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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.449001 (3 seq.)
>W1511602080
LBVU01000006
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWB1_39_10 bacterium GW2011_GWB1_39_10 [LBVU]
25328
25400
+
Arg
TCG
[ENA]
¡û
>W1511604972
LBZO01000024
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWA2_40_7 bacterium GW2011_GWA2_40_7 [LBZO]
3958
3886
-
Arg
TCG
[ENA]
¡û
>W1511605685
LCAO01000003
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWA1_41_13b bacterium GW2011_GWA1_41_13b [LCAO]
26454
26526
+
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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