tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.403836 (125 seq.)
>W1710785102 LJHO01000008 Alphaproteobacteria Novosphingobium sp. AAP1 [LJHO] 92091 92017 - Glu TTC [ENA] ¡û
>W1710785521 LJHX01000176 Alphaproteobacteria alpha proteobacterium AAP81b [LJHX] 7870 7944 + Glu CTC [ENA] ¡û
>W1710785602 LJHZ01000099 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 8971 9045 + Glu TTC [ENA] ¡û
>W1710856845 LLZR01000007 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 191881 191955 + Glu CTC [ENA] ¡û
>W1710870810 LMKV01000001 Alphaproteobacteria Sphingobium sp. Leaf26 [LMKV] 34996 35070 + Glu CTC [ENA] ¡û
>W1711072884 LSIA01000020 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 48097 48023 - Glu TTC [ENA] ¡û
>W1711082195 LSTR01000040 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 275449 275523 + Glu CTC [ENA] ¡û
>W1711146754 LVJD01000051 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 60804 60878 + Glu CTC [ENA] ¡û
>W131224724 AUDA01000105 Alphaproteobacteria Sphingobium indicum IP26 [AUDA] 44606 44680 + Glu CTC [ENA] ¡û
>W1711387024 MEGC01000070 Alphaproteobacteria Novosphingobium sp. SCN 63-17 [MEGC] 5200 5126 - Glu TTC [ENA] ¡û
>W1711506371 MKWI01000024 Alphaproteobacteria Sphingobium sp. 66-54 [MKWI] 68057 68131 + Glu TTC [ENA] ¡û
>W1711766429 MUYJ01000007 Alphaproteobacteria Erythrobacter tepidarius [MUYJ] 137164 137238 + Glu TTC [ENA] ¡û
>W1712076995 NGUN01000003 Alphaproteobacteria Sphingobium sp. GW456-12-10-14-TSB1 [NGUN] 715578 715504 - Glu CTC [ENA] ¡û
>C171047035 CP016306 Alphaproteobacteria Sphingomonas sp. KC8 [CP016306] 595089 595163 + Glu CTC - ¡û
>W131104470 APCQ01000489 Alphaproteobacteria Novosphingobium sp. B-7 [APCQ] 5061 4987 - Glu TTC [ENA] ¡û
>W131104472 APCQ01000489 Alphaproteobacteria Novosphingobium sp. B-7 [APCQ] 4809 4735 - Glu TTC [ENA] ¡û
>W131229836 AUHC01000001 Alphaproteobacteria Erythrobacter cryptus DSM 12079 [AUHC] 54192 54118 - Glu TTC [ENA] ¡û
>W131002973 AGZU01000005 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 34273 34347 + Glu CTC [ENA] ¡û
>W131052393 AMYX01000075 Alphaproteobacteria alpha proteobacterium LLX12A [AMYX] 17251 17325 + Glu CTC [ENA] ¡û
>W131241120 BARE01000007 Alphaproteobacteria Sphingobium xenophagum NBRC 107872 [BARE] 4277 4203 - Glu CTC [ENA] ¡û
>W131251297 CAVK010000081 Alphaproteobacteria Sphingobium indicum BiD32 [CAVK] 9223 9149 - Glu CTC [ENA] ¡û
>C014694 CP000248 Alphaproteobacteria Novosphingobium aromaticivorans DSM 12444 [CP000248] 2415278 2415352 + Glu TTC [Ensembl] ¡û
>w016537 AAQG01000012 Alphaproteobacteria Sphingomonas sp. SKA58 [AAQG] 32880 32809 - Glu CTC [ENA] ¡û
>WENV180020139 FTCV01002366 [FTCV] metagenome; soil 2789 2715 - Glu CTC [ENA] ¢þ
>WENV180692317 OCZS010465467 [OCZS] soil metagenome; soil 342 268 - Glu CTC [ENA] ¢þ
>W141076274 ATDO01000076 Alphaproteobacteria Sphingobium sp. HDIP04 [ATDO] 38566 38492 - Glu CTC [ENA] ¡û
>W141077966 ATHL01000100 Alphaproteobacteria Novosphingobium lindaniclasticum LE124 [ATHL] 69179 69253 + Glu CTC [ENA] ¡û
>W141078125 ATHO01000167 Alphaproteobacteria Sphingobium quisquiliarum P25 [ATHO] 71752 71678 - Glu CTC [ENA] ¡û
>WENV181167542 OEIU01041285 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 96 170 + Glu CTC [ENA] ¢þ
>WENV181189813 OEOF01235706 [OEOF] activated sludge metagenome; Activated Sludge 162 88 - Glu CTC [ENA] ¢þ
>WENV181222772 OFDC01000239 [OFDC] hot springs metagenome; Water 35699 35773 + Glu TTC [ENA] ¢þ
>WENV181227542 OFDN01015560 [OFDN] hot springs metagenome; Water 2500 2574 + Glu TTC [ENA] ¢þ
>WENV181228019 OFDN01111004 [OFDN] hot springs metagenome; Water 116 42 - Glu CTC [ENA] ¢þ
>W141191353 AYOY01000156 Alphaproteobacteria Sphingobium sp. C100 [AYOY] 11778 11852 + Glu CTC [ENA] ¡û
>W141230397 BASZ01000006 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [BASZ] 329809 329883 + Glu TTC [ENA] ¡û
>W141230398 BASZ01000006 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [BASZ] 329926 330000 + Glu TTC [ENA] ¡û
>WENV182547919 OJBU01001962 [OJBU] seawater metagenome; Sea water 300 226 - Glu CTC [ENA] ¢þ
>WENV182549276 OJBY01000102 [OJBY] seawater metagenome; Sea water 16509 16435 - Glu CTC [ENA] ¢þ
>WENV182558883 OJDN01010761 [OJDN] seawater metagenome; Sea water 914 840 - Glu CTC [ENA] ¢þ
>WENV182593182 OJIT01002450 [OJIT] seawater metagenome; Sea water 555 481 - Glu CTC [ENA] ¢þ
>W141285078 JANF02000047 Alphaproteobacteria Sphingobium indicum F2 [JANF] 28901 28975 + Glu CTC [ENA] ¡û
>WENV183726624 PJTO01000033 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 176204 176278 + Glu CTC [ENA] ¢þ
>WENV183729417 PJTQ01037019 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 392 318 - Glu CTC [ENA] ¢þ
>WENV183730537 PJTS01000112 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 77635 77709 + Glu CTC [ENA] ¢þ
>WENV183732714 PJTX01007731 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 483 557 + Glu CTC [ENA] ¢þ
>WENV183733028 PJTY01000022 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 161305 161231 - Glu CTC [ENA] ¢þ
>WENV183733309 PJTY01000834 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 2931 2857 - Glu CTC [ENA] ¢þ
>WENV183748779 PPFU01079777 [PPFU] hypolithon metagenome; Antarctic Hypolithon 515 589 + Glu CTC [ENA] ¢þ
>WENV183749565 PPFU01185893 [PPFU] hypolithon metagenome; Antarctic Hypolithon 3263 3189 - Glu CTC [ENA] ¢þ
>WENV170002836 AGTN01143933 [AGTN] bioreactor metagenome; poplar biomass 114 40 - Glu TTC [ENA] ¢þ
>WENV170010302 APMI01013133 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 14166 14092 - Glu CTC [ENA] ¢þ
>WENV170010304 APMI01013171 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 2946 3020 + Glu CTC [ENA] ¢þ
>WENV170010891 APMI01033580 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 2224 2298 + Glu TTC [ENA] ¢þ
>WENV170012078 APMI01117803 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1503 1429 - Glu TTC [ENA] ¢þ
>ENV08002201 ABON01008872 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 78 4 - Glu TTC [ENA] ¡û
>WENV170136807 CENV01078639 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2330 2404 + Glu CTC [ENA] ¢þ
>WENV170228633 CEQG01027453 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14890 14964 + Glu CTC [ENA] ¢þ
>WENV170231138 CEQH01126467 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 272 - Glu CTC [ENA] ¢þ
>WENV170232621 CEQI01083782 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 815 741 - Glu CTC [ENA] ¢þ
>WENV170236528 CEQL01327792 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 42 - Glu CTC [ENA] ¢þ
>WENV170264242 CERD01016812 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5357 5431 + Glu CTC [ENA] ¢þ
>WENV170379700 CETV01192037 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 264 190 - Glu CTC [ENA] ¢þ
>WENV170475985 CEVI01057560 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 109 183 + Glu CTC [ENA] ¢þ
>WENV170555423 CXWL01000579 [CXWL] groundwater metagenome; biofilm material 54039 53965 - Glu CTC [ENA] ¢þ
>WENV170555541 CXWL01000961 [CXWL] groundwater metagenome; biofilm material 5602 5676 + Glu CTC [ENA] ¢þ
>WENV170556137 CXWL01005137 [CXWL] groundwater metagenome; biofilm material 72526 72600 + Glu CTC [ENA] ¢þ
>WENV170839363 MDSZ01184390 [MDSZ] marine metagenome; seawater 6846 6920 + Glu CTC [ENA] ¢þ
>C181089675 CP023741 Alphaproteobacteria Sphingobium yanoikuyae S72 [CP023741] 2112575 2112649 + Glu CTC - ¡û
>C191002769 AP018518 Alphaproteobacteria Sphingobium sp. YG1 [AP018518, AP018519] 943048 942974 - Glu CTC - ¡û
>W141520458 JGVR01000019 Alphaproteobacteria Sphingobium yanoikuyae [JGVR] 58084 58158 + Glu CTC [ENA] ¡û
>C191057050 CP028347 Alphaproteobacteria Novosphingobium sp. THN1 [CP028347] 2891014 2891088 + Glu TTC - ¡û
>C191063625 CP029335 Alphaproteobacteria Sphingobium sp. LF-16 [CP029335] 1631173 1631247 + Glu CTC - ¡û
>C191121079 CP034179 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [CP034179] 3774034 3773960 - Glu TTC - ¡û
>C191121080 CP034179 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [CP034179] 3773917 3773843 - Glu TTC - ¡û
>C191163690 CP039248 Alphaproteobacteria Sphingobium sp. PAMC28499 [CP039248] 3383419 3383493 + Glu CTC - ¡û
>C191170972 CP039695 Alphaproteobacteria Novosphingobium sp. EMRT-2 [CP039695] 3512501 3512427 - Glu TTC - ¡û
>W09100329 AAAV03000005 Alphaproteobacteria Novosphingobium aromaticivorans DSM 12444 [AAAV] 73441 73515 + Glu TTC [ENA] ¡û
>W141807765 JPOU01000046 Alphaproteobacteria Sphingobium yanoikuyae [JPOU] 41266 41192 - Glu CTC [ENA] ¡û
>W1910231946 FPEH01000012 Alphaproteobacteria Novosphingobium sp. NDB2Meth1 [FPEH] 155642 155568 - Glu TTC [ENA] ¡û
>W1910744362 MIAL01000026 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL] 38037 37963 - Glu CTC [ENA] ¡û
>W1911114826 NOIW01000058 Alphaproteobacteria Sphingobium sp. IP1 [NOIW] 16698 16772 + Glu CTC [ENA] ¡û
>SRA1000144 SRR001036.62649 Marine Viruses from Arctic Ocean (SRP000129) 71 -1 - Glu CTC [SRA]
>W1911722462 QRAL01000079 Alphaproteobacteria Sphingobium yanoikuyae SK-NIH.Env6_1116 [QRAL] 1011 937 - Glu CTC [ENA] ¡û
>W1911737885 QTTB01000004 Alphaproteobacteria Tsuneonella troitsensis KMM 6042 [QTTB] 998216 998290 + Glu CTC [ENA] ¡û
>W1911746102 QVRA01000015 Alphaproteobacteria Sphingobium terrigena EO9 [QVRA] 87675 87749 + Glu CTC [ENA] ¡û
>W1911823529 QZVQ01000010 Alphaproteobacteria Croceibacterium ferulae SX2RGS8 [QZVQ] 137960 137886 - Glu CTC [ENA] ¡û
>W1810109392 PHHF01000040 Alphaproteobacteria Sphingomonas fennica K101 [PHHF] 47448 47522 + Glu TTC [ENA] ¡û
>W1810195671 PKRT01000001 Alphaproteobacteria Novosphingobium sp. TH158 [PKRT] 631974 632048 + Glu TTC [ENA] ¡û
>W1810400891 PYGL01000013 Alphaproteobacteria Sphingobium sp. AEW4 [PYGL] 1259 1185 - Glu CTC [ENA] ¡û
>W1810597610 QGHL01000007 Alphaproteobacteria Novosphingobium meiothermophilum SYSU G00007 [QGHL] 786930 787004 + Glu TTC [ENA] ¡û
>W1810677114 QKMM01000001 Alphaproteobacteria Novosphingobium sp. B3058 49 [QKMM] 759089 759163 + Glu CTC [ENA] ¡û
>W1810725213 QOCK01000001 Alphaproteobacteria 'Sphingomonas ginsengisoli' Hoang et al. 2012 KCTC 12630 [QOCK] 481365 481439 + Glu CTC [ENA] ¡û
>C151079659 CP011310 Alphaproteobacteria Aurantiacibacter atlanticus s21-N3 [CP011310] 2177666 2177740 + Glu CTC [Ensembl] ¡û
>W1510019771 BBXA01000033 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 142945 143019 + Glu TTC [ENA] ¡û
>W1510756959 JACT01000001 Alphaproteobacteria Sphingobium cupriresistens LL01 [JACT] 1304560 1304486 - Glu CTC [ENA] ¡û
>W1510941335 JFFT01000012 Alphaproteobacteria Sphingobium yanoikuyae SHJ [JFFT] 35271 35345 + Glu CTC [ENA] ¡û
>W1511356989 JRVC01000002 Alphaproteobacteria Novosphingobium subterraneum DSM 12447 [JRVC] 202858 202932 + Glu TTC [ENA] ¡û
>W1511592096 LBIC01000003 Alphaproteobacteria Sphingobium chungbukense DJ77 [LBIC] 536977 537051 + Glu CTC [ENA] ¡û
>W11167336 AFMP01000011 Alphaproteobacteria Sphingomonas sp. KC8 [AFMP] 45200 45126 - Glu CTC [ENA] ¡û
>W11176443 AFXE01000101 Alphaproteobacteria Sphingobium yanoikuyae XLDN2-5 [AFXE] 6617 6543 - Glu CTC [ENA] ¡û
>C161092723 CP015986 Alphaproteobacteria Sphingobium sp. EP60837 [CP015986, CP015987] 2492062 2491988 - Glu CTC [Ensembl] ¡û
>W1610076542 BCYV01000004 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 88337 88263 - Glu TTC [ENA] ¡û
>W1610076544 BCYV01000004 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 88085 88011 - Glu TTC [ENA] ¡û
>W1610076997 BCZE01000022 Alphaproteobacteria Novosphingobium rosa NBRC 15208 [BCZE] 103384 103458 + Glu TTC [ENA] ¡û
>W1610077048 BCZF01000024 Alphaproteobacteria Novosphingobium subterraneum NBRC 16086 [BCZF] 44488 44562 + Glu TTC [ENA] ¡û
>W121068966 AJVL01000067 Alphaproteobacteria Sphingobium sp. AP49 [AJVL] 35912 35986 + Glu CTC [ENA] ¡û
>W121084324 AKIB01000028 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 5001 5075 + Glu CTC [ENA] ¡û
>C131011850 CP004036 Alphaproteobacteria Sphingomonas sp. MM-1 [CP004036] 2001591 2001665 + Glu TTC [Ensembl] ¡û
>W1610535204 JRQQ01000002 Alphaproteobacteria Croceicoccus estronivorus MH-B5 [JRQQ] 285619 285693 + Glu TTC [ENA] ¡û
>W1610648908 LJHO01000008 Alphaproteobacteria Novosphingobium sp. AAP1 [LJHO] 92091 92017 - Glu TTC [ENA] ¡û
>W1610649327 LJHX01000176 Alphaproteobacteria alpha proteobacterium AAP81b [LJHX] 7870 7944 + Glu CTC [ENA] ¡û
>W1610649408 LJHZ01000099 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 8971 9045 + Glu TTC [ENA] ¡û
>W1610719226 LLZR01000007 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 191881 191955 + Glu CTC [ENA] ¡û
>W1610733156 LMKV01000001 Alphaproteobacteria Sphingobium sp. Leaf26 [LMKV] 34996 35070 + Glu CTC [ENA] ¡û
>W1610912144 LSIA01000020 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 48097 48023 - Glu TTC [ENA] ¡û
>W1610920980 LSTR01000040 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 275449 275523 + Glu CTC [ENA] ¡û
>W1710074231 BCYV01000004 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 88337 88263 - Glu TTC [ENA] ¡û
>W1710074233 BCYV01000004 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 88085 88011 - Glu TTC [ENA] ¡û
>W1710074686 BCZE01000022 Alphaproteobacteria Novosphingobium rosa NBRC 15208 [BCZE] 103384 103458 + Glu TTC [ENA] ¡û
>W1710074737 BCZF01000024 Alphaproteobacteria Novosphingobium subterraneum NBRC 16086 [BCZF] 44488 44562 + Glu TTC [ENA] ¡û
>W1710507980 FMVR01000003 Alphaproteobacteria Novosphingobium aromaticivorans stygium [FMVR] 80936 81010 + Glu TTC [ENA] ¡û
>W1710551588 FOGE01000024 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 16453 16379 - Glu CTC [ENA] ¡û
>W1710592170 FRCG01000007 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 58440 58366 - Glu CTC [ENA] ¡û
>W1710606005 FWXL01000011 Alphaproteobacteria Novosphingobium sp. B1 [FWXL] 58832 58906 + Glu TTC [ENA] ¡û
>W1710637673 JRQQ01000002 Alphaproteobacteria Croceicoccus estronivorus MH-B5 [JRQQ] 285619 285693 + Glu TTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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