tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45122 (80 seq.)
>W1710808917 LKDZ01000014 Betaproteobacteria Variovorax boronicumulans [LKDZ] 4183 4096 - Ser TGA [ENA] ¡û
>W1710860136 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 196014 196101 + Ser TGA [ENA] ¡û
>W1710861755 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 36666 36751 + Ser TGA [ENA] ¡û
>W1710862496 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 22287 22200 - Ser TGA [ENA] ¡û
>W1710863071 LMEV01000003 Betaproteobacteria Variovorax sp. Root473 [LMEV] 27746 27659 - Ser TGA [ENA] ¡û
>W1710882338 LMTS01000203 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 16107 16194 + Ser TGA [ENA] ¡û
>W1711123827 LUJJ01000018 Betaproteobacteria Variovorax boronicumulans [LUJJ] 126356 126443 + Ser TGA [ENA] ¡û
>W1711143371 LVHG01000063 Betaproteobacteria Variovorax paradoxus [LVHG] 17776 17689 - Ser TGA [ENA] ¡û
>W1711386507 MEFM01000024 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 42560 42647 + Ser TGA [ENA] ¡û
>W1711387485 MEGR01000021 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 42560 42647 + Ser TGA [ENA] ¡û
>W1711506621 MKWO01000019 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 92716 92629 - Ser TGA [ENA] ¡û
>W131174618 ARIP01000036 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 12795 12882 + Ser TGA [ENA] ¡û
>W131180331 ARNA01000040 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 26073 26160 + Ser TGA [ENA] ¡û
>WENV181364811 OFPD01002182 [OFPD] sediment metagenome; Lake sediment 883 797 - Ser TGA [ENA] ¢þ
>WENV181365356 OFPO01001724 [OFPO] sediment metagenome; Lake sediment 96 182 + Ser TGA [ENA] ¢þ
>W141170122 AXXB01000028 Betaproteobacteria Variovorax sp. JGI 0001016-C20 [AXXB] 2360 2273 - Ser TGA [ENA] ¡û
>W141170380 AXXT01000021 Betaproteobacteria Variovorax sp. JGI 0001013-L10 [AXXT] 1102 1015 - Ser TGA [ENA] ¡û
>WENV183735199 PJUA01002590 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 783 868 + Ser TGA [ENA] ¢þ
>WENV183735726 PJUB01000932 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 1020 1105 + Ser TGA [ENA] ¢þ
>WENV183736322 PJUC01000707 [PJUC] soil metagenome; Soil enriched on filter paper 9587 9502 - Ser TGA [ENA] ¢þ
>WENV183741580 PJUG01000086 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 46625 46538 - Ser TGA [ENA] ¢þ
>WENV183742031 PJUH01000085 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 7692 7779 + Ser TGA [ENA] ¢þ
>WENV183744345 PJUK01009276 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 340 254 - Ser TGA [ENA] ¢þ
>WENV170559438 CXWL01123401 [CXWL] groundwater metagenome; biofilm material 1960 1873 - Ser TGA [ENA] ¢þ
>WENV170706420 LNAP01003066 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 9453 9540 + Ser TGA [ENA] ¢þ
>WENV170706526 LNAP01003917 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 14062 13975 - Ser TGA [ENA] ¢þ
>WENV170707037 LNAP01011257 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 13 100 + Ser TGA [ENA] ¢þ
>WENV170708415 LNAP01079571 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 894 807 - Ser TGA [ENA] ¢þ
>WENV171003371 NNBT01007449 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 418 505 + Ser TGA [ENA] ¢þ
>WENV171003597 NNBU01000667 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 19835 19922 + Ser TGA [ENA] ¢þ
>C181078485 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 5886296 5886209 - Ser TGA - ¡û
>C181159385 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 5166800 5166887 + Ser TGA - ¡û
>W09119961 ACEE01000055 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 9124 9037 - Ser TGA [ENA] ¡û
>C141002562 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 4740974 4740887 - Ser TGA [Ensembl] ¡û
>W1910792832 MRCN01000009 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 171779 171692 - Ser TGA [ENA] ¡û
>C09111115 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 4568325 4568238 - Ser TGA [Ensembl] ¡û
>W1911496678 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 1537393 1537480 + Ser TGA [ENA] ¡û
>W1911647352 QAJK01000065 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 67585 67498 - Ser TGA [ENA] ¡û
>W1911709239 QPIB01000043 Betaproteobacteria Xenophilus sp. E41 [QPIB] 400096 400183 + Ser TGA [ENA] ¡û
>W1911775322 QXMN01000023 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 56461 56374 - Ser TGA [ENA] ¡û
>W1810072245 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 2112134 2112047 - Ser TGA [ENA] ¡û
>W1810192701 PKMT01000001 Betaproteobacteria Variovorax sp. RO1 [PKMT] 694574 694661 + Ser TGA [ENA] ¡û
>W1810486687 QAYA01000026 Betaproteobacteria Variovorax sp. GV040 [QAYA] 33342 33427 + Ser TGA [ENA] ¡û
>W1810577529 QEOH01000004 Betaproteobacteria Variovorax sp. GV014 [QEOH] 200920 200833 - Ser TGA [ENA] ¡û
>W1810672558 QJTM01000024 Betaproteobacteria Variovorax sp. GV035 [QJTM] 33342 33427 + Ser TGA [ENA] ¡û
>W1810676126 QKLT01000027 Betaproteobacteria Variovorax sp. GV042 [QKLT] 33342 33427 + Ser TGA [ENA] ¡û
>W1810682496 QKUE01000024 Betaproteobacteria Variovorax sp. GV004 [QKUE] 17464 17379 - Ser TGA [ENA] ¡û
>SRA1014665 SRR023845.250515 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 205 118 - Ser TGA [SRA]
>SRA1015034 SRR023845.428102 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 239 152 - Ser TGA [SRA]
>C11123593 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 5380778 5380691 - Ser TGA [Ensembl] ¡û
>W1511508949 JXQQ01000114 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 16415 16328 - Ser TGA [ENA] ¡û
>W1511555014 JZWI01000030 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 16287 16374 + Ser TGA [ENA] ¡û
>C161073167 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 2938927 2939014 + Ser TGA [Ensembl] ¡û
>W1610072165 BCUS01000051 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 31059 31146 + Ser TGA [ENA] ¡û
>W1610072216 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 286859 286946 + Ser TGA [ENA] ¡û
>W121084977 AKIW01000077 Betaproteobacteria Variovorax sp. CF313 [AKIW] 116187 116100 - Ser TGA [ENA] ¡û
>W1610722482 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 196014 196101 + Ser TGA [ENA] ¡û
>W1610724101 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 36666 36751 + Ser TGA [ENA] ¡û
>W1610724842 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 22287 22200 - Ser TGA [ENA] ¡û
>W1610725417 LMEV01000003 Betaproteobacteria Variovorax sp. Root473 [LMEV] 27746 27659 - Ser TGA [ENA] ¡û
>W1610744264 LMTS01000203 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 16107 16194 + Ser TGA [ENA] ¡û
>W1610954379 LVHG01000063 Betaproteobacteria Variovorax paradoxus [LVHG] 17776 17689 - Ser TGA [ENA] ¡û
>W1710069367 BCUS01000051 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 31059 31146 + Ser TGA [ENA] ¡û
>W1710069418 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 286859 286946 + Ser TGA [ENA] ¡û
>W1710506180 FMUJ01000002 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 17508 17593 + Ser TGA [ENA] ¡û
>W1710517945 FNDR01000004 Betaproteobacteria Variovorax sp. OV700 [FNDR] 124021 123934 - Ser TGA [ENA] ¡û
>W1710530058 FNOL01000035 Betaproteobacteria Variovorax sp. YR634 [FNOL] 23905 23818 - Ser TGA [ENA] ¡û
>W1710531387 FNPM01000017 Betaproteobacteria Variovorax sp. YR266 [FNPM] 40014 40101 + Ser TGA [ENA] ¡û
>W1710534031 FNRO01000003 Betaproteobacteria Variovorax sp. YR216 [FNRO] 617510 617597 + Ser TGA [ENA] ¡û
>W1710538184 FNUI01000031 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 6256 6169 - Ser TGA [ENA] ¡û
>W1710539591 FNVM01000033 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 25632 25719 + Ser TGA [ENA] ¡û
>W1710542732 FNZJ01000013 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 175193 175108 - Ser TGA [ENA] ¡û
>W1710545325 FOBJ01000027 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 25729 25816 + Ser TGA [ENA] ¡û
>W1710554317 FOII01000025 Betaproteobacteria Variovorax sp. OV084 [FOII] 25914 26001 + Ser TGA [ENA] ¡û
>W1710557177 FOKS01000033 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 6242 6155 - Ser TGA [ENA] ¡û
>W1710558173 FOLP01000013 Betaproteobacteria Variovorax sp. OK212 [FOLP] 175193 175108 - Ser TGA [ENA] ¡û
>W1710562293 FOOV01000045 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 6238 6151 - Ser TGA [ENA] ¡û
>W1710571847 FOWG01000001 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 1185431 1185344 - Ser TGA [ENA] ¡û
>W1710572140 FOWL01000016 Betaproteobacteria Variovorax sp. OK605 [FOWL] 152668 152755 + Ser TGA [ENA] ¡û
>W1710573300 FOXJ01000004 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 195907 195994 + Ser TGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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