This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.401701 (26 seq.)
>W1710786262
LJIV01000002
Bacillota
Leuconostoc lactis [LJIV]
53398
53472
+
Gln
TTG
[ENA]
¡û
>W1710786288
LJIV01000012
Bacillota
Leuconostoc lactis [LJIV]
72834
72760
-
Gln
TTG
[ENA]
¡û
>W1711627396
MPLL01000005
Bacillota
Leuconostoc lactis [MPLL]
75931
75857
-
Gln
TTG
[ENA]
¡û
>W1711627430
MPLL01000025
Bacillota
Leuconostoc lactis [MPLL]
19915
19841
-
Gln
TTG
[ENA]
¡û
>W1711627489
MPLN01000004
Bacillota
Leuconostoc lactis [MPLN]
75931
75857
-
Gln
TTG
[ENA]
¡û
>W1711627525
MPLN01000026
Bacillota
Leuconostoc lactis [MPLN]
19916
19842
-
Gln
TTG
[ENA]
¡û
>C171047478
CP016329
Bacillota
Leuconostoc garlicum KFRI01 [CP016329]
675361
675435
+
Gln
TTG
-
¡û
>C171047499
CP016329
Bacillota
Leuconostoc garlicum KFRI01 [CP016329]
385078
385004
-
Gln
TTG
-
¡û
>WENV182610686
OJJW01000109
[OJJW] metagenome; faeces
20942
20868
-
Gln
TTG
[ENA]
¢þ
>W141695496
JMEA01000004
Bacillota
Leuconostoc lactis [JMEA]
53328
53403
+
Gln
TTG
[ENA]
¡û
>W141695514
JMEA01000010
Bacillota
Leuconostoc lactis [JMEA]
51517
51591
+
Gln
TTG
[ENA]
¡û
>W1911177173
NQLF01000001
Bacillota
Leuconostoc lactis CCK940 [NQLF]
126014
126088
+
Gln
TTG
[ENA]
¡û
>W1911177227
NQLF01000001
Bacillota
Leuconostoc lactis CCK940 [NQLF]
1566544
1566470
-
Gln
TTG
[ENA]
¡û
>W1511469019
JVUV01000030
Bacillota
Leuconostoc citreum 1300_LCIT [JVUV]
75
1
-
Gln
TTG
[ENA]
¡û
>W1511469021
JVUV01000031
Bacillota
Leuconostoc citreum 1300_LCIT [JVUV]
157
232
+
Gln
TTG
[ENA]
¡û
>W1511469031
JVUV01000036
Bacillota
Leuconostoc citreum 1300_LCIT [JVUV]
151345
151271
-
Gln
TTG
[ENA]
¡û
>W11137101
AEGQ01000003
Bacillota
Leuconostoc lactis KCTC 3773 [AEGQ]
973
899
-
Gln
TTG
[ENA]
¡û
>W11137114
AEGQ01000037
Bacillota
Leuconostoc lactis KCTC 3773 [AEGQ]
3202
3276
+
Gln
TTG
[ENA]
¡û
>W11142031
AEOR01000078
Bacillota
Leuconostoc lactis KCTC 3528 [AEOR]
7107
7033
-
Gln
TTG
[ENA]
¡û
>W11142063
AEOR01001066
Bacillota
Leuconostoc lactis KCTC 3528 [AEOR]
390
315
-
Gln
TTG
[ENA]
¡û
>W11184725
BACM01000988
Bacillota
Leuconostoc carnosum KCTC 3525 [BACM]
251
177
-
Gln
TTG
[ENA]
¡û
>W11184750
BACM01002166
Bacillota
Leuconostoc carnosum KCTC 3525 [BACM]
3226
3300
+
Gln
TTG
[ENA]
¡û
>C161100101
CP016598
Bacillota
Leuconostoc lactis WiKim40 [CP016598]
1002977
1003051
+
Gln
TTG
[Ensembl]
¡û
>C161100118
CP016598
Bacillota
Leuconostoc lactis WiKim40 [CP016598]
705210
705135
-
Gln
TTG
[Ensembl]
¡û
>W1610650117
LJIV01000002
Bacillota
Leuconostoc lactis [LJIV]
53398
53472
+
Gln
TTG
[ENA]
¡û
>W1610650143
LJIV01000012
Bacillota
Leuconostoc lactis [LJIV]
72834
72760
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK