+
Val
GAC
[ENA]
¡û
>W1830003711
PKHQ01000002
Actinomycetota
Corynebacterium coyleae UMB0147 [PKHQ]
119244
119172
-
Val
GAC
[ENA]
¡û
>W1830003712
PKHQ01000002
Actinomycetota
Corynebacterium coyleae UMB0147 [PKHQ]
118931
118859
-
Val
GAC
[ENA]
¡û
>W1830006433
PUGE01000003
Actinomycetota
Corynebacterium sp. J010B-136 [PUGE]
291452
291526
+
Val
GAC
[ENA]
¡û
>W1830006434
PUGE01000003
Actinomycetota
Corynebacterium sp. J010B-136 [PUGE]
291768
291840
+
Val
GAC
[ENA]
¡û
>C153000605
CP009211
Actinomycetota
Corynebacterium imitans DSM 44264 [CP009211]
1476843
1476915
+
Val
GAC
[Ensembl]
¡û
>C153000606
CP009211
Actinomycetota
Corynebacterium imitans DSM 44264 [CP009211]
1477163
1477235
+
Val
GAC
[Ensembl]
¡û
>C153000607
CP009215
Actinomycetota
Corynebacterium ureicelerivorans IMMIB RIV-2301 [CP009215]
1349146
1349218
+
Val
GAC
[Ensembl]
¡û
>C153000608
CP009215
Actinomycetota
Corynebacterium ureicelerivorans IMMIB RIV-2301 [CP009215]
1349460
1349532
+
Val
GAC
[Ensembl]
¡û
>C153000129
CP004350
Actinomycetota
Corynebacterium casei LMG S-19264 [CP004350]
1438229
1438303
+
Val
GAC
[Ensembl]
¡û
>C153000130
CP004350
Actinomycetota
Corynebacterium casei LMG S-19264 [CP004350]
1438545
1438617
+
Val
GAC
[Ensembl]
¡û
>W1530032026
LDYD01000008
Actinomycetota
Corynebacterium pilosum CIP103422 [LDYD]
271323
271249
-
Val
GAC
[ENA]
¡û
>W1530032027
LDYD01000008
Actinomycetota
Corynebacterium pilosum CIP103422 [LDYD]
271021
270949
-
Val
GAC
[ENA]
¡û
>W1530032029
LDYE01000003
Actinomycetota
Corynebacterium renale CIP 52.96 [LDYE]
96155
96227
+
Val
GAC
[ENA]
¡û
>W1530032030
LDYE01000003
Actinomycetota
Corynebacterium renale CIP 52.96 [LDYE]
96461
96533
+
Val
GAC
[ENA]
¡û
>C163001028
CP014279
Actinomycetota
Corynebacterium stationis ATCC 6872 [CP014279]
1313072
1313146
+
Val
GAC
[Ensembl]
¡û
>C163001029
CP014279
Actinomycetota
Corynebacterium stationis ATCC 6872 [CP014279]
1313388
1313460
+
Val
GAC
[Ensembl]
¡û
>W123002886
CAFW01000015
Actinomycetota
Corynebacterium casei UCMA 3821 [CAFW]
232523
232597
+
Val
GAC
[ENA]
¡û
>W1630017734
LSTQ01000022
Actinomycetota
Corynebacterium stationis [LSTQ]
232974
232900
-
Val
GAC
[ENA]
¡û
>W1630017735
LSTQ01000022
Actinomycetota
Corynebacterium stationis [LSTQ]
232658
232586
-
Val
GAC
[ENA]
¡û
>W1630019795
LXGG01000001
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
180766
180838
+
Val
GAC
[ENA]
¡û
>W1630019796
LXGG01000001
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
181081
181153
+
Val
GAC
[ENA]
¡û
>W1730009017
FNRU01000002
Actinomycetota
Corynebacterium coyleae [FNRU]
2508272
2508344
+
Val
GAC
[ENA]
¡û
>W1730009018
FNRU01000002
Actinomycetota
Corynebacterium coyleae [FNRU]
2508585
2508657
+
Val
GAC
[ENA]
¡û
>W1730009499
FOGQ01000001
Actinomycetota
Corynebacterium cystitidis DSM 20524 [FOGQ]
294739
294667
-
Val
GAC
[ENA]
¡û
>W1730009500
FOGQ01000001
Actinomycetota
Corynebacterium cystitidis DSM 20524 [FOGQ]
294429
294357
-
Val
GAC
[ENA]
¡û
>W1730010647
FTMH01000004
Actinomycetota
Corynebacterium afermentans [FTMH]
559
631
+
Val
GAC
[ENA]
¡û
>W1730010648
FTMH01000004
Actinomycetota
Corynebacterium afermentans [FTMH]
874
946
+
Val
GAC
[ENA]
¡û
>W1730010681
FTOF01000003
Actinomycetota
Corynebacterium appendicis CIP 107643 [FTOF]
305205
305131
-
Val
GAC
[ENA]
¡û
>W1730010682
FTOF01000003
Actinomycetota
Corynebacterium appendicis CIP 107643 [FTOF]
304895
304821
-
Val
GAC
[ENA]
¡û
>W1730020414
LSTQ01000022
Actinomycetota
Corynebacterium stationis [LSTQ]
232974
232900
-
Val
GAC
[ENA]
¡û
>W1730020415
LSTQ01000022
Actinomycetota
Corynebacterium stationis [LSTQ]
232658
232586
-
Val
GAC
[ENA]
¡û
>W1730020649
LTGO01000042
Actinomycetota
Corynebacterium sp. HMSC067D03 [LTGO]
1512
1440
-
Val
GAC
[ENA]
¡û
>W1730020650
LTGO01000042
Actinomycetota
Corynebacterium sp. HMSC067D03 [LTGO]
1199
1127
-
Val
GAC
[ENA]
¡û
>W1730020676
LTHX01000039
Actinomycetota
Corynebacterium sp. HMSC055D05 [LTHX]
524
596
+
Val
GAC
[ENA]
¡û
>W1730020677
LTHX01000039
Actinomycetota
Corynebacterium sp. HMSC055D05 [LTHX]
837
909
+
Val
GAC
[ENA]
¡û
>W1730020839
LTNW01000074
Actinomycetota
Corynebacterium sp. HMSC034A01 [LTNW]
163
235
+
Val
GAC
[ENA]
¡û
>W1730020860
LTOW01000020
Actinomycetota
Corynebacterium sp. HMSC070H05 [LTOW]
1
73
+
Val
GAC
[ENA]
¡û
>W1730020861
LTOW01000077
Actinomycetota
Corynebacterium sp. HMSC070H05 [LTOW]
268131
268059
-
Val
GAC
[ENA]
¡û
>W1730020934
LTRH01000030
Actinomycetota
Corynebacterium sp. HMSC036E10 [LTRH]
54
126
+
Val
GAC
[ENA]
¡û
>W1730020935
LTRH01000030
Actinomycetota
Corynebacterium sp. HMSC036E10 [LTRH]
368
440
+
Val
GAC
[ENA]
¡û
>W1730020954
LTRY01000031
Actinomycetota
Corynebacterium sp. HMSC034E11 [LTRY]
137678
137750
+
Val
GAC
[ENA]
¡û
>W1730020955
LTRY01000031
Actinomycetota
Corynebacterium sp. HMSC034E11 [LTRY]
137991
138063
+
Val
GAC
[ENA]
¡û
>W1730020958
LTSB01000055
Actinomycetota
Corynebacterium sp. HMSC034B08 [LTSB]
3517
3589
+
Val
GAC
[ENA]
¡û
>W1730020970
LTSO01000025
Actinomycetota
Corynebacterium sp. HMSC075D04 [LTSO]
10168
10096
-
Val
GAC
[ENA]
¡û
>W1730020971
LTSO01000025
Actinomycetota
Corynebacterium sp. HMSC075D04 [LTSO]
9855
9783
-
Val
GAC
[ENA]
¡û
>W1730021023
LTUC01000069
Actinomycetota
Corynebacterium sp. HMSC071B10 [LTUC]
37551
37479
-
Val
GAC
[ENA]
¡û
>W1730021208
LTZO01000055
Actinomycetota
Corynebacterium sp. HMSC11D10 [LTZO]
42836
42764
-
Val
GAC
[ENA]
¡û
>W1730021209
LTZO01000055
Actinomycetota
Corynebacterium sp. HMSC11D10 [LTZO]
42523
42451
-
Val
GAC
[ENA]
¡û
>W1730023081
LWNT01000089
Actinomycetota
Corynebacterium sp. HMSC08F01 [LWNT]
161
233
+
Val
GAC
[ENA]
¡û
>W1730023082
LWNU01000042
Actinomycetota
Corynebacterium sp. HMSC08D02 [LWNU]
241565
241493
-
Val
GAC
[ENA]
¡û
>W1730023083
LWNU01000042
Actinomycetota
Corynebacterium sp. HMSC08D02 [LWNU]
241367
241295
-
Val
GAC
[ENA]
¡û
>W1730023098
LWOH01000028
Actinomycetota
Corynebacterium sp. HMSC05H05 [LWOH]
147892
147820
-
Val
GAC
[ENA]
¡û
>W1730023099
LWOH01000028
Actinomycetota
Corynebacterium sp. HMSC05H05 [LWOH]
147577
147505
-
Val
GAC
[ENA]
¡û
>W1730023102
LWOM01000047
Actinomycetota
Corynebacterium sp. HMSC05C01 [LWOM]
195105
195033
-
Val
GAC
[ENA]
¡û
>W1730023352
LXGG01000001
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
180766
180838
+
Val
GAC
[ENA]
¡û
>W1730023353
LXGG01000001
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
181081
181153
+
Val
GAC
[ENA]
¡û
>W1730030478
MLAL01000016
Actinomycetota
Corynebacterium sp. NML130628 [MLAL]
257525
257597
+
Val
GAC
[ENA]
¡û
>W1730030479
MLAL01000016
Actinomycetota
Corynebacterium sp. NML130628 [MLAL]
257813
257885
+
Val
GAC
[ENA]
¡û
>W1730030519
MLCQ01000017
Actinomycetota
Corynebacterium sp. NML140438 [MLCQ]
184894
184966
+
Val
GAC
[ENA]
¡û
>W1730030520
MLCQ01000017
Actinomycetota
Corynebacterium sp. NML140438 [MLCQ]
185181
185253
+
Val
GAC
[ENA]
¡û
>W1730030521
MLCR01000005
Actinomycetota
Corynebacterium sp. NML120713 [MLCR]
286767
286695
-
Val
GAC
[ENA]
¡û
>W1730030522
MLCR01000005
Actinomycetota
Corynebacterium sp. NML120713 [MLCR]
286479
286407
-
Val
GAC
[ENA]
¡û
>W1730030632
MLJM01000047
Actinomycetota
Corynebacterium sp. HMSC074A01 [MLJM]
19484
19412
-
Val
GAC
[ENA]
¡û
>W133003185
ARAV01000001
Actinomycetota
Corynebacterium lubricantis DSM 45231 [ARAV]
236242
236316
+
Val
GAC
[ENA]
¡û
>W133003211
ARBM01000001
Actinomycetota
Corynebacterium caspium DSM 44850 [ARBM]
213147
213075
-
Val
GAC
[ENA]
¡û
>W133003328
AREP01000017
Actinomycetota
Corynebacterium pilosum DSM 20521 [AREP]
14309
14383
+
Val
GAC
[ENA]
¡û
>W133003329
AREP01000017
Actinomycetota
Corynebacterium pilosum DSM 20521 [AREP]
14612
14684
+
Val
GAC
[ENA]
¡û
>W133005272
CAVS020000025
Actinomycetota
Corynebacterium ihumii GD7 [CAVS]
65380
65308
-
Val
GAC
[ENA]
¡û
>W133005273
CAVS020000025
Actinomycetota
Corynebacterium ihumii GD7 [CAVS]
65065
64993
-
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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