tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.402731 (57 seq.)
>W1710785729 LJIC01000107 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 24081 24155 + Gln TTG [ENA] ¡û
>W1711501152 MKRG01000102 Alphaproteobacteria Afipia sp. 62-7 [MKRG] 30731 30805 + Gln TTG [ENA] ¡û
>W1711502247 MKSM01000083 Alphaproteobacteria Nitrobacter sp. 62-23 [MKSM] 31292 31218 - Gln TTG [ENA] ¡û
>W1711504255 MKUJ01000012 Alphaproteobacteria Afipia sp. 64-13 [MKUJ] 4289 4215 - Gln TTG [ENA] ¡û
>W1711783526 MVOD01000019 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 806381 806307 - Gln TTG [ENA] ¡û
>W1711795358 MWPQ01000010 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 129817 129891 + Gln TTG [ENA] ¡û
>W131226871 AUES01000001 Alphaproteobacteria Bradyrhizobium sp. URHA0002 [AUES] 97532 97606 + Gln TTG [ENA] ¡û
>C014921 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 865255 865329 + Gln TTG [Ensembl] ¡û
>C015354 CP000115 Alphaproteobacteria Nitrobacter winogradskyi Nb-255 [CP000115] 718800 718874 + Gln TTG [Ensembl] ¡û
>C018945 CP000283 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [CP000283] 4760534 4760460 - Gln TTG [Ensembl] ¡û
>C018982 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 1061293 1061367 + Gln TTG [Ensembl] ¡û
>C019052 CP000250 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [CP000250] 5041400 5041326 - Gln TTG [Ensembl] ¡û
>w013015 AAMY01000046 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 12552 12628 + Gln TTG [ENA] ¡û
>W141007517 AGWY01000017 Alphaproteobacteria Afipia clevelandensis ATCC 49720 [AGWY] 42894 42968 + Gln TTG [ENA] ¡û
>w001298 AAAF01000013 Alphaproteobacteria Rhodopseudomonas palustris [AAAF] 65810 65886 + Gln TTG [ENA] ¡û
>WENV181167264 OEIU01016581 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 75 1 - Gln TTG [ENA] ¢þ
>WENV181306887 OFIN01017613 [OFIN] marine metagenome; sea ice 328 402 + Gln TTG [ENA] ¢þ
>W141194167 AYSU01000031 Alphaproteobacteria Rhodopseudomonas palustris JSC-3b [AYSU] 104062 104136 + Gln TTG [ENA] ¡û
>W141223313 BADD01000411 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 1982 1908 - Gln TTG [ENA] ¡û
>W141261728 CCAZ010000176 Alphaproteobacteria Afipia felis [CCAZ] 41501 41427 - Gln TTG [ENA] ¡û
>WENV183728029 PJTP01019635 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 389 463 + Gln TTG [ENA] ¢þ
>WENV183729200 PJTQ01010613 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1016 1090 + Gln TTG [ENA] ¢þ
>WENV183736612 PJUC01023139 [PJUC] soil metagenome; Soil enriched on filter paper 321 247 - Gln TTG [ENA] ¢þ
>WENV183740285 PJUF01001011 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 16 90 + Gln TTG [ENA] ¢þ
>WENV183745156 PJUL01003427 [PJUL] feces metagenome; Chicken feces enriched on filter paper 1031 957 - Gln TTG [ENA] ¢þ
>WENV170706187 LNAP01001572 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 23033 22959 - Gln TTG [ENA] ¢þ
>WENV170974886 MTKY01079729 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1075 1001 - Gln TTG [ENA] ¢þ
>C181041847 CP019966 Alphaproteobacteria Rhodopseudomonas palustris PS3 [CP019966] 1067542 1067616 + Gln TTG - ¡û
>C181041895 CP019967 Alphaproteobacteria Rhodopseudomonas palustris YSC3 [CP019967] 1073696 1073770 + Gln TTG - ¡û
>W09103009 AAIS01000002 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 92866 92792 - Gln TTG [ENA] ¡û
>W09103826 AAKZ01000007 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [AAKZ] 906 832 - Gln TTG [ENA] ¡û
>W09103838 AAKZ01000012 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [AAKZ] 208477 208403 - Gln TTG [ENA] ¡û
>W09104360 AALQ01000002 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [AALQ] 1212765 1212691 - Gln TTG [ENA] ¡û
>W09107610 ABJR01000008 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 50432 50506 + Gln TTG [ENA] ¡û
>W1910182828 BJNF01000021 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 9152 9078 - Gln TTG [ENA] ¡û
>W1910568891 JHAA01000004 Alphaproteobacteria Rhodopseudomonas palustris PSBS [JHAA] 140059 139985 - Gln TTG [ENA] ¡û
>W1911219142 NRSI01000003 Alphaproteobacteria Rhodopseudomonas palustris DSM 126 [NRSI] 333197 333123 - Gln TTG [ENA] ¡û
>W1911760582 QWVU01000048 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 37505 37579 + Gln TTG [ENA] ¡û
>W1911809199 QYYC01000051 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 65213 65287 + Gln TTG [ENA] ¡û
>W1911809220 QYYD01000010 Alphaproteobacteria Rhodopseudomonas palustris 2.1.18 [QYYD] 149901 149827 - Gln TTG [ENA] ¡û
>W1810672313 QJTI01000010 Alphaproteobacteria Rhodopseudomonas faecalis JCM 11668 [QJTI] 16602 16676 + Gln TTG [ENA] ¡û
>W1810679457 QKQS01000026 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 64944 65018 + Gln TTG [ENA] ¡û
>W1810784359 QRAQ01000001 Alphaproteobacteria Tardiphaga sp. CF115 [QRAQ] 2172631 2172705 + Gln TTG [ENA] ¡û
>W1810787513 QRDT01000013 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 69028 69102 + Gln TTG [ENA] ¡û
>W1810884410 QUMP01000013 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 69028 69102 + Gln TTG [ENA] ¡û
>W10112815 ADFI01000007 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 145038 144964 - Gln TTG [ENA] ¡û
>W10119578 ADVZ01000004 Alphaproteobacteria Afipia sp. 1NLS2 [ADVZ] 315370 315444 + Gln TTG [ENA] ¡û
>C10110743 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 1094029 1094103 + Gln TTG [Ensembl] ¡û
>W11116042 ADFI01000007 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 145038 144964 - Gln TTG [ENA] ¡û
>C11118742 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 1202607 1202681 + Gln TTG [Ensembl] ¡û
>W11125844 ADVZ01000004 Alphaproteobacteria Afipia sp. 1NLS2 [ADVZ] 315370 315444 + Gln TTG [ENA] ¡û
>W1511625927 LCZM01000046 Alphaproteobacteria Rhodopseudomonas palustris 42OL [LCZM] 33815 33741 - Gln TTG [ENA] ¡û
>W11168445 AFOF01000022 Alphaproteobacteria Bradyrhizobiaceae bacterium SG-6C [AFOF] 55180 55254 + Gln TTG [ENA] ¡û
>W1610649535 LJIC01000107 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 24081 24155 + Gln TTG [ENA] ¡û
>W1710536630 FNTI01000001 Alphaproteobacteria Bradyrhizobium lablabi [FNTI] 5578547 5578621 + Gln TTG [ENA] ¡û
>W1710548398 FODT01000001 Alphaproteobacteria Rhodopseudomonas pseudopalustris [FODT] 262929 262855 - Gln TTG [ENA] ¡û
>W1710568429 FOTP01000003 Alphaproteobacteria Bradyrhizobium sp. NFR13 [FOTP] 423167 423241 + Gln TTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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