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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.448967 (5 seq.)
>W1711401661
MFQP01000041
Unclassified
Candidatus Magasanikbacteria bacterium RIFOXYA1_FULL_40_8 [MFQP]
1657
1731
+
Trp
CCA
[ENA]
¡û
>W1711401753
MFQS01000024
Unclassified
Candidatus Magasanikbacteria bacterium RIFOXYB1_FULL_40_15 [MFQS]
4
78
+
Trp
CCA
[ENA]
¡û
>W1711401833
MFQU01000041
Unclassified
Candidatus Magasanikbacteria bacterium RIFOXYB2_FULL_40_13 [MFQU]
1797
1871
+
Trp
CCA
[ENA]
¡û
>W1511613958
LCKX01000004
Unclassified
Candidatus Magasanikbacteria bacterium GW2011_GWA2_45_39 bacterium GW2011_GWA2_45_39 [LCKX]
2064
1990
-
Trp
CCA
[ENA]
¡û
>W1511614181
LCLH01000012
Unclassified
Candidatus Magasanikbacteria bacterium GW2011_GWC2_45_8 bacterium GW2011_GWC2_45_8 [LCLH]
11163
11237
+
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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