tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.403723 (126 seq.)
>W131000357 AGEB01000008 Spirochaetota Treponema denticola US-Trep [AGEB] 134984 135057 + Glu TTC [ENA] ¡û
>W131003030 AHAB01000002 Spirochaetota Treponema denticola SP23 [AHAB] 301378 301451 + Glu TTC [ENA] ¡û
>W131003098 AHAC01000021 Spirochaetota Treponema denticola SP32 [AHAC] 242818 242745 - Glu TTC [ENA] ¡û
>W131003144 AHAD01000009 Spirochaetota Treponema denticola SP44 [AHAD] 393111 393184 + Glu TTC [ENA] ¡û
>W1711137379 LVBI01000024 Spirochaetota Spirochaetales bacterium Spiro_07 [LVBI] 15028 14955 - Glu TTC [ENA] ¡û
>W1711137404 LVBJ01000013 Spirochaetota Spirochaetales bacterium Spiro_08 [LVBJ] 65515 65590 + Glu TTC [ENA] ¡û
>W1711137445 LVBK01000008 Spirochaetota Spirochaetales bacterium Spiro_09 [LVBK] 23143 23214 + Glu TTC [ENA] ¡û
>W1711137485 LVBL01000008 Spirochaetota Spirochaetales bacterium Spiro_10 [LVBL] 32300 32226 - Glu TTC [ENA] ¡û
>W131205813 ATFC01000009 Spirochaetota Treponema vincentii F0403 [ATFC] 197147 197072 - Glu TTC [ENA] ¡û
>W131205890 ATFE01000006 Spirochaetota Treponema medium ATCC 700293 [ATFE] 2332 2258 - Glu TTC [ENA] ¡û
>W131205952 ATFF01000006 Spirochaetota Treponema maltophilum ATCC 51939 [ATFF] 779011 778936 - Glu TTC [ENA] ¡û
>W1711524558 MLPZ01000013 Spirochaetota Treponema sp. CETP13 [MLPZ] 64776 64703 - Glu TTC [ENA] ¡û
>C025470 AE017226 Spirochaetota Treponema denticola ATCC 35405 [AE017226] 1551533 1551604 + Glu TTC [Ensembl] ¡û
>WENV180001230 FLNX01000538 [FLNX] bioreactor metagenome; Moose rumen 7922 7849 - Glu TTC [ENA] ¢þ
>W141005318 AGDQ01000002 Spirochaetota Treponema denticola AL-2 [AGDQ] 186749 186676 - Glu TTC [ENA] ¡û
>W141005388 AGDR01000038 Spirochaetota Treponema denticola ASLM [AGDR] 135040 135113 + Glu TTC [ENA] ¡û
>W141005433 AGDS01000016 Spirochaetota Treponema denticola ATCC 33520 [AGDS] 32909 32836 - Glu TTC [ENA] ¡û
>W141005478 AGDT01000020 Spirochaetota Treponema denticola ATCC 33521 [AGDT] 18943 18870 - Glu TTC [ENA] ¡û
>W141005485 AGDU01000001 Spirochaetota Treponema denticola ATCC 35404 [AGDU] 326780 326853 + Glu TTC [ENA] ¡û
>W141005528 AGDV01000001 Spirochaetota Treponema denticola H-22 [AGDV] 336735 336808 + Glu TTC [ENA] ¡û
>W141005606 AGDW01000022 Spirochaetota Treponema denticola H1-T [AGDW] 60380 60307 - Glu TTC [ENA] ¡û
>W141005647 AGDX01000013 Spirochaetota Treponema denticola MYR-T [AGDX] 52762 52689 - Glu TTC [ENA] ¡û
>W141005696 AGDY01000011 Spirochaetota Treponema denticola OTK [AGDY] 74537 74610 + Glu TTC [ENA] ¡û
>W141005729 AGDZ01000028 Spirochaetota Treponema denticola SP33 [AGDZ] 262615 262688 + Glu TTC [ENA] ¡û
>W141005771 AGEA01000017 Spirochaetota Treponema denticola SP37 [AGEA] 69749 69822 + Glu TTC [ENA] ¡û
>WENV180548401 OCIW01013169 [OCIW] human oral metagenome; human oral 92 166 + Glu TTC [ENA] ¢þ
>W141055885 AOTM01000021 Spirochaetota Treponema pedis str. T M1 [AOTM] 24693 24765 + Glu TTC [ENA] ¡û
>W141055930 AOTN01000073 Spirochaetota Treponema pedis str. B 683 [AOTN] 1625 1697 + Glu TTC [ENA] ¡û
>W141055997 AOTO01000602 Spirochaetota Treponema pedis isoM1111 [AOTO] 1583 1511 - Glu TTC [ENA] ¡û
>W141056016 AOTP01000044 Spirochaetota Treponema pedis isoE1186 [AOTP] 34270 34198 - Glu TTC [ENA] ¡û
>W141056062 AOTQ01000062 Spirochaetota Treponema pedis isoM1220 [AOTQ] 8057 8129 + Glu TTC [ENA] ¡û
>W141056102 AOTR01000001 Spirochaetota Treponema pedis isoM1224 [AOTR] 12161 12233 + Glu TTC [ENA] ¡û
>W141064684 AQCF01000033 Spirochaetota Treponema phagedenis 4A [AQCF] 26358 26285 - Glu TTC [ENA] ¡û
>WENV180708648 ODFJ01004188 [ODFJ] human metagenome; G_DNA_Tongue dorsum 5442 5369 - Glu TTC [ENA] ¢þ
>WENV180721987 ODGL01044589 [ODGL] human metagenome; G_DNA_Subgingival plaque 310 383 + Glu TTC [ENA] ¢þ
>WENV180723007 ODGM01118480 [ODGM] human metagenome; G_DNA_Palatine Tonsils 199 126 - Glu TTC [ENA] ¢þ
>WENV180727323 ODGU01004294 [ODGU] human metagenome; G_DNA_Supragingival plaque 3299 3372 + Glu TTC [ENA] ¢þ
>WENV180727713 ODGU01010538 [ODGU] human metagenome; G_DNA_Supragingival plaque 2100 2027 - Glu TTC [ENA] ¢þ
>WENV180727722 ODGU01010701 [ODGU] human metagenome; G_DNA_Supragingival plaque 1951 1877 - Glu TTC [ENA] ¢þ
>WENV180727726 ODGU01010783 [ODGU] human metagenome; G_DNA_Supragingival plaque 1926 2000 + Glu TTC [ENA] ¢þ
>WENV180731842 ODGW01020891 [ODGW] human metagenome; G_DNA_Supragingival plaque 547 621 + Glu TTC [ENA] ¢þ
>WENV180734813 ODGZ01025981 [ODGZ] human metagenome; G_DNA_Supragingival plaque 1189 1262 + Glu TTC [ENA] ¢þ
>WENV180750044 ODHS01000303 [ODHS] human metagenome; G_DNA_Supragingival plaque 2062 1989 - Glu TTC [ENA] ¢þ
>WENV180750932 ODHS01013213 [ODHS] human metagenome; G_DNA_Supragingival plaque 1456 1527 + Glu TTC [ENA] ¢þ
>WENV180780348 ODIN01142074 [ODIN] human metagenome; G_DNA_Throat 101 27 - Glu TTC [ENA] ¢þ
>WENV180787770 ODIS01014571 [ODIS] human metagenome; G_DNA_Supragingival plaque 1346 1419 + Glu TTC [ENA] ¢þ
>WENV180788213 ODIS01039371 [ODIS] human metagenome; G_DNA_Supragingival plaque 3 77 + Glu TTC [ENA] ¢þ
>WENV180796443 ODJB01004853 [ODJB] human metagenome; G_DNA_Supragingival plaque 2623 2697 + Glu TTC [ENA] ¢þ
>WENV180805254 ODJG01119452 [ODJG] human metagenome; G_DNA_Supragingival plaque 119 46 - Glu TTC [ENA] ¢þ
>WENV180809521 ODJK01022599 [ODJK] human metagenome; G_DNA_Subgingival plaque 889 816 - Glu TTC [ENA] ¢þ
>WENV180843753 ODKN01010501 [ODKN] human metagenome; G_DNA_Supragingival plaque 74 1 - Glu TTC [ENA] ¢þ
>WENV180846145 ODKT01006006 [ODKT] human metagenome; G_DNA_Supragingival plaque 3495 3569 + Glu TTC [ENA] ¢þ
>WENV180883781 ODMC01015480 [ODMC] human metagenome; G_DNA_Tongue dorsum 158 231 + Glu TTC [ENA] ¢þ
>WENV180924960 ODTK01027379 [ODTK] human metagenome; G_DNA_Supragingival plaque 384 457 + Glu TTC [ENA] ¢þ
>WENV180930929 ODTP01000750 [ODTP] human metagenome; G_DNA_Tongue dorsum 22123 22196 + Glu TTC [ENA] ¢þ
>WENV180938097 ODTX01000599 [ODTX] human metagenome; G_DNA_Supragingival plaque 2062 1989 - Glu TTC [ENA] ¢þ
>WENV180939858 ODTX01107314 [ODTX] human metagenome; G_DNA_Supragingival plaque 74 1 - Glu TTC [ENA] ¢þ
>WENV180944355 ODUC01014912 [ODUC] human metagenome; G_DNA_Supragingival plaque 74 1 - Glu TTC [ENA] ¢þ
>WENV180950276 ODUG01147221 [ODUG] human metagenome; G_DNA_Tongue dorsum 152 225 + Glu TTC [ENA] ¢þ
>WENV180950818 ODUH01002316 [ODUH] human metagenome; G_DNA_Subgingival plaque 2096 2023 - Glu TTC [ENA] ¢þ
>WENV180951446 ODUH01024499 [ODUH] human metagenome; G_DNA_Subgingival plaque 866 792 - Glu TTC [ENA] ¢þ
>WENV180951519 ODUH01028797 [ODUH] human metagenome; G_DNA_Subgingival plaque 2 76 + Glu TTC [ENA] ¢þ
>WENV180951709 ODUH01044407 [ODUH] human metagenome; G_DNA_Subgingival plaque 883 810 - Glu TTC [ENA] ¢þ
>WENV180976365 ODUY01088346 [ODUY] human metagenome; G_DNA_Supragingival plaque 123 196 + Glu TTC [ENA] ¢þ
>WENV180980280 ODVE01000018 [ODVE] human metagenome; G_DNA_Supragingival plaque 32866 32793 - Glu TTC [ENA] ¢þ
>WENV180980653 ODVE01000949 [ODVE] human metagenome; G_DNA_Supragingival plaque 9969 10043 + Glu TTC [ENA] ¢þ
>WENV180980664 ODVE01000984 [ODVE] human metagenome; G_DNA_Supragingival plaque 3041 2968 - Glu TTC [ENA] ¢þ
>WENV180981051 ODVE01005823 [ODVE] human metagenome; G_DNA_Supragingival plaque 2054 1981 - Glu TTC [ENA] ¢þ
>WENV181008891 ODWE01018331 [ODWE] human metagenome; G_DNA_Supragingival plaque 335 261 - Glu TTC [ENA] ¢þ
>WENV181038579 ODXQ01002355 [ODXQ] human metagenome; G_DNA_Tongue dorsum 8362 8435 + Glu TTC [ENA] ¢þ
>WENV181045029 ODXV01111533 [ODXV] human metagenome; G_DNA_Tongue dorsum 151 78 - Glu TTC [ENA] ¢þ
>WENV181050233 ODYD01009523 [ODYD] human metagenome; G_DNA_Supragingival plaque 2459 2532 + Glu TTC [ENA] ¢þ
>WENV181064975 ODYP01187424 [ODYP] human metagenome; G_DNA_Supragingival plaque 25 98 + Glu TTC [ENA] ¢þ
>WENV181067582 ODZI01027727 [ODZI] human metagenome; G_DNA_Supragingival plaque 82 9 - Glu TTC [ENA] ¢þ
>WENV181074194 OEAO01004421 [OEAO] human metagenome; G_DNA_Tongue dorsum 6207 6134 - Glu TTC [ENA] ¢þ
>WENV181075704 OEAP01000172 [OEAP] human metagenome; G_DNA_Supragingival plaque 23483 23556 + Glu TTC [ENA] ¢þ
>WENV181076031 OEAP01001384 [OEAP] human metagenome; G_DNA_Supragingival plaque 2059 1986 - Glu TTC [ENA] ¢þ
>WENV181078748 OEAS01000443 [OEAS] human metagenome; G_DNA_Supragingival plaque 25072 25146 + Glu TTC [ENA] ¢þ
>WENV181079006 OEAS01001352 [OEAS] human metagenome; G_DNA_Supragingival plaque 12255 12329 + Glu TTC [ENA] ¢þ
>WENV181079078 OEAS01001761 [OEAS] human metagenome; G_DNA_Supragingival plaque 10321 10395 + Glu TTC [ENA] ¢þ
>WENV181079884 OEAS01018454 [OEAS] human metagenome; G_DNA_Supragingival plaque 1914 1987 + Glu TTC [ENA] ¢þ
>WENV181080009 OEAS01022769 [OEAS] human metagenome; G_DNA_Supragingival plaque 2501 2574 + Glu TTC [ENA] ¢þ
>WENV181082067 OEAS01560532 [OEAS] human metagenome; G_DNA_Supragingival plaque 74 1 - Glu TTC [ENA] ¢þ
>WENV181087541 OEAY01060177 [OEAY] human metagenome; G_DNA_Tongue dorsum 3 76 + Glu TTC [ENA] ¢þ
>WENV181090963 OEBC01007329 [OEBC] human metagenome; G_DNA_Supragingival plaque 2040 1967 - Glu TTC [ENA] ¢þ
>WENV181095132 OEBY01003372 [OEBY] human metagenome; G_DNA_Tongue dorsum 5864 5937 + Glu TTC [ENA] ¢þ
>WENV181103306 OECT01066182 [OECT] human metagenome; G_DNA_Tongue dorsum 65 138 + Glu TTC [ENA] ¢þ
>WENV181105741 OEED01013773 [OEED] human metagenome; G_DNA_Tongue dorsum 167 240 + Glu TTC [ENA] ¢þ
>WENV181125442 OEFT01113162 [OEFT] human metagenome; G_DNA_Tongue dorsum 93 20 - Glu TTC [ENA] ¢þ
>WENV181138897 OEGN01001369 [OEGN] human metagenome; G_DNA_Tongue dorsum 11287 11360 + Glu TTC [ENA] ¢þ
>WENV181151717 OEHW01106260 [OEHW] human metagenome; G_DNA_Tongue dorsum 237 164 - Glu TTC [ENA] ¢þ
>WENV181152683 OEIA01003998 [OEIA] human metagenome; G_DNA_Supragingival plaque 2598 2672 + Glu TTC [ENA] ¢þ
>WENV181178877 OEJT01000457 [OEJT] human metagenome; G_DNA_Supragingival plaque 2062 1989 - Glu TTC [ENA] ¢þ
>WENV181179232 OEJT01002158 [OEJT] human metagenome; G_DNA_Supragingival plaque 2116 2043 - Glu TTC [ENA] ¢þ
>WENV181182593 OEJV01020352 [OEJV] human metagenome; G_DNA_Supragingival plaque 328 254 - Glu TTC [ENA] ¢þ
>WENV181208059 OFBA01013702 [OFBA] metagenome; hydrothermal vent 4 78 + Glu TTC [ENA] ¢þ
>W141146165 AWVH01000002 Spirochaetota Treponema lecithinolyticum ATCC 700332 [AWVH] 44539 44466 - Glu TTC [ENA] ¡û
>WENV183509641 OMHJ01002236 [OMHJ] human oral metagenome; human oral 1227 1153 - Glu TTC [ENA] ¢þ
>WENV183704851 PDWI01000685 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 7830 7903 + Glu TTC [ENA] ¢þ
>WENV183718577 PDWJ01005117 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 5592 5665 + Glu TTC [ENA] ¢þ
>WENV183719533 PDWJ01015751 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 4484 4555 + Glu TTC [ENA] ¢þ
>WENV170112428 CEGE01007834 [CEGE] microbial mat metagenome; grass silage 1265 1193 - Glu TTC [ENA] ¢þ
>WENV170635180 JDSF01000191 [JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA 4142 4214 + Glu TTC [ENA] ¢þ
>WENV170641315 JFJP01036772 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 20 94 + Glu TTC [ENA] ¢þ
>WENV170654954 JTFN01000086 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 34863 34936 + Glu TTC [ENA] ¢þ
>WENV170655507 JTFN01039635 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 423 351 - Glu TTC [ENA] ¢þ
>WENV170656250 JTFO01006692 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 643 571 - Glu TTC [ENA] ¢þ
>WENV170656270 JTFO01007583 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 1594 1667 + Glu TTC [ENA] ¢þ
>WENV170689365 LFRM01291031 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 392 318 - Glu TTC [ENA] ¢þ
>WENV170722765 LSQX01242341 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 2454 2380 - Glu TTC [ENA] ¢þ
>WENV170779145 LZCG01001707 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 720 792 + Glu TTC [ENA] ¢þ
>C141003671 CP004120 Spirochaetota Treponema pedis str. T A4 [CP004120] 2399965 2400037 + Glu TTC [Ensembl] ¡û
>W1810893579 QUWK01000012 Spirochaetota Sphaerochaeta halotolerans 4·î11Æü [QUWK] 91457 91385 - Glu TTC [ENA] ¡û
>C151046008 CP009227 Spirochaetota Treponema sp. OMZ 838 [CP009227] 1290379 1290306 - Glu TTC [Ensembl] ¡û
>C151046044 CP009228 Spirochaetota Treponema putidum OMZ 758 [CP009228] 2430684 2430611 - Glu TTC [Ensembl] ¡û
>W10106166 ACYH01000038 Spirochaetota Treponema vincentii ATCC 35580 [ACYH] 1907 1832 - Glu TTC [ENA] ¡û
>W1510074556 CDNC01000023 Spirochaetota Treponema phagedenis V1 [CDNC] 138222 138149 - Glu TTC [ENA] ¡û
>W11108489 ACYH01000038 Spirochaetota Treponema vincentii ATCC 35580 [ACYH] 1907 1832 - Glu TTC [ENA] ¡û
>W11115141 ADEC01000014 Spirochaetota Treponema denticola F0402 [ADEC] 334135 334208 + Glu TTC [ENA] ¡û
>C11121328 CP002541 Spirochaetota Sphaerochaeta globosa str. Buddy [CP002541] 1345609 1345536 - Glu TTC [Ensembl] ¡û
>C11122435 CP002696 Spirochaetota Treponema brennaborense DSM 12168 [CP002696] 2159591 2159516 - Glu TTC [Ensembl] ¡û
>W11135652 AEFH01000086 Spirochaetota Treponema phagedenis F0421 [AEFH] 23725 23798 + Glu TTC [ENA] ¡û
>W1610948499 LVBI01000024 Spirochaetota Spirochaetales bacterium Spiro_07 [LVBI] 15028 14955 - Glu TTC [ENA] ¡û
>W1610948524 LVBJ01000013 Spirochaetota Spirochaetales bacterium Spiro_08 [LVBJ] 65515 65590 + Glu TTC [ENA] ¡û
>W1610948565 LVBK01000008 Spirochaetota Spirochaetales bacterium Spiro_09 [LVBK] 23143 23214 + Glu TTC [ENA] ¡û
>W1610948605 LVBL01000008 Spirochaetota Spirochaetales bacterium Spiro_10 [LVBL] 32300 32226 - Glu TTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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