Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.426829 (87 seq.) |
|
>W1710864618 |
LMFZ01000050 |
Betaproteobacteria |
Duganella sp. Root1480D1 [LMFZ] |
553 |
480 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1710892688 |
LNDZ01000032 |
Betaproteobacteria |
Betaproteobacteria bacterium Ga0074130 [LNDZ] |
80009 |
80082 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1710925686 |
LODL01000019 |
Betaproteobacteria |
Dechloromonas denitrificans [LODL] |
516758 |
516685 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W131046077 |
AMSB01000011 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os34 [AMSB] |
426 |
353 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W131062299 |
ANJR01000031 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
106943 |
106870 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W131160254 |
AQWL01000002 |
Betaproteobacteria |
Thiobacillus denitrificans DSM 12475 [AQWL] |
454348 |
454421 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W131161591 |
AQXU01000025 |
Betaproteobacteria |
Leeia oryzae DSM 17879 [AQXU] |
1413 |
1340 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711386436 |
MEFI01000007 |
Betaproteobacteria |
Thiobacillus sp. SCN 63-1177 [MEFI] |
395 |
322 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711387312 |
MEGN01000001 |
Betaproteobacteria |
Thiobacillus sp. SCN 65-179 [MEGN] |
394 |
321 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711394655 |
MEQN01000009 |
Betaproteobacteria |
Betaproteobacteria bacterium RBG_16_58_11 [MEQN] |
6736 |
6809 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711430700 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
1053546 |
1053473 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711504098 |
MKUF01000015 |
Betaproteobacteria |
Thiobacillus sp. 65-69 [MKUF] |
600956 |
601029 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711504117 |
MKUG01000090 |
Betaproteobacteria |
Thiobacillus sp. 65-1402 [MKUG] |
25977 |
26050 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711506499 |
MKWL01000019 |
Betaproteobacteria |
Thiobacillus sp. 0-1251 [MKWL] |
200775 |
200848 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711506533 |
MKWM01000019 |
Betaproteobacteria |
Thiobacillus sp. 63-78 [MKWM] |
425 |
352 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711506578 |
MKWN01000029 |
Betaproteobacteria |
Thiobacillus sp. 65-29 [MKWN] |
348 |
275 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711718035 |
MTHD01000001 |
Betaproteobacteria |
Azonexus hydrophilus [MTHD] |
459356 |
459429 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1711765096 |
MUXB01000019 |
Betaproteobacteria |
Herbaspirillum sp. VT-16-41 [MUXB] |
53080 |
53007 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1712110285 |
NJGU01000016 |
Betaproteobacteria |
Herbaspirillum robiniae HZ10 [NJGU] |
96453 |
96526 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>C171094890 |
CP019509 |
Betaproteobacteria |
Aquaspirillum sp. LM1 [CP019509] |
215036 |
215109 |
+ |
Gly |
TCC |
- |
¡û |
|
>C007460 |
CP000089 |
Betaproteobacteria |
Dechloromonas aromatica [CP000089] |
347506 |
347579 |
+ |
Gly |
TCC |
[Ensembl] |
¡û |
|
>C025383 |
CP000116 |
Betaproteobacteria |
Thiobacillus denitrificans ATCC 25259 [CP000116] |
419145 |
419218 |
+ |
Gly |
TCC |
[Ensembl] |
¡û |
|
>w028108 |
ABCT01000002 |
Betaproteobacteria |
Limnobacter sp. MED105 [ABCT] |
13349 |
13279 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV180037120 |
FVAA010630154 |
[FVAA] soil metagenome; Soil |
|
72 |
1 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>W141003843 |
AEEC02000036 |
Betaproteobacteria |
Herbaspirillum frisingense GSF30 [AEEC] |
55002 |
55075 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV180109692 |
OAPK01054892 |
[OAPK] marine metagenome; ENVO:00002042 |
|
197 |
124 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180117954 |
OARM01004756 |
[OARM] human gut metagenome; ENVO:feces |
|
209 |
282 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180256335 |
OBEQ010807461 |
[OBEQ] groundwater metagenome; groundwater |
|
202 |
275 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180285216 |
OBID01279765 |
[OBID] metagenome; sludge |
|
223 |
150 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180295745 |
OBIZ01284139 |
[OBIZ] soil metagenome; soil |
|
190 |
263 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180351426 |
OBLQ010055700 |
[OBLQ] soil metagenome; soil |
|
468 |
395 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV180370983 |
OBOI01000049 |
[OBOI] sediment metagenome; sediment |
|
289 |
216 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181169484 |
OEIV010002811 |
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex |
|
254 |
181 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181311230 |
OFJB01000342 |
[OFJB] sludge metagenome; sludge |
|
22630 |
22703 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181311864 |
OFJB01017037 |
[OFJB] sludge metagenome; sludge |
|
1561 |
1634 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181378460 |
OFRB01007846 |
[OFRB] wastewater metagenome; Exp Tend CN 0WW |
|
537 |
464 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181379078 |
OFRC01018746 |
[OFRC] wastewater metagenome; Exp Tend CN 10WW |
|
565 |
492 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181390495 |
OFRO01055275 |
[OFRO] wastewater metagenome; Exp Tend NO 10WW |
|
170 |
97 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181395575 |
OFSA01006776 |
[OFSA] freshwater metagenome; Freshwater Lake |
|
57 |
130 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181415707 |
OGCL01020251 |
[OGCL] hot springs metagenome; Hot spring water |
|
330 |
257 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV181834817 |
OGVG01001275 |
[OGVG] freshwater metagenome; freshwater |
|
866 |
793 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>W141223407 |
BADF01000432 |
Betaproteobacteria |
Herbaspirillum sp. B39 [BADF] |
205 |
278 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W141223505 |
BADI01000794 |
Betaproteobacteria |
Herbaspirillum sp. B65 [BADI] |
1858 |
1785 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W141223542 |
BADJ01000933 |
Betaproteobacteria |
Herbaspirillum sp. B501 [BADJ] |
155 |
228 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV182540650 |
OJAO01000579 |
[OJAO] seawater metagenome; Sea water |
|
1583 |
1510 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV182586742 |
OJHK01004085 |
[OJHK] seawater metagenome; Sea water |
|
1638 |
1711 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>W141277639 |
JAET01000001 |
Betaproteobacteria |
Dechloromonas agitata is5 [JAET] |
533857 |
533784 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV183703387 |
PDVJ01011818 |
[PDVJ] alkali sediment metagenome; glacial lake sediment |
|
305 |
378 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV183703419 |
PDVJ01013299 |
[PDVJ] alkali sediment metagenome; glacial lake sediment |
|
577 |
650 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170164877 |
CEON01038207 |
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
563 |
636 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170165252 |
CEON01096413 |
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
327 |
254 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170201430 |
CEPQ01019873 |
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
261 |
188 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170201643 |
CEPQ01041308 |
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
322 |
249 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170243951 |
CEQO01268505 |
[CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
719 |
792 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170365759 |
CETN01160369 |
[CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
261 |
188 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170573163 |
FLYJ01002197 |
[FLYJ] hot springs metagenome; Sediment |
|
1708 |
1781 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170639352 |
JFJP01002028 |
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink |
|
25549 |
25622 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170653507 |
JRYJ01002963 |
[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated |
|
10353 |
10426 |
+ |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170689340 |
LFRM01289598 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
600 |
527 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>WENV170838814 |
MDSZ01174924 |
[MDSZ] marine metagenome; seawater |
|
1365 |
1292 |
- |
Gly |
TCC |
[ENA] |
¢þ |
|
>C181163946 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
6145540 |
6145467 |
- |
Gly |
TCC |
- |
¡û |
|
>C191081640 |
CP031842 |
Betaproteobacteria |
Dechloromonas sp. HYN0024 [CP031842] |
313011 |
313084 |
+ |
Gly |
TCC |
- |
¡û |
|
>C191124223 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
114871 |
114944 |
+ |
Gly |
TCC |
- |
¡û |
|
>C191150812 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
6539820 |
6539747 |
- |
Gly |
TCC |
- |
¡û |
|
>C191173968 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
5333783 |
5333856 |
+ |
Gly |
TCC |
- |
¡û |
|
>W09101596 |
AAFH01000008 |
Betaproteobacteria |
Thiobacillus denitrificans ATCC 25259 [AAFH] |
18622 |
18549 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>C141001506 |
CP003468 |
Betaproteobacteria |
Candidatus Profftella armatura DC [CP003468] |
14676 |
14749 |
+ |
Gly |
TCC |
[Ensembl] |
¡û |
|
>W1910577882 |
JUGD01000045 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os38 [JUGD] |
14861 |
14934 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1910578312 |
JWJC01000017 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os44 [JWJC] |
432 |
359 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1910785821 |
MQVZ01000001 |
Betaproteobacteria |
Limnobacter sp. SAORIC-690 SAORIC-690 [MQVZ] |
1358062 |
1358135 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1911740767 |
QUSW01000013 |
Betaproteobacteria |
Albitalea terrae S-16 [QUSW] |
30670 |
30743 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1810005519 |
BFBP01000024 |
Betaproteobacteria |
Azospira sp. I13 [BFBP] |
73775 |
73848 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>SRA1001574 |
SRR001072.21548 |
Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160) |
|
10 |
83 |
+ |
Gly |
TCC |
[SRA] |
|
|
>W1810194058 |
PKOI01000018 |
Betaproteobacteria |
Herbaspirillum sp. BH-1 [PKOI] |
26749 |
26822 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1810195601 |
PKRR01000003 |
Betaproteobacteria |
Uliginosibacterium sp. TH139 [PKRR] |
97770 |
97697 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>C151087558 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
110152 |
110225 |
+ |
Gly |
TCC |
[Ensembl] |
¡û |
|
>C151095954 |
CP012591 |
Betaproteobacteria |
Candidatus Profftella armatura YCPA [CP012591] |
14676 |
14749 |
+ |
Gly |
TCC |
- |
¡û |
|
>W11114405 |
ADDK02000001 |
Betaproteobacteria |
Azospira oryzae PS [ADDK] |
1157390 |
1157317 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV056168 |
AACY023249847 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
356 |
429 |
+ |
Gly |
TCC |
[ENA] |
|
|
>C161060431 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
127548 |
127621 |
+ |
Gly |
TCC |
[Ensembl] |
¡û |
|
>WENV061679 |
AACY023437260 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
830 |
903 |
+ |
Gly |
TCC |
[ENA] |
|
|
>W1610071852 |
BCUJ01000018 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
280 |
207 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1610726964 |
LMFZ01000050 |
Betaproteobacteria |
Duganella sp. Root1480D1 [LMFZ] |
553 |
480 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>W1610752954 |
LNDZ01000032 |
Betaproteobacteria |
Betaproteobacteria bacterium Ga0074130 [LNDZ] |
80009 |
80082 |
+ |
Gly |
TCC |
[ENA] |
¡û |
|
>W1610783332 |
LODL01000019 |
Betaproteobacteria |
Dechloromonas denitrificans [LODL] |
516758 |
516685 |
- |
Gly |
TCC |
[ENA] |
¡û |
|
>WENV080165 |
AATO01010583 |
Wastewater EBPR microbial communities from Bioreactor (USA sludge) |
|
205 |
132 |
- |
Gly |
TCC |
[ENA] |
|
|
>W1710069054 |
BCUJ01000018 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
280 |
207 |
- |
Gly |
TCC |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |