Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.413951 (130 seq.)
	>W1711090901	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4005	4078	+	Gly	TCC	[ENA]	○
	>W1711090904	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4330	4403	+	Gly	TCC	[ENA]	○
	>W1711090908	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4739	4812	+	Gly	TCC	[ENA]	○
	>W1711090914	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	5356	5429	+	Gly	TCC	[ENA]	○
	>C007081	AE015927	Bacillota	Clostridium tetani E88 Massachusetts [AE015927]	2524253	2524180	-	Gly	TCC	[Ensembl]	○
	>C007089	AE015927	Bacillota	Clostridium tetani E88 Massachusetts [AE015927]	2523556	2523483	-	Gly	TCC	[Ensembl]	○
	>WENV183746753	PPCM01000005	[PPCM] marine sediment metagenome; marine sediment		429773	429700	-	Gly	TCC	[ENA]	◯
	>WENV170660762	JXWU01026172	[JXWU] soil metagenome; rice field; organic control Plot		295	368	+	Gly	TCC	[ENA]	◯
	>C181136106	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	666984	667057	+	Gly	TCC	-	○
	>C181136111	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	667505	667578	+	Gly	TCC	-	○
	>C181136115	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	667845	667918	+	Gly	TCC	-	○
	>C181136120	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	668380	668453	+	Gly	TCC	-	○
	>C181136124	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	668720	668793	+	Gly	TCC	-	○
	>C181136130	CP026600	Bacillota	Clostridiaceae bacterium 14S0207 [CP026600]	669331	669404	+	Gly	TCC	-	○
	>C181159851	CP027782	Bacillota	Clostridium tetani Mfbjulcb2 [CP027782]	303412	303485	+	Gly	TCC	-	○
	>C181159862	CP027782	Bacillota	Clostridium tetani Mfbjulcb2 [CP027782]	2472391	2472464	+	Gly	TCC	-	○
	>C181226468	LT906477	Bacillota	Clostridium cochlearium NCTC13027 [LT906477]	2037666	2037593	-	Gly	TCC	-	○
	>C181226487	LT906477	Bacillota	Clostridium cochlearium NCTC13027 [LT906477]	2035988	2035915	-	Gly	TCC	-	○
	>C191222062	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	735731	735804	+	Gly	TCC	-	○
	>C191222068	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	736319	736392	+	Gly	TCC	-	○
	>C191222071	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	736586	736659	+	Gly	TCC	-	○
	>C191222077	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	737173	737246	+	Gly	TCC	-	○
	>C191222081	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	737519	737592	+	Gly	TCC	-	○
	>C191222086	LR590481	Bacillota	Hathewaya histolytica NCTC503 [LR590481]	738027	738100	+	Gly	TCC	-	○
	>W1911491604	OAOH01000001	Bacillota	Clostridium cochlearium [OAOH]	278680	278753	+	Gly	TCC	[ENA]	○
	>W1911694053	QMAN01000002	Bacillota	Clostridium tetani 1337 [QMAN]	364843	364770	-	Gly	TCC	[ENA]	○
	>W1911694089	QMAN01000039	Bacillota	Clostridium tetani 1337 [QMAN]	235	162	-	Gly	TCC	[ENA]	○
	>W1911694121	QMAO01000013	Bacillota	Clostridium tetani 778.17 [QMAO]	284096	284023	-	Gly	TCC	[ENA]	○
	>W1911694128	QMAO01000013	Bacillota	Clostridium tetani 778.17 [QMAO]	283485	283412	-	Gly	TCC	[ENA]	○
	>W1911694132	QMAO01000013	Bacillota	Clostridium tetani 778.17 [QMAO]	283094	283021	-	Gly	TCC	[ENA]	○
	>W1911694139	QMAO01000013	Bacillota	Clostridium tetani 778.17 [QMAO]	282483	282410	-	Gly	TCC	[ENA]	○
	>W1911694164	QMAP01000005	Bacillota	Clostridium tetani 2017.061 [QMAP]	333	406	+	Gly	TCC	[ENA]	○
	>W1911694192	QMAP01000017	Bacillota	Clostridium tetani 2017.061 [QMAP]	356	283	-	Gly	TCC	[ENA]	○
	>W1911694206	QMAP01000029	Bacillota	Clostridium tetani 2017.061 [QMAP]	712	639	-	Gly	TCC	[ENA]	○
	>W1911694210	QMAP01000029	Bacillota	Clostridium tetani 2017.061 [QMAP]	321	248	-	Gly	TCC	[ENA]	○
	>W1911694241	QMAQ01000032	Bacillota	Clostridium tetani 202.15 [QMAQ]	6	79	+	Gly	TCC	[ENA]	○
	>W1911694256	QMAQ01000039	Bacillota	Clostridium tetani 202.15 [QMAQ]	39537	39610	+	Gly	TCC	[ENA]	○
	>W1911694277	QMAR01000009	Bacillota	Clostridium tetani 157.15 [QMAR]	773	700	-	Gly	TCC	[ENA]	○
	>W1911694318	QMAR01000023	Bacillota	Clostridium tetani 157.15 [QMAR]	256399	256326	-	Gly	TCC	[ENA]	○
	>W1911694354	QMAS01000023	Bacillota	Clostridium tetani 89.12 [QMAS]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911694361	QMAS01000023	Bacillota	Clostridium tetani 89.12 [QMAS]	40146	40219	+	Gly	TCC	[ENA]	○
	>W1911694365	QMAS01000023	Bacillota	Clostridium tetani 89.12 [QMAS]	40537	40610	+	Gly	TCC	[ENA]	○
	>W1911694373	QMAS01000023	Bacillota	Clostridium tetani 89.12 [QMAS]	41236	41309	+	Gly	TCC	[ENA]	○
	>W1911694404	QMAT01000001	Bacillota	Clostridium tetani 46.1.08 [QMAT]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911694411	QMAT01000001	Bacillota	Clostridium tetani 46.1.08 [QMAT]	40146	40219	+	Gly	TCC	[ENA]	○
	>W1911694493	QMAU01000015	Bacillota	Clostridium tetani 63.05 [QMAU]	37663	37736	+	Gly	TCC	[ENA]	○
	>W1911694501	QMAU01000015	Bacillota	Clostridium tetani 63.05 [QMAU]	38360	38433	+	Gly	TCC	[ENA]	○
	>W1911694516	QMAU01000056	Bacillota	Clostridium tetani 63.05 [QMAU]	104	177	+	Gly	TCC	[ENA]	○
	>W1911694520	QMAU01000056	Bacillota	Clostridium tetani 63.05 [QMAU]	495	568	+	Gly	TCC	[ENA]	○
	>W1911694527	QMAV01000002	Bacillota	Clostridium tetani 358.99 [QMAV]	4	77	+	Gly	TCC	[ENA]	○
	>W1911694552	QMAV01000022	Bacillota	Clostridium tetani 358.99 [QMAV]	39537	39610	+	Gly	TCC	[ENA]	○
	>W1911694564	QMAV01000049	Bacillota	Clostridium tetani 358.99 [QMAV]	914	841	-	Gly	TCC	[ENA]	○
	>W1911694568	QMAV01000049	Bacillota	Clostridium tetani 358.99 [QMAV]	523	450	-	Gly	TCC	[ENA]	○
	>W1911694573	QMAV01000049	Bacillota	Clostridium tetani 358.99 [QMAV]	74	1	-	Gly	TCC	[ENA]	○
	>W1911694581	QMAW01000003	Bacillota	Clostridium tetani 75.97 [QMAW]	4	77	+	Gly	TCC	[ENA]	○
	>W1911694607	QMAW01000018	Bacillota	Clostridium tetani 75.97 [QMAW]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911694621	QMAW01000037	Bacillota	Clostridium tetani 75.97 [QMAW]	714	641	-	Gly	TCC	[ENA]	○
	>W1911694625	QMAW01000037	Bacillota	Clostridium tetani 75.97 [QMAW]	323	250	-	Gly	TCC	[ENA]	○
	>W1911694636	QMAW01000040	Bacillota	Clostridium tetani 75.97 [QMAW]	74	1	-	Gly	TCC	[ENA]	○
	>W1911694640	QMAX01000003	Bacillota	Clostridium tetani 407.86 [QMAX]	4	77	+	Gly	TCC	[ENA]	○
	>W1911694667	QMAX01000017	Bacillota	Clostridium tetani 407.86 [QMAX]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911694681	QMAX01000035	Bacillota	Clostridium tetani 407.86 [QMAX]	714	641	-	Gly	TCC	[ENA]	○
	>W1911694685	QMAX01000035	Bacillota	Clostridium tetani 407.86 [QMAX]	323	250	-	Gly	TCC	[ENA]	○
	>W1911694698	QMAX01000039	Bacillota	Clostridium tetani 407.86 [QMAX]	74	1	-	Gly	TCC	[ENA]	○
	>W1911694701	QMAY01000004	Bacillota	Clostridium tetani 641.84 [QMAY]	264377	264304	-	Gly	TCC	[ENA]	○
	>W1911694730	QMAY01000015	Bacillota	Clostridium tetani 641.84 [QMAY]	39420	39493	+	Gly	TCC	[ENA]	○
	>W1911694744	QMAY01000028	Bacillota	Clostridium tetani 641.84 [QMAY]	714	641	-	Gly	TCC	[ENA]	○
	>W1911694748	QMAY01000028	Bacillota	Clostridium tetani 641.84 [QMAY]	323	250	-	Gly	TCC	[ENA]	○
	>W1911694759	QMAY01000032	Bacillota	Clostridium tetani 641.84 [QMAY]	74	1	-	Gly	TCC	[ENA]	○
	>W1911694784	QMAZ01000022	Bacillota	Clostridium tetani 132CV [QMAZ]	192060	191987	-	Gly	TCC	[ENA]	○
	>W1911694791	QMAZ01000022	Bacillota	Clostridium tetani 132CV [QMAZ]	191447	191374	-	Gly	TCC	[ENA]	○
	>W1911694852	QMBA01000013	Bacillota	Clostridium tetani 3582 [QMBA]	52195	52268	+	Gly	TCC	[ENA]	○
	>W1911694859	QMBA01000013	Bacillota	Clostridium tetani 3582 [QMBA]	52806	52879	+	Gly	TCC	[ENA]	○
	>W1911694912	QMBB01000014	Bacillota	Clostridium tetani TMB2 [QMBB]	39608	39681	+	Gly	TCC	[ENA]	○
	>W1911694930	QMBB01000022	Bacillota	Clostridium tetani TMB2 [QMBB]	13203	13130	-	Gly	TCC	[ENA]	○
	>W1911694946	QMBC01000004	Bacillota	Clostridium tetani COR1 [QMBC]	4	77	+	Gly	TCC	[ENA]	○
	>W1911694967	QMBC01000015	Bacillota	Clostridium tetani COR1 [QMBC]	237	164	-	Gly	TCC	[ENA]	○
	>W1911694981	QMBC01000038	Bacillota	Clostridium tetani COR1 [QMBC]	714	641	-	Gly	TCC	[ENA]	○
	>W1911694985	QMBC01000038	Bacillota	Clostridium tetani COR1 [QMBC]	323	250	-	Gly	TCC	[ENA]	○
	>W1911694996	QMBC01000042	Bacillota	Clostridium tetani COR1 [QMBC]	74	1	-	Gly	TCC	[ENA]	○
	>W1911694998	QMBD01000001	Bacillota	Clostridium tetani B4 [QMBD]	4	77	+	Gly	TCC	[ENA]	○
	>W1911695032	QMBD01000020	Bacillota	Clostridium tetani B4 [QMBD]	1325	1252	-	Gly	TCC	[ENA]	○
	>W1911695039	QMBD01000020	Bacillota	Clostridium tetani B4 [QMBD]	714	641	-	Gly	TCC	[ENA]	○
	>W1911695043	QMBD01000020	Bacillota	Clostridium tetani B4 [QMBD]	323	250	-	Gly	TCC	[ENA]	○
	>W1911695095	QMBE01000021	Bacillota	Clostridium tetani 512-15 [QMBE]	90819	90746	-	Gly	TCC	[ENA]	○
	>W1911695104	QMBE01000021	Bacillota	Clostridium tetani 512-15 [QMBE]	89891	89818	-	Gly	TCC	[ENA]	○
	>W1911695112	QMBE01000021	Bacillota	Clostridium tetani 512-15 [QMBE]	89192	89119	-	Gly	TCC	[ENA]	○
	>W1911695132	QMBF01000004	Bacillota	Clostridium tetani 329 [QMBF]	4	77	+	Gly	TCC	[ENA]	○
	>W1911695165	QMBF01000019	Bacillota	Clostridium tetani 329 [QMBF]	22959	23032	+	Gly	TCC	[ENA]	○
	>W1911695170	QMBF01000038	Bacillota	Clostridium tetani 329 [QMBF]	714	641	-	Gly	TCC	[ENA]	○
	>W1911695174	QMBF01000038	Bacillota	Clostridium tetani 329 [QMBF]	323	250	-	Gly	TCC	[ENA]	○
	>W1911695185	QMBF01000041	Bacillota	Clostridium tetani 329 [QMBF]	74	1	-	Gly	TCC	[ENA]	○
	>W1911695193	QMBG01000003	Bacillota	Clostridium tetani 1240 [QMBG]	249017	248944	-	Gly	TCC	[ENA]	○
	>W1911695216	QMBG01000022	Bacillota	Clostridium tetani 1240 [QMBG]	235	162	-	Gly	TCC	[ENA]	○
	>W1911695229	QMBG01000042	Bacillota	Clostridium tetani 1240 [QMBG]	714	641	-	Gly	TCC	[ENA]	○
	>W1911695233	QMBG01000042	Bacillota	Clostridium tetani 1240 [QMBG]	323	250	-	Gly	TCC	[ENA]	○
	>W1911695244	QMBG01000045	Bacillota	Clostridium tetani 1240 [QMBG]	74	1	-	Gly	TCC	[ENA]	○
	>W1911695273	QMBH01000015	Bacillota	Clostridium tetani 1586-Z1 [QMBH]	371112	371039	-	Gly	TCC	[ENA]	○
	>W1911695281	QMBH01000015	Bacillota	Clostridium tetani 1586-Z1 [QMBH]	370415	370342	-	Gly	TCC	[ENA]	○
	>W1911695320	QMBI01000021	Bacillota	Clostridium tetani 1586-U1 [QMBI]	234	307	+	Gly	TCC	[ENA]	○
	>W1911695328	QMBI01000021	Bacillota	Clostridium tetani 1586-U1 [QMBI]	931	1004	+	Gly	TCC	[ENA]	○
	>W1911695352	QMBI01000034	Bacillota	Clostridium tetani 1586-U1 [QMBI]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911695372	QMBJ01000015	Bacillota	Clostridium tetani 4784A [QMBJ]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911695380	QMBJ01000015	Bacillota	Clostridium tetani 4784A [QMBJ]	40232	40305	+	Gly	TCC	[ENA]	○
	>W1911695419	QMBK01000009	Bacillota	Clostridium tetani Strain 3 [QMBK]	39585	39658	+	Gly	TCC	[ENA]	○
	>W1911695427	QMBK01000009	Bacillota	Clostridium tetani Strain 3 [QMBK]	40282	40355	+	Gly	TCC	[ENA]	○
	>W1911695465	QMBL01000002	Bacillota	Clostridium tetani Harvard [QMBL]	39535	39608	+	Gly	TCC	[ENA]	○
	>W1911695473	QMBL01000002	Bacillota	Clostridium tetani Harvard [QMBL]	40232	40305	+	Gly	TCC	[ENA]	○
	>W1911696424	QMDR01000044	Bacillota	Clostridium tetani 3483 [QMDR]	37593	37666	+	Gly	TCC	[ENA]	○
	>W1911696432	QMDR01000044	Bacillota	Clostridium tetani 3483 [QMDR]	38290	38363	+	Gly	TCC	[ENA]	○
	>W1911696440	QMDR01000063	Bacillota	Clostridium tetani 3483 [QMDR]	104	177	+	Gly	TCC	[ENA]	○
	>W1911696444	QMDR01000063	Bacillota	Clostridium tetani 3483 [QMDR]	495	568	+	Gly	TCC	[ENA]	○
	>C151100888	HG530135	Bacillota	Clostridium tetani 12124569 [HG530135]	2516187	2516114	-	Gly	TCC	[Ensembl]	○
	>C151100895	HG530135	Bacillota	Clostridium tetani 12124569 [HG530135]	2515576	2515503	-	Gly	TCC	[Ensembl]	○
	>W1511345175	JRGG01000003	Bacillota	Clostridium tetani C2 [JRGG]	249193	249120	-	Gly	TCC	[ENA]	○
	>W1511345183	JRGG01000003	Bacillota	Clostridium tetani C2 [JRGG]	248496	248423	-	Gly	TCC	[ENA]	○
	>W1511345270	JRGI01000001	Bacillota	Clostridium tetani ATCC 453 [JRGI]	454	527	+	Gly	TCC	[ENA]	○
	>W1511345315	JRGI01000040	Bacillota	Clostridium tetani ATCC 453 [JRGI]	160	87	-	Gly	TCC	[ENA]	○
	>W1511345329	JRGJ01000006	Bacillota	Clostridium tetani ATCC 19406 [JRGJ]	248509	248436	-	Gly	TCC	[ENA]	○
	>W1511345362	JRGJ01000043	Bacillota	Clostridium tetani ATCC 19406 [JRGJ]	160	87	-	Gly	TCC	[ENA]	○
	>W1511480236	JWIX01000027	Bacillota	Clostridium tetani A [JWIX]	163820	163747	-	Gly	TCC	[ENA]	○
	>W1511480244	JWIX01000027	Bacillota	Clostridium tetani A [JWIX]	163123	163050	-	Gly	TCC	[ENA]	○
	>W1610925100	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4005	4078	+	Gly	TCC	[ENA]	○
	>W1610925103	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4330	4403	+	Gly	TCC	[ENA]	○
	>W1610925107	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	4739	4812	+	Gly	TCC	[ENA]	○
	>W1610925113	LTBA01000036	Bacillota	Clostridium tepidiprofundi DSM 19306 [LTBA]	5356	5429	+	Gly	TCC	[ENA]	○
	>W1710082604	BDHH01000020	Bacillota	Fusibacter sp. 3D3 [BDHH]	2147	2220	+	Gly	TCC	[ENA]	○
	>W1710521494	FNGL01000002	Bacillota	Clostridium cochlearium [FNGL]	145225	145298	+	Gly	TCC	[ENA]	○
	>W1710586985	FQXP01000019	Bacillota	Clostridium collagenovorans DSM 3089 [FQXP]	249	322	+	Gly	TCC	[ENA]	○
	>W1710600746	FUWT01000004	Bacillota	Clostridium tetani [FUWT]	22	95	+	Gly	TCC	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK