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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.432426 (269 seq.)
>W1710777592
LJBS01000027
Bacillota
Pediococcus acidilactici [LJBS]
525
598
+
Trp
CCA
[ENA]
¡û
>W1710909083
LNQD01000056
Bacillota
Lacticaseibacillus paracasei casei [LNQD]
17921
17850
-
Trp
CCA
[ENA]
¡û
>W1710979252
LPNV01000029
Bacillota
Lacticaseibacillus rhamnosus [LPNV]
2836
2907
+
Trp
CCA
[ENA]
¡û
>W1710979312
LPNW01000055
Bacillota
Lacticaseibacillus rhamnosus [LPNW]
2197
2268
+
Trp
CCA
[ENA]
¡û
>W131062385
ANJT01000144
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp229 [ANJT]
12362
12291
-
Trp
CCA
[ENA]
¡û
>W131062480
ANJV01000369
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp7 [ANJV]
664
593
-
Trp
CCA
[ENA]
¡û
>W131062642
ANJZ01000167
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp14 [ANJZ]
19192
19121
-
Trp
CCA
[ENA]
¡û
>W131062703
ANKA01000065
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp228 [ANKA]
12372
12301
-
Trp
CCA
[ENA]
¡û
>W131062732
ANKB01000064
Bacillota
Lacticaseibacillus paracasei subsp. tolerans Lpl14 [ANKB]
395
466
+
Trp
CCA
[ENA]
¡û
>W131063032
ANKI01000091
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp43 [ANKI]
7344
7273
-
Trp
CCA
[ENA]
¡û
>W131063135
ANKL01000276
Bacillota
Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648 [ANKL]
90
161
+
Trp
CCA
[ENA]
¡û
>W131063192
ANKM01000073
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp125 [ANKM]
12363
12292
-
Trp
CCA
[ENA]
¡û
>W131063751
ANLF01000292
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp70 [ANLF]
1459
1530
+
Trp
CCA
[ENA]
¡û
>W131064728
ANMI01000147
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp22 [ANMI]
534
463
-
Trp
CCA
[ENA]
¡û
>W131064820
ANMK01000047
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp120 [ANMK]
1739
1810
+
Trp
CCA
[ENA]
¡û
>W131064863
ANML01000037
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp223 [ANML]
552
481
-
Trp
CCA
[ENA]
¡û
>W131064934
ANMM01000033
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp225 [ANMM]
12360
12289
-
Trp
CCA
[ENA]
¡û
>W131064966
ANMN01000006
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp226 [ANMN]
12363
12292
-
Trp
CCA
[ENA]
¡û
>W1711091987
LTDP01000157
Bacillota
Lacticaseibacillus paracasei casei [LTDP]
7430
7359
-
Trp
CCA
[ENA]
¡û
>W131156311
AQPP01000007
Bacillota
Lacticaseibacillus paracasei LcA [AQPP]
1738
1809
+
Trp
CCA
[ENA]
¡û
>W1711097130
LTIK01000008
Bacillota
Lactobacillus sp. HMSC078F07 [LTIK]
13042
12971
-
Trp
CCA
[ENA]
¡û
>W1711097857
LTJB01000119
Bacillota
Lactobacillus sp. HMSC064F12 [LTJB]
13042
12971
-
Trp
CCA
[ENA]
¡û
>W1711109712
LTUW01000092
Bacillota
Lactobacillus sp. HMSC056D05 [LTUW]
1931
2002
+
Trp
CCA
[ENA]
¡û
>W1711109847
LTVA01000004
Bacillota
Lactobacillus sp. HMSC075D02 [LTVA]
13049
12978
-
Trp
CCA
[ENA]
¡û
>W1711110879
LTVY01000112
Bacillota
Lactobacillus sp. HMSC073B09 [LTVY]
13052
12981
-
Trp
CCA
[ENA]
¡û
>W1711113091
LTXZ01000003
Bacillota
Lactobacillus sp. HMSC061B07 [LTXZ]
13037
12966
-
Trp
CCA
[ENA]
¡û
>W1711172153
LWBT01000040
Bacillota
Lacticaseibacillus rhamnosus [LWBT]
13006
12935
-
Trp
CCA
[ENA]
¡û
>W1711185667
LWNO01000121
Bacillota
Lactobacillus sp. HMSC17G08 [LWNO]
40
111
+
Trp
CCA
[ENA]
¡û
>W1711187450
LWPM01000116
Bacillota
Lactobacillus sp. HMSC25A02 [LWPM]
7388
7317
-
Trp
CCA
[ENA]
¡û
>W131204295
ATBI01000022
Bacillota
Lacticaseibacillus rhamnosus CRL1505 [ATBI]
5051
5122
+
Trp
CCA
[ENA]
¡û
>W1711339117
MBTZ01000075
Bacillota
Lacticaseibacillus paracasei [MBTZ]
1773
1844
+
Trp
CCA
[ENA]
¡û
>W131239169
BANK01000004
Bacillota
Pediococcus acidilactici NGRI 0510Q [BANK]
125842
125769
-
Trp
CCA
[ENA]
¡û
>W1711487439
MKFZ01000072
Bacillota
Lacticaseibacillus paracasei [MKFZ]
3240
3169
-
Trp
CCA
[ENA]
¡û
>W1711487489
MKGA01000124
Bacillota
Lacticaseibacillus paracasei [MKGA]
3132
3061
-
Trp
CCA
[ENA]
¡û
>W1711517957
MLKC01000013
Bacillota
Lacticaseibacillus rhamnosus [MLKC]
2202
2273
+
Trp
CCA
[ENA]
¡û
>W1711585762
MOAB01000001
Bacillota
Pediococcus acidilactici [MOAB]
340652
340724
+
Trp
CCA
[ENA]
¡û
>W1711708116
MSTB01000071
Bacillota
Lacticaseibacillus rhamnosus [MSTB]
208
278
+
Trp
CCA
[ENA]
¡û
>W1711721932
MTJY01000020
Bacillota
Lacticaseibacillus rhamnosus [MTJY]
307
378
+
Trp
CCA
[ENA]
¡û
>W1711961545
NCSN01000019
Bacillota
Lacticaseibacillus paracasei [NCSN]
2572
2643
+
Trp
CCA
[ENA]
¡û
>W1711961657
NCSP01000008
Bacillota
Lacticaseibacillus paracasei [NCSP]
2602
2673
+
Trp
CCA
[ENA]
¡û
>C171030548
CP014201
Bacillota
Lacticaseibacillus rhamnosus BFE5264 [CP014201]
3023301
3023372
+
Trp
CCA
-
¡û
>C171036823
CP015206
Bacillota
Pediococcus acidilactici ZPA017 [CP015206]
632438
632365
-
Trp
CCA
-
¡û
>C171056166
CP017065
Bacillota
Lacticaseibacillus casei LC5 [CP017065]
783489
783560
+
Trp
CCA
-
¡û
>C171108318
CP020464
Bacillota
Lacticaseibacillus rhamnosus Pen [CP020464]
2296701
2296630
-
Trp
CCA
-
¡û
>C171118789
CP021426
Bacillota
Lacticaseibacillus rhamnosus 4B15 [CP021426]
551624
551553
-
Trp
CCA
-
¡û
>C171119462
CP021474
Bacillota
Pediococcus pentosaceus SRCM100892 [CP021474]
624312
624385
+
Trp
CCA
-
¡û
>C171119611
CP021484
Bacillota
Pediococcus acidilactici SRCM100424 [CP021484]
1342748
1342675
-
Trp
CCA
-
¡û
>C171126480
CP021927
Bacillota
Pediococcus pentosaceus SRCM100194 [CP021927]
613747
613820
+
Trp
CCA
-
¡û
>C011458
CP000423
Bacillota
Lacticaseibacillus paracasei ATCC 334 [CP000423]
830689
830759
+
Trp
CCA
[Ensembl]
¡û
>C017450
CP000422
Bacillota
Pediococcus pentosaceus ATCC 25745 [CP000422]
1209978
1209905
-
Trp
CCA
[Ensembl]
¡û
>W141004335
AFYJ01000008
Bacillota
Lacticaseibacillus casei 12A [AFYJ]
2450
2521
+
Trp
CCA
[ENA]
¡û
>W141004499
AFYM01000022
Bacillota
Lacticaseibacillus casei A2-362 [AFYM]
2174
2245
+
Trp
CCA
[ENA]
¡û
>W141004555
AFYN01000015
Bacillota
Lacticaseibacillus paracasei CRF28 [AFYN]
2303
2374
+
Trp
CCA
[ENA]
¡û
>W141004664
AFYP01000019
Bacillota
Lacticaseibacillus paracasei T71499 [AFYP]
2306
2377
+
Trp
CCA
[ENA]
¡û
>W141004720
AFYQ01000037
Bacillota
Lacticaseibacillus paracasei UCD174 [AFYQ]
2124
2195
+
Trp
CCA
[ENA]
¡û
>W141004885
AFYT01000014
Bacillota
Lacticaseibacillus paracasei Lc-10 [AFYT]
2686
2757
+
Trp
CCA
[ENA]
¡û
>W141004941
AFYU01000033
Bacillota
Lacticaseibacillus paracasei Lpc-37 [AFYU]
1840
1911
+
Trp
CCA
[ENA]
¡û
>WENV180129083
OATB01032407
[OATB] human gut metagenome; faeces
127
198
+
Trp
CCA
[ENA]
¢þ
>WENV180133173
OATI01009927
[OATI] human gut metagenome; faeces
188
117
-
Trp
CCA
[ENA]
¢þ
>WENV180172280
OAVX01000686
[OAVX] human gut metagenome; faeces
12448
12377
-
Trp
CCA
[ENA]
¢þ
>WENV180172962
OAVY01000177
[OAVY] human gut metagenome; faeces
13116
13045
-
Trp
CCA
[ENA]
¢þ
>WENV180181826
OAWN01005684
[OAWN] human gut metagenome; faeces
17
88
+
Trp
CCA
[ENA]
¢þ
>WENV180184020
OAWR01000278
[OAWR] human gut metagenome; faeces
59
130
+
Trp
CCA
[ENA]
¢þ
>WENV180349796
OBLO01121383
[OBLO] metagenome; feces
103
176
+
Trp
CCA
[ENA]
¢þ
>WENV180407275
OBUQ01000823
[OBUQ] human gut metagenome; faeces
12427
12356
-
Trp
CCA
[ENA]
¢þ
>WENV180411404
OBUY01026566
[OBUY] human gut metagenome; faeces
85
14
-
Trp
CCA
[ENA]
¢þ
>WENV180438812
OBWS01001101
[OBWS] human gut metagenome; faeces
59
130
+
Trp
CCA
[ENA]
¢þ
>WENV180442262
OBWW01025956
[OBWW] human gut metagenome; faeces
536
607
+
Trp
CCA
[ENA]
¢þ
>WENV180442564
OBWX01000193
[OBWX] human gut metagenome; faeces
13768
13697
-
Trp
CCA
[ENA]
¢þ
>WENV180444251
OBWZ01000373
[OBWZ] human gut metagenome; faeces
1953
2024
+
Trp
CCA
[ENA]
¢þ
>WENV180468180
OBYJ01000803
[OBYJ] human gut metagenome; faeces
12414
12343
-
Trp
CCA
[ENA]
¢þ
>WENV180476670
OBYY01004352
[OBYY] human gut metagenome; faeces
59
130
+
Trp
CCA
[ENA]
¢þ
>WENV180483643
OBZH01001479
[OBZH] human gut metagenome; faeces
13575
13504
-
Trp
CCA
[ENA]
¢þ
>W141047299
AMQW01000030
Bacillota
Lacticaseibacillus rhamnosus LRHMDP2 [AMQW]
208
279
+
Trp
CCA
[ENA]
¡û
>WENV180492238
OBZW01000773
[OBZW] human gut metagenome; faeces
12429
12358
-
Trp
CCA
[ENA]
¢þ
>WENV180494038
OBZZ01003277
[OBZZ] human gut metagenome; faeces
977
1048
+
Trp
CCA
[ENA]
¢þ
>WENV180598571
OCPM01019662
[OCPM] human gut metagenome; faeces
210
139
-
Trp
CCA
[ENA]
¢þ
>W08010422
ABQV01000065
Bacillota
Lacticaseibacillus paracasei subsp. paracasei 8700:2 [ABQV]
12451
12380
-
Trp
CCA
[ENA]
¡û
>W141202675
AZHJ01000047
Bacillota
Lacticaseibacillus rhamnosus LR231 [AZHJ]
2280
2351
+
Trp
CCA
[ENA]
¡û
>W141207960
AZOE01000055
Bacillota
Lacticaseibacillus casei A2-362 [AZOE]
12715
12644
-
Trp
CCA
[ENA]
¡û
>W141224157
BAGT01000045
Bacillota
Lacticaseibacillus paracasei COM0101 [BAGT]
550
479
-
Trp
CCA
[ENA]
¡û
>W141228234
BALT01000041
Bacillota
Lacticaseibacillus rhamnosus JCM 1136 [BALT]
1746
1817
+
Trp
CCA
[ENA]
¡û
>WENV182601392
OJJI01015192
[OJJI] metagenome; faeces
289
218
-
Trp
CCA
[ENA]
¢þ
>WENV182804503
OJUV01000110
[OJUV] human gut metagenome; human gut
13063
12992
-
Trp
CCA
[ENA]
¢þ
>WENV182805047
OJVB01002103
[OJVB] human gut metagenome; human gut
808
737
-
Trp
CCA
[ENA]
¢þ
>WENV182820034
OKAI01000115
[OKAI] human gut metagenome; human gut
58
129
+
Trp
CCA
[ENA]
¢þ
>WENV182820138
OKAK01000422
[OKAK] human gut metagenome; human gut
1353
1282
-
Trp
CCA
[ENA]
¢þ
>WENV182830655
OKDZ01001156
[OKDZ] human gut metagenome; human gut
1362
1433
+
Trp
CCA
[ENA]
¢þ
>WENV182831709
OKEG01000239
[OKEG] human gut metagenome; human gut
58
129
+
Trp
CCA
[ENA]
¢þ
>WENV182832062
OKEJ01000187
[OKEJ] human gut metagenome; human gut
7409
7338
-
Trp
CCA
[ENA]
¢þ
>WENV182855214
OKMY01000410
[OKMY] human gut metagenome; human gut
13063
12992
-
Trp
CCA
[ENA]
¢þ
>WENV182861368
OKPE01000869
[OKPE] human gut metagenome; human gut
1779
1708
-
Trp
CCA
[ENA]
¢þ
>WENV182941284
OKVG01000947
[OKVG] human gut metagenome; human gut
1869
1940
+
Trp
CCA
[ENA]
¢þ
>WENV183064291
OLIH01003211
[OLIH] metagenome; faeces
1083
1154
+
Trp
CCA
[ENA]
¢þ
>WENV183105145
OLNK01011257
[OLNK] human gut metagenome; faeces
1028
1099
+
Trp
CCA
[ENA]
¢þ
>WENV183121739
OLNV01002385
[OLNV] human gut metagenome; faeces
21
92
+
Trp
CCA
[ENA]
¢þ
>WENV183131382
OLOA01033426
[OLOA] human gut metagenome; faeces
442
371
-
Trp
CCA
[ENA]
¢þ
>C08005878
FM177140
Bacillota
Lacticaseibacillus paracasei BL23 [FM177140]
893212
893283
+
Trp
CCA
[Ensembl]
¡û
>WENV183762427
PPYE01275843
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
13104
13031
-
Trp
CCA
[ENA]
¢þ
>WENV183764187
PPYE01318944
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
466
537
+
Trp
CCA
[ENA]
¢þ
>W141383502
JDFR01000039
Bacillota
Lacticaseibacillus rhamnosus PEL6 [JDFR]
13191
13120
-
Trp
CCA
[ENA]
¡û
>C181005429
CP006804
Bacillota
Lacticaseibacillus rhamnosus DSM 14870 [CP006804]
2601577
2601648
+
Trp
CCA
-
¡û
>W09101468
AAEV01000008
Bacillota
Pediococcus pentosaceus ATCC 25745 [AAEV]
67532
67459
-
Trp
CCA
[ENA]
¡û
>C181019560
CP016355
Bacillota
Lacticaseibacillus paracasei subsp. paracasei TMW 1.1434 [CP016355]
958225
958296
+
Trp
CCA
-
¡û
>C181023009
CP017063
Bacillota
Lacticaseibacillus rhamnosus LR5 [CP017063]
765897
765968
+
Trp
CCA
-
¡û
>C181025047
CP017261
Bacillota
Lacticaseibacillus paracasei FAM18149 [CP017261]
408797
408868
+
Trp
CCA
-
¡û
>C181037352
CP019305
Bacillota
Lacticaseibacillus rhamnosus SCT-10-10-60 [CP019305]
820141
820212
+
Trp
CCA
-
¡û
>W09125981
ACIZ01000010
Bacillota
Lacticaseibacillus rhamnosus LMS2-1 [ACIZ]
13006
12935
-
Trp
CCA
[ENA]
¡û
>C181119614
CP025582
Bacillota
Lacticaseibacillus paracasei HD1.7 [CP025582]
891671
891742
+
Trp
CCA
-
¡û
>C181127725
CP026097
Bacillota
Lacticaseibacillus paracasei HDS-01 [CP026097]
891341
891412
+
Trp
CCA
-
¡û
>C181183708
CP029686
Bacillota
Lacticaseibacillus paracasei Lpc10 [CP029686]
645432
645361
-
Trp
CCA
-
¡û
>C181198792
CP031290
Bacillota
Lacticaseibacillus rhamnosus GG [CP031290]
830083
830154
+
Trp
CCA
-
¡û
>C191019453
CP022109
Bacillota
Lacticaseibacillus rhamnosus ATCC 11443 [CP022109]
820141
820212
+
Trp
CCA
-
¡û
>C191035369
CP025471
Bacillota
Pediococcus acidilactici PB22 [CP025471]
1280498
1280425
-
Trp
CCA
-
¡û
>C191035757
CP025499
Bacillota
Lacticaseibacillus paracasei subsp. tolerans AO356 [CP025499]
877910
877981
+
Trp
CCA
-
¡û
>C191092776
CP032637
Bacillota
Lacticaseibacillus paracasei ZFM54 [CP032637]
1049068
1048997
-
Trp
CCA
-
¡û
>C191106195
CP033438
Bacillota
Pediococcus acidilactici ATCC 8042 [CP033438]
787746
787819
+
Trp
CCA
-
¡û
>C191135607
CP035151
Bacillota
Pediococcus acidilactici SRCM103367 [CP035151]
1180656
1180583
-
Trp
CCA
-
¡û
>C191144718
CP035563
Bacillota
Lacticaseibacillus paracasei SRCM103299 [CP035563]
907180
907251
+
Trp
CCA
-
¡û
>C191182652
CP040780
Bacillota
Lacticaseibacillus rhamnosus 1.0320 [CP040780]
1273824
1273895
+
Trp
CCA
-
¡û
>C191207091
LR134331
Bacillota
Lacticaseibacillus rhamnosus NCTC13764 [LR134331]
820141
820212
+
Trp
CCA
-
¡û
>W141713235
JMSI01000013
Bacillota
Lacticaseibacillus rhamnosus 51B [JMSI]
13005
12934
-
Trp
CCA
[ENA]
¡û
>W1910177095
BJDM01000010
Bacillota
Paucilactobacillus kaifaensis 778-3 [BJDM]
64877
64806
-
Trp
CCA
[ENA]
¡û
>W1910181683
BJMF01000017
Bacillota
Pediococcus acidilactici NBRC 12231 [BJMF]
16195
16122
-
Trp
CCA
[ENA]
¡û
>C141009519
CP006854
Bacillota
Pediococcus pentosaceus SL4 [CP006854]
1173923
1173850
-
Trp
CCA
[Ensembl]
¡û
>W1910500728
FXZN01000021
Bacillota
Lacticaseibacillus zeae casei [FXZN]
13561
13490
-
Trp
CCA
[ENA]
¡û
>W1910583933
JXRJ01000115
Bacillota
Lacticaseibacillus paracasei INF 448 [JXRJ]
691
620
-
Trp
CCA
[ENA]
¡û
>W1910612609
LGIY01000040
Bacillota
Lacticaseibacillus paracasei CCC B1205 [LGIY]
12609
12538
-
Trp
CCA
[ENA]
¡û
>W1910621240
LKFD01000005
Bacillota
Lacticaseibacillus paracasei FAM18099 [LKFD]
6979
7050
+
Trp
CCA
[ENA]
¡û
>W1910621515
LKFI01000025
Bacillota
Lacticaseibacillus paracasei FAM18113 [LKFI]
2116
2187
+
Trp
CCA
[ENA]
¡û
>W1910621570
LKFJ01000028
Bacillota
Lacticaseibacillus paracasei FAM18119 [LKFJ]
1992
2063
+
Trp
CCA
[ENA]
¡û
>W1910621622
LKFK01000013
Bacillota
Lacticaseibacillus paracasei FAM18121 [LKFK]
255367
255438
+
Trp
CCA
[ENA]
¡û
>W1910621787
LKFN01000064
Bacillota
Lacticaseibacillus paracasei FAM18126 [LKFN]
1993
2064
+
Trp
CCA
[ENA]
¡û
>W1910621841
LKFO01000044
Bacillota
Lacticaseibacillus paracasei FAM18129 [LKFO]
2091
2162
+
Trp
CCA
[ENA]
¡û
>W1910621948
LKFQ01000025
Bacillota
Lacticaseibacillus paracasei FAM18133 [LKFQ]
1992
2063
+
Trp
CCA
[ENA]
¡û
>W1910622112
LKFT01000023
Bacillota
Lacticaseibacillus paracasei FAM18168 [LKFT]
1992
2063
+
Trp
CCA
[ENA]
¡û
>W1910622165
LKFU01000044
Bacillota
Lacticaseibacillus paracasei FAM18172 [LKFU]
1838
1909
+
Trp
CCA
[ENA]
¡û
>W1910622217
LKFV01000040
Bacillota
Lacticaseibacillus paracasei FAM18175 [LKFV]
2116
2187
+
Trp
CCA
[ENA]
¡û
>W1910622272
LKFW01000024
Bacillota
Lacticaseibacillus paracasei FAM19317 [LKFW]
1992
2063
+
Trp
CCA
[ENA]
¡û
>W1910622540
LKGB01000022
Bacillota
Lacticaseibacillus paracasei FAM22278 [LKGB]
1993
2064
+
Trp
CCA
[ENA]
¡û
>W1910622698
LKGE01000001
Bacillota
Lacticaseibacillus paracasei FAM3228 [LKGE]
624978
625049
+
Trp
CCA
[ENA]
¡û
>W1910622867
LKGH01000016
Bacillota
Lacticaseibacillus paracasei FAM4067 [LKGH]
1991
2062
+
Trp
CCA
[ENA]
¡û
>W1910623082
LKGL01000031
Bacillota
Lacticaseibacillus paracasei FAM6410 [LKGL]
2070
2141
+
Trp
CCA
[ENA]
¡û
>W1910623182
LKGN01000021
Bacillota
Lacticaseibacillus paracasei FAM8140 [LKGN]
1992
2063
+
Trp
CCA
[ENA]
¡û
>W1910857330
NBVL01000034
Bacillota
Lacticaseibacillus rhamnosus IBL027 [NBVL]
1277
1348
+
Trp
CCA
[ENA]
¡û
>W1910923339
NIGW01000025
Bacillota
Lacticaseibacillus paracasei LMG S-29188 [NIGW]
1775
1846
+
Trp
CCA
[ENA]
¡û
>W1911138935
NOXN01000106
Bacillota
Lacticaseibacillus chiayiensis NRIC 1947 [NOXN]
1627
1557
-
Trp
CCA
[ENA]
¡û
>W1911422808
NXES01000035
Bacillota
Lacticaseibacillus paracasei B3 [NXES]
12745
12674
-
Trp
CCA
[ENA]
¡û
>W1911422863
NXET01000039
Bacillota
Lacticaseibacillus paracasei B2 [NXET]
12745
12674
-
Trp
CCA
[ENA]
¡û
>W1911422921
NXEU01000016
Bacillota
Lacticaseibacillus rhamnosus B1 [NXEU]
13474
13403
-
Trp
CCA
[ENA]
¡û
>W1911422974
NXEV01000037
Bacillota
Lacticaseibacillus rhamnosus P5 [NXEV]
13605
13534
-
Trp
CCA
[ENA]
¡û
>W1911423029
NXEW01000037
Bacillota
Lacticaseibacillus rhamnosus P4 [NXEW]
13605
13534
-
Trp
CCA
[ENA]
¡û
>W1911423084
NXEX01000036
Bacillota
Lacticaseibacillus rhamnosus P3 [NXEX]
13605
13534
-
Trp
CCA
[ENA]
¡û
>W1911587101
PJQS01000005
Bacillota
Lacticaseibacillus rhamnosus LR-B2 [PJQS]
1845
1916
+
Trp
CCA
[ENA]
¡û
>W1911587171
PJQT01000028
Bacillota
Lacticaseibacillus rhamnosus LR-CVC [PJQT]
13212
13141
-
Trp
CCA
[ENA]
¡û
>W1911587218
PJQU01000049
Bacillota
Lacticaseibacillus rhamnosus LR-GG-MoProbi [PJQU]
13212
13141
-
Trp
CCA
[ENA]
¡û
>W1911587250
PJQV01000010
Bacillota
Lacticaseibacillus rhamnosus LR-S [PJQV]
13212
13141
-
Trp
CCA
[ENA]
¡û
>W1911631254
PUFB01000004
Bacillota
Pediococcus pentosaceus ATCC 33316 [PUFB]
741
814
+
Trp
CCA
[ENA]
¡û
>W1911631906
PUFK01000064
Bacillota
Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 [PUFK]
1957
2028
+
Trp
CCA
[ENA]
¡û
>W1911676614
QHHM01000001
Bacillota
Lacticaseibacillus paracasei JS1 [QHHM]
2942435
2942506
+
Trp
CCA
[ENA]
¡û
>W1911696859
QNGC01000012
Bacillota
Pediococcus acidilactici GS1 [QNGC]
95249
95176
-
Trp
CCA
[ENA]
¡û
>W1911718238
QQWF01000024
Bacillota
Lacticaseibacillus rhamnosus NRRL B-442 [QQWF]
13185
13114
-
Trp
CCA
[ENA]
¡û
>W1911767472
QXET01000054
Bacillota
Lacticaseibacillus paracasei TJB4 [QXET]
1816
1887
+
Trp
CCA
[ENA]
¡û
>W1911798489
QYRQ01000029
Bacillota
Pediococcus acidilactici WT [QYRQ]
95535
95462
-
Trp
CCA
[ENA]
¡û
>W1810000824
BEWQ01000002
Bacillota
Pediococcus pentosaceus NBRC 3182 [BEWQ]
506
579
+
Trp
CCA
[ENA]
¡û
>W1810084941
PESP01000012
Bacillota
Lacticaseibacillus rhamnosus GR-1 [PESP]
13157
13086
-
Trp
CCA
[ENA]
¡û
>W1810190540
PKJX01000013
Bacillota
Lacticaseibacillus rhamnosus UMB0004 [PKJX]
1826
1897
+
Trp
CCA
[ENA]
¡û
>W1810195060
PKQF01000027
Bacillota
Lacticaseibacillus rhamnosus NRRL B-442 [PKQF]
13185
13114
-
Trp
CCA
[ENA]
¡û
>W1810195117
PKQJ01000057
Bacillota
Lacticaseibacillus paracasei DUP 13076 [PKQJ]
680
609
-
Trp
CCA
[ENA]
¡û
>W1810472532
QAGW01000010
Bacillota
Lacticaseibacillus rhamnosus DS17_11 [QAGW]
1869
1940
+
Trp
CCA
[ENA]
¡û
>W1810472757
QAHA01000024
Bacillota
Lacticaseibacillus rhamnosus DS14_11 [QAHA]
13132
13061
-
Trp
CCA
[ENA]
¡û
>W1810474003
QAHV01000037
Bacillota
Lactobacillus sp. DS15_6 [QAHV]
2020
2091
+
Trp
CCA
[ENA]
¡û
>W1810474166
QAHY01000039
Bacillota
Lactobacillus sp. DS9_6 [QAHY]
12487
12416
-
Trp
CCA
[ENA]
¡û
>W1810488120
QAZD01000083
Bacillota
Lacticaseibacillus casei DS1_13 [QAZD]
1868
1939
+
Trp
CCA
[ENA]
¡û
>W1810488409
QAZI01000035
Bacillota
Lacticaseibacillus rhamnosus DS4_11 [QAZI]
13143
13072
-
Trp
CCA
[ENA]
¡û
>W1810488520
QAZK01000025
Bacillota
Lacticaseibacillus rhamnosus DS13_11 [QAZK]
13132
13061
-
Trp
CCA
[ENA]
¡û
>W1810489420
QAZZ01000038
Bacillota
Lactobacillus sp. DS18_6 [QAZZ]
1866
1937
+
Trp
CCA
[ENA]
¡û
>W1810586892
QFFQ01000026
Bacillota
Lacticaseibacillus rhamnosus LR863 [QFFQ]
2235
2306
+
Trp
CCA
[ENA]
¡û
>W1810706132
QMJV01000063
Bacillota
Lacticaseibacillus paracasei KMB_622 [QMJV]
246
317
+
Trp
CCA
[ENA]
¡û
>W1810907620
QVHW01000039
Bacillota
Lacticaseibacillus paracasei AM33-2AC [QVHW]
1847
1918
+
Trp
CCA
[ENA]
¡û
>C151000797
AP012541
Bacillota
Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]
804720
804791
+
Trp
CCA
[Ensembl]
¡û
>C151000856
AP012544
Bacillota
Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 [AP012544]
656259
656330
+
Trp
CCA
[Ensembl]
¡û
>C151016957
CP007122
Bacillota
Lacticaseibacillus paracasei N1115 [CP007122]
1976748
1976677
-
Trp
CCA
[Ensembl]
¡û
>C151091710
CP012148
Bacillota
Lacticaseibacillus paracasei L9 [CP012148]
895660
895731
+
Trp
CCA
-
¡û
>W1510005510
BAYN01000119
Bacillota
Lacticaseibacillus paracasei NRIC 1917 NRIC1917 [BAYN]
1385
1456
+
Trp
CCA
[ENA]
¡û
>W1510005569
BAYO01000495
Bacillota
Lacticaseibacillus paracasei NRIC 1981 NRIC1981 [BAYO]
1385
1456
+
Trp
CCA
[ENA]
¡û
>W1510022511
CBZU010000001
Bacillota
Lacticaseibacillus rhamnosus BPL15 [CBZU]
13005
12934
-
Trp
CCA
[ENA]
¡û
>C10108232
CP001084
Bacillota
Lacticaseibacillus paracasei Zhang [CP001084]
782193
782264
+
Trp
CCA
[Ensembl]
¡û
>C10108912
AP011548
Bacillota
Lacticaseibacillus rhamnosus GG ATCC 53103 [AP011548]
827648
827719
+
Trp
CCA
-
¡û
>C11112383
CP002616
Bacillota
Lacticaseibacillus paracasei LC2W [CP002616]
895304
895375
+
Trp
CCA
[Ensembl]
¡û
>W1511397839
JTDC01000056
Bacillota
Lacticaseibacillus rhamnosus 116 [JTDC]
2123
2194
+
Trp
CCA
[ENA]
¡û
>W1511435027
JUIH01000099
Bacillota
Lacticaseibacillus rhamnosus Lr108 [JUIH]
1
72
+
Trp
CCA
[ENA]
¡û
>W1511435136
JUIJ01000300
Bacillota
Lacticaseibacillus rhamnosus Lr053 [JUIJ]
1595
1666
+
Trp
CCA
[ENA]
¡û
>W1511435306
JUIO01001288
Bacillota
Lacticaseibacillus rhamnosus Lr140 [JUIO]
1070
999
-
Trp
CCA
[ENA]
¡û
>W1511437350
JUKV01000087
Bacillota
Lacticaseibacillus rhamnosus 988_LRHA [JUKV]
67
138
+
Trp
CCA
[ENA]
¡û
>W1511437668
JULF01000167
Bacillota
Lacticaseibacillus rhamnosus 979_LRHA [JULF]
67
138
+
Trp
CCA
[ENA]
¡û
>W1511438584
JUMO01000032
Bacillota
Lacticaseibacillus rhamnosus 944_LRHA [JUMO]
13207
13136
-
Trp
CCA
[ENA]
¡û
>W1511438639
JUMP01000131
Bacillota
Lacticaseibacillus rhamnosus 943_LRHA [JUMP]
67
138
+
Trp
CCA
[ENA]
¡û
>W1511440966
JUPX01000110
Bacillota
Lacticaseibacillus rhamnosus 870_LRHA [JUPX]
13065
12994
-
Trp
CCA
[ENA]
¡û
>W1511443539
JUTB01000111
Bacillota
Lacticaseibacillus rhamnosus 784_LRHA [JUTB]
66
137
+
Trp
CCA
[ENA]
¡û
>W1511444198
JUTS01000086
Bacillota
Lacticaseibacillus rhamnosus 769_LRHA [JUTS]
67
138
+
Trp
CCA
[ENA]
¡û
>W1511446176
JUWQ01000130
Bacillota
Lacticaseibacillus rhamnosus 699_LRHA [JUWQ]
616
545
-
Trp
CCA
[ENA]
¡û
>W1511451949
JVDP01000004
Bacillota
Lacticaseibacillus rhamnosus 526_LRHA [JVDP]
54
125
+
Trp
CCA
[ENA]
¡û
>W1511460737
JVLT01000027
Bacillota
Lacticaseibacillus rhamnosus 319_LRHA [JVLT]
13071
13000
-
Trp
CCA
[ENA]
¡û
>W1511468241
JVUA01000026
Bacillota
Lacticaseibacillus paracasei 1316.rep2_LPAR [JVUA]
56
127
+
Trp
CCA
[ENA]
¡û
>W1511507640
JXNV01000080
Bacillota
Lacticaseibacillus paracasei KL1-Liu [JXNV]
1805
1876
+
Trp
CCA
[ENA]
¡û
>W1511522463
JYBD01000045
Bacillota
Lacticaseibacillus paracasei DSM 20207 [JYBD]
1739
1810
+
Trp
CCA
[ENA]
¡û
>W1511523891
JYCS01000041
Bacillota
Lacticaseibacillus rhamnosus CLS17 [JYCS]
13176
13105
-
Trp
CCA
[ENA]
¡û
>W1511685032
LFNA01000056
Bacillota
Lacticaseibacillus rhamnosus 40f [LFNA]
476
405
-
Trp
CCA
[ENA]
¡û
>W1511685087
LFNB01000038
Bacillota
Lacticaseibacillus rhamnosus 313 [LFNB]
1898
1969
+
Trp
CCA
[ENA]
¡û
>W11176926
AFYD01000146
Bacillota
Lacticaseibacillus rhamnosus CASL [AFYD]
190
261
+
Trp
CCA
[ENA]
¡û
>C121006610
CP003137
Bacillota
Pediococcus claussenii ATCC BAA-344 [CP003137]
779490
779563
+
Trp
CCA
[Ensembl]
¡û
>C161092329
CP015918
Bacillota
Pediococcus pentosaceus wikim20 [CP015918]
861843
861916
+
Trp
CCA
[Ensembl]
¡û
>W121011494
AGKB01000009
Bacillota
Pediococcus acidilactici MA18/5M [AGKB]
172233
172160
-
Trp
CCA
[ENA]
¡û
>W121011564
AGKC01000009
Bacillota
Lacticaseibacillus rhamnosus R0011 [AGKC]
3576
3647
+
Trp
CCA
[ENA]
¡û
>W1610030527
AYTQ01000065
Bacillota
Lacticaseibacillus rhamnosus L31 [AYTQ]
524
453
-
Trp
CCA
[ENA]
¡û
>W1610030574
AYTR01000016
Bacillota
Lacticaseibacillus rhamnosus L34 [AYTR]
13133
13062
-
Trp
CCA
[ENA]
¡û
>W1610030901
AYYJ01000285
Bacillota
Lacticaseibacillus paracasei subsp. tolerans DSM 20258 [AYYJ]
27
98
+
Trp
CCA
[ENA]
¡û
>W1610033231
AZCT01000029
Bacillota
Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]
1116
1187
+
Trp
CCA
[ENA]
¡û
>W1610037803
AZGH01000053
Bacillota
Lacticaseibacillus paracasei subsp. paracasei DSM 5622 [AZGH]
1547
1618
+
Trp
CCA
[ENA]
¡û
>C131015418
CP005484
Bacillota
Lacticaseibacillus rhamnosus LOCK900 [CP005484]
758030
758101
+
Trp
CCA
[Ensembl]
¡û
>C131015476
CP005485
Bacillota
Lacticaseibacillus rhamnosus LOCK908 [CP005485]
818949
819020
+
Trp
CCA
[Ensembl]
¡û
>W1610528271
JQBB01000009
Bacillota
Pediococcus claussenii [JQBB]
502
575
+
Trp
CCA
[ENA]
¡û
>W1610528418
JQBF01000005
Bacillota
Pediococcus pentosaceus [JQBF]
123504
123431
-
Trp
CCA
[ENA]
¡û
>W1610529478
JQCC01000007
Bacillota
Pediococcus acidilactici [JQCC]
712
785
+
Trp
CCA
[ENA]
¡û
>W1610543290
JTHQ01000049
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1610543533
JTHV01000103
Bacillota
Lacticaseibacillus rhamnosus [JTHV]
2067
2138
+
Trp
CCA
[ENA]
¡û
>W1610543654
JTHX01000033
Bacillota
Lacticaseibacillus rhamnosus [JTHX]
13054
12983
-
Trp
CCA
[ENA]
¡û
>W1610543721
JTHZ01000041
Bacillota
Lacticaseibacillus rhamnosus [JTHZ]
3687
3616
-
Trp
CCA
[ENA]
¡û
>W1610543765
JTIA01000059
Bacillota
Lacticaseibacillus rhamnosus [JTIA]
9425
9354
-
Trp
CCA
[ENA]
¡û
>W1610543887
JTIC01000047
Bacillota
Lacticaseibacillus rhamnosus [JTIC]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1610544264
JTIK01000068
Bacillota
Lacticaseibacillus rhamnosus [JTIK]
8175
8104
-
Trp
CCA
[ENA]
¡û
>W1610544578
JTIQ01000044
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
13015
12944
-
Trp
CCA
[ENA]
¡û
>W1610544633
JTIR01000047
Bacillota
Lacticaseibacillus rhamnosus [JTIR]
2063
2134
+
Trp
CCA
[ENA]
¡û
>W1610544677
JTIS01000335
Bacillota
Lacticaseibacillus rhamnosus [JTIS]
13054
12983
-
Trp
CCA
[ENA]
¡û
>W1610544763
JTIU01000031
Bacillota
Lacticaseibacillus rhamnosus [JTIU]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1610544791
JTIV01000023
Bacillota
Lacticaseibacillus rhamnosus [JTIV]
208
279
+
Trp
CCA
[ENA]
¡û
>W1610544868
JTIW01000057
Bacillota
Lacticaseibacillus rhamnosus [JTIW]
1940
2011
+
Trp
CCA
[ENA]
¡û
>W1610544906
JTIX01000137
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
45716
45645
-
Trp
CCA
[ENA]
¡û
>W1610547380
JUIQ01000018
Bacillota
Lacticaseibacillus rhamnosus [JUIQ]
920
849
-
Trp
CCA
[ENA]
¡û
>W1610641778
LJBS01000027
Bacillota
Pediococcus acidilactici [LJBS]
525
598
+
Trp
CCA
[ENA]
¡û
>W1610650095
LJIU01000006
Bacillota
Pediococcus pentosaceus wikim20 [LJIU]
29117
29044
-
Trp
CCA
[ENA]
¡û
>W1610767442
LNQD01000056
Bacillota
Lacticaseibacillus paracasei casei [LNQD]
17921
17850
-
Trp
CCA
[ENA]
¡û
>W1610926083
LTDP01000157
Bacillota
Lacticaseibacillus paracasei casei [LTDP]
7430
7359
-
Trp
CCA
[ENA]
¡û
>W1610980758
LWBT01000040
Bacillota
Lacticaseibacillus rhamnosus [LWBT]
13006
12935
-
Trp
CCA
[ENA]
¡û
>W1710027650
AYTQ01000065
Bacillota
Lacticaseibacillus rhamnosus L31 [AYTQ]
524
453
-
Trp
CCA
[ENA]
¡û
>W1710027697
AYTR01000016
Bacillota
Lacticaseibacillus rhamnosus L34 [AYTR]
13133
13062
-
Trp
CCA
[ENA]
¡û
>W1710027853
AYYJ01000285
Bacillota
Lacticaseibacillus paracasei subsp. tolerans DSM 20258 [AYYJ]
27
98
+
Trp
CCA
[ENA]
¡û
>W1710030503
AZCT01000029
Bacillota
Lacticaseibacillus zeae DSM 20178 = KCTC 3804 [AZCT]
1116
1187
+
Trp
CCA
[ENA]
¡û
>W1710034842
AZGH01000053
Bacillota
Lacticaseibacillus paracasei subsp. paracasei DSM 5622 [AZGH]
1547
1618
+
Trp
CCA
[ENA]
¡û
>W1710082974
BDIT01000051
Bacillota
Lacticaseibacillus paracasei [BDIT]
1739
1810
+
Trp
CCA
[ENA]
¡û
>W1710629861
JQBB01000009
Bacillota
Pediococcus claussenii [JQBB]
502
575
+
Trp
CCA
[ENA]
¡û
>W1710630008
JQBF01000005
Bacillota
Pediococcus pentosaceus [JQBF]
123504
123431
-
Trp
CCA
[ENA]
¡û
>W1710631068
JQCC01000007
Bacillota
Pediococcus acidilactici [JQCC]
712
785
+
Trp
CCA
[ENA]
¡û
>W1710646421
JTHQ01000049
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1710646664
JTHV01000103
Bacillota
Lacticaseibacillus rhamnosus [JTHV]
2067
2138
+
Trp
CCA
[ENA]
¡û
>W1710646785
JTHX01000033
Bacillota
Lacticaseibacillus rhamnosus [JTHX]
13054
12983
-
Trp
CCA
[ENA]
¡û
>W1710646852
JTHZ01000041
Bacillota
Lacticaseibacillus rhamnosus [JTHZ]
3687
3616
-
Trp
CCA
[ENA]
¡û
>W1710646896
JTIA01000059
Bacillota
Lacticaseibacillus rhamnosus [JTIA]
9425
9354
-
Trp
CCA
[ENA]
¡û
>W1710647018
JTIC01000047
Bacillota
Lacticaseibacillus rhamnosus [JTIC]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1710647395
JTIK01000068
Bacillota
Lacticaseibacillus rhamnosus [JTIK]
8175
8104
-
Trp
CCA
[ENA]
¡û
>W1710647709
JTIQ01000044
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
13015
12944
-
Trp
CCA
[ENA]
¡û
>W1710647764
JTIR01000047
Bacillota
Lacticaseibacillus rhamnosus [JTIR]
2063
2134
+
Trp
CCA
[ENA]
¡û
>W1710647808
JTIS01000335
Bacillota
Lacticaseibacillus rhamnosus [JTIS]
13054
12983
-
Trp
CCA
[ENA]
¡û
>W1710647894
JTIU01000031
Bacillota
Lacticaseibacillus rhamnosus [JTIU]
1742
1813
+
Trp
CCA
[ENA]
¡û
>W1710647922
JTIV01000023
Bacillota
Lacticaseibacillus rhamnosus [JTIV]
208
279
+
Trp
CCA
[ENA]
¡û
>W1710647999
JTIW01000057
Bacillota
Lacticaseibacillus rhamnosus [JTIW]
1940
2011
+
Trp
CCA
[ENA]
¡û
>W1710648037
JTIX01000137
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
45716
45645
-
Trp
CCA
[ENA]
¡û
>W1710650563
JUIQ01000018
Bacillota
Lacticaseibacillus rhamnosus [JUIQ]
920
849
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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