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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.401834 (98 seq.)
>W1710811779
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
207795
207867
+
Gln
TTG
[ENA]
¡û
>W1710872057
LMLR01000015
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
155693
155765
+
Gln
TTG
[ENA]
¡û
>W1710875375
LMOI01000019
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
38533
38461
-
Gln
TTG
[ENA]
¡û
>W1710875517
LMOL01000007
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
147400
147472
+
Gln
TTG
[ENA]
¡û
>W1710876310
LMPC01000026
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
96124
96052
-
Gln
TTG
[ENA]
¡û
>W1710880035
LMSB01000023
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
114071
114143
+
Gln
TTG
[ENA]
¡û
>W1710880328
LMSG01000021
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
46503
46575
+
Gln
TTG
[ENA]
¡û
>W1710880384
LMSH01000004
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
152986
153058
+
Gln
TTG
[ENA]
¡û
>W1710916091
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
623297
623369
+
Gln
TTG
[ENA]
¡û
>W1710916198
LNUV01000003
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
218136
218208
+
Gln
TTG
[ENA]
¡û
>W1710995736
LQAP01000005
Actinomycetota
Arthrobacter sp. B6 [LQAP]
62994
62922
-
Gln
TTG
[ENA]
¡û
>W131172210
ARGT01000021
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
60090
60018
-
Gln
TTG
[ENA]
¡û
>W1711184055
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
1585567
1585639
+
Gln
TTG
[ENA]
¡û
>W131237727
AUPJ01000361
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
15104
15032
-
Gln
TTG
[ENA]
¡û
>W1711724063
MTPV01000018
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
46324
46252
-
Gln
TTG
[ENA]
¡û
>W1711768849
MVDG01000089
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
113560
113488
-
Gln
TTG
[ENA]
¡û
>C171040594
CP015732
Actinomycetota
Arthrobacter sp. U41 [CP015732]
2488520
2488592
+
Gln
TTG
-
¡û
>C000053
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
1435208
1435279
+
Gln
TTG
[Ensembl]
¡û
>C000993
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
1326164
1326235
+
Gln
TTG
[Ensembl]
¡û
>WENV180019662
FTCF01000433
[FTCF] metagenome; soil
9667
9739
+
Gln
TTG
[ENA]
¢þ
>WENV180025577
FTIP01081677
[FTIP] metagenome; soil
174
102
-
Gln
TTG
[ENA]
¢þ
>WENV180025624
FTIP01165677
[FTIP] metagenome; soil
12
84
+
Gln
TTG
[ENA]
¢þ
>WENV180029888
FTJL01013025
[FTJL] metagenome; soil
271
343
+
Gln
TTG
[ENA]
¢þ
>WENV180040291
LLBY010636768
[LLBY] soil metagenome; soil from tomato rhizosphere
641
713
+
Gln
TTG
[ENA]
¢þ
>W141065995
AQRI01000013
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
576565
576637
+
Gln
TTG
[ENA]
¡û
>WENV180695342
OCZS013352032
[OCZS] soil metagenome; soil
159
87
-
Gln
TTG
[ENA]
¢þ
>W141106066
AVPD01000004
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
137997
137925
-
Gln
TTG
[ENA]
¡û
>WENV181191658
OEPS010154633
[OEPS] soil metagenome; soil
378
306
-
Gln
TTG
[ENA]
¢þ
>W141213524
AZSB01000326
Actinomycetota
Arthrobacter sp. I3 [AZSB]
3524
3452
-
Gln
TTG
[ENA]
¡û
>W141213594
AZSC01000267
Actinomycetota
Arthrobacter sp. H5 [AZSC]
24044
23972
-
Gln
TTG
[ENA]
¡û
>W141216724
AZVC01000004
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
51531
51459
-
Gln
TTG
[ENA]
¡û
>W141217144
AZVJ01000006
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
55011
55083
+
Gln
TTG
[ENA]
¡û
>W141278863
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
3884062
3884134
+
Gln
TTG
[ENA]
¡û
>C181000303
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
1088123
1088195
+
Gln
TTG
-
¡û
>C181064958
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
1536177
1536249
+
Gln
TTG
-
¡û
>C181134207
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
1304822
1304894
+
Gln
TTG
-
¡û
>C191164637
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
3715484
3715412
-
Gln
TTG
-
¡û
>C191174045
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
1511578
1511650
+
Gln
TTG
-
¡û
>C191188271
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
1854157
1854229
+
Gln
TTG
-
¡û
>W141565202
JIBJ01000006
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
129223
129151
-
Gln
TTG
[ENA]
¡û
>W141702009
JMLE01000007
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
21321
21249
-
Gln
TTG
[ENA]
¡û
>W09102035
AAHG01000003
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
270047
269975
-
Gln
TTG
[ENA]
¡û
>W1910181581
BJMD01000012
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
159954
159882
-
Gln
TTG
[ENA]
¡û
>W1911532744
OIVI01000308
Actinomycetota
Arthrobacter alpinus [OIVI]
85305
85233
-
Gln
TTG
[ENA]
¡û
>W1911566812
PCPC01000019
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
40600
40528
-
Gln
TTG
[ENA]
¡û
>W1911567580
PCPR01000017
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
59278
59206
-
Gln
TTG
[ENA]
¡û
>W1911798262
QYLP01000097
Actinomycetota
Arthrobacter celericrescens NEAU-SA2 [QYLP]
61538
61466
-
Gln
TTG
[ENA]
¡û
>W1810167237
PJII01000002
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
278236
278164
-
Gln
TTG
[ENA]
¡û
>W1810167311
PJIJ01000003
Actinomycetota
Arthrobacter sp. ZGTC212 [PJIJ]
408418
408490
+
Gln
TTG
[ENA]
¡û
>W1810167335
PJIK01000002
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
153645
153717
+
Gln
TTG
[ENA]
¡û
>W1810167381
PJIL01000002
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
365204
365132
-
Gln
TTG
[ENA]
¡û
>W1810167744
PJIS01000003
Actinomycetota
Arthrobacter sp. 9E06 [PJIS]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167795
PJIT01000003
Actinomycetota
Arthrobacter sp. 9E18 [PJIT]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167846
PJIU01000003
Actinomycetota
Arthrobacter sp. 9E16 [PJIU]
435567
435639
+
Gln
TTG
[ENA]
¡û
>W1810167872
PJIV01000003
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
215012
214940
-
Gln
TTG
[ENA]
¡û
>W1810167919
PJIW01000004
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
184985
185057
+
Gln
TTG
[ENA]
¡û
>W1810167993
PJIX01000003
Actinomycetota
Arthrobacter sp. 08Y14 [PJIX]
428852
428924
+
Gln
TTG
[ENA]
¡û
>W1810171980
PJMB01000008
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
57962
57890
-
Gln
TTG
[ENA]
¡û
>W1810171988
PJMC01000001
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
150725
150797
+
Gln
TTG
[ENA]
¡û
>W1810424169
PYUI01000004
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
175760
175832
+
Gln
TTG
[ENA]
¡û
>W1810474953
QAIQ01000099
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
4067
3995
-
Gln
TTG
[ENA]
¡û
>W1810695560
QLNP01000089
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
15529
15601
+
Gln
TTG
[ENA]
¡û
>W1810707025
QMKP01000001
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
119487
119559
+
Gln
TTG
[ENA]
¡û
>W1510018501
BBUD01000265
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
931
859
-
Gln
TTG
[ENA]
¡û
>W1510089408
CECE01000007
Actinomycetota
Arthrobacter koreensis 5J12A [CECE]
297204
297132
-
Gln
TTG
[ENA]
¡û
>W1510641744
CVLG01000001
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
1850977
1851049
+
Gln
TTG
[ENA]
¡û
>W1511523713
JYCN01000012
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
60019
60091
+
Gln
TTG
[ENA]
¡û
>W1511685696
LFQH01000052
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
27282
27354
+
Gln
TTG
[ENA]
¡û
>C161001343
AP014719
Actinomycetota
Arthrobacter sp. Hiyo8 [AP014719]
1184237
1184165
-
Gln
TTG
-
¡û
>C161060753
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
920867
920795
-
Gln
TTG
[Ensembl]
¡û
>W121114209
ALPM01000075
Actinomycetota
Arthrobacter sp. TB 23 [ALPM]
43756
43684
-
Gln
TTG
[ENA]
¡û
>W121086813
AKKK01000025
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
13107
13179
+
Gln
TTG
[ENA]
¡û
>W121123798
BAEG01000043
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
14207
14279
+
Gln
TTG
[ENA]
¡û
>W1610050324
BBFS01000056
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
25883
25811
-
Gln
TTG
[ENA]
¡û
>W1610067303
BCQM01000003
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
287846
287918
+
Gln
TTG
[ENA]
¡û
>C131002302
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
1374663
1374735
+
Gln
TTG
[Ensembl]
¡û
>W1610675876
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
207795
207867
+
Gln
TTG
[ENA]
¡û
>W1610734403
LMLR01000015
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
155693
155765
+
Gln
TTG
[ENA]
¡û
>W1610737721
LMOI01000019
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
38533
38461
-
Gln
TTG
[ENA]
¡û
>W1610737863
LMOL01000007
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
147400
147472
+
Gln
TTG
[ENA]
¡û
>W1610738656
LMPC01000026
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
96124
96052
-
Gln
TTG
[ENA]
¡û
>W1610742381
LMSB01000023
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
114071
114143
+
Gln
TTG
[ENA]
¡û
>W1610742674
LMSG01000021
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
46503
46575
+
Gln
TTG
[ENA]
¡û
>W1610742730
LMSH01000004
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
152986
153058
+
Gln
TTG
[ENA]
¡û
>W1610774330
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
623297
623369
+
Gln
TTG
[ENA]
¡û
>W1610774437
LNUV01000003
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
218136
218208
+
Gln
TTG
[ENA]
¡û
>W1610850393
LQAP01000005
Actinomycetota
Arthrobacter sp. B6 [LQAP]
62994
62922
-
Gln
TTG
[ENA]
¡û
>W1610989937
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
1585567
1585639
+
Gln
TTG
[ENA]
¡û
>W1710046723
BBFS01000056
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
25883
25811
-
Gln
TTG
[ENA]
¡û
>W1710064676
BCQM01000003
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
287846
287918
+
Gln
TTG
[ENA]
¡û
>W1710508497
FMWE01000002
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
513243
513171
-
Gln
TTG
[ENA]
¡û
>W1710521056
FNGC01000001
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
177184
177256
+
Gln
TTG
[ENA]
¡û
>W1710521113
FNGD01000002
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
293204
293132
-
Gln
TTG
[ENA]
¡û
>W1710525660
FNJS01000005
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
44876
44804
-
Gln
TTG
[ENA]
¡û
>W1710528987
FNNR01000001
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
428966
429038
+
Gln
TTG
[ENA]
¡û
>W1710541437
FNYI01000002
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
222806
222734
-
Gln
TTG
[ENA]
¡û
>W1710577638
FPAY01000008
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
50616
50544
-
Gln
TTG
[ENA]
¡û
>W1710603508
FUZD01000004
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
318720
318648
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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