tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.451870 (95 seq.)
>W1710854630 LLXP01000016 Gammaproteobacteria Pseudomonas chengduensis alcaliphila [LLXP] 15403 15328 - Trp CCA [ENA] ¡û
>W1710872537 LMMB01000020 Gammaproteobacteria Pseudomonas sp. Leaf83 [LMMB] 191 266 + Trp CCA [ENA] ¡û
>W1711081664 LSSW01000011 Gammaproteobacteria Pseudomonas composti [LSSW] 52 127 + Trp CCA [ENA] ¡û
>W1711174174 LWDZ01000008 Gammaproteobacteria Pseudomonas argentinensis [LWDZ] 4874 4949 + Trp CCA [ENA] ¡û
>W1711680608 MRWM01001207 Gammaproteobacteria Pseudomonas sp. BIN4 [MRWM] 150 225 + Trp CCA [ENA] ¡û
>W1711708778 MSXU01000012 Gammaproteobacteria Pseudomonas sp. PA1(2017) [MSXU] 1078 1153 + Trp CCA [ENA] ¡û
>W1711708800 MSXV01000013 Gammaproteobacteria Pseudomonas sp. PA15(2017) [MSXV] 209 284 + Trp CCA [ENA] ¡û
>W1711708863 MSXW01000013 Gammaproteobacteria Pseudomonas sp. PA27(2017) [MSXW] 15698 15623 - Trp CCA [ENA] ¡û
>W1712105957 NIUB01000005 Gammaproteobacteria Pseudomonas oleovorans subsp. oleovorans [NIUB] 167605 167530 - Trp CCA [ENA] ¡û
>C171046187 CP016162 Gammaproteobacteria Pseudomonas alcaliphila JAB1 [CP016162] 4543335 4543260 - Trp CCA - ¡û
>C171060164 CP017290 Gammaproteobacteria Pseudomonas sp. LPH1 [CP017290] 456685 456760 + Trp CCA - ¡û
>C171101428 CP019947 Gammaproteobacteria Pseudomonas sp. CC6-YY-74 [CP019947] 4615249 4615324 + Trp CCA - ¡û
>W131058993 ANGB01000002 Gammaproteobacteria Pseudomonas chengduensis 34 [ANGB] 405861 405786 - Trp CCA [ENA] ¡û
>W131210533 ATKM01000019 Gammaproteobacteria Pseudomonas sp. P818 [ATKM] 679490 679415 - Trp CCA [ENA] ¡û
>C017193 CP000680 Gammaproteobacteria Pseudomonas mendocina [CP000680] 4303608 4303533 - Trp CCA [Ensembl] ¡û
>WENV180310652 OBJT01009746 [OBJT] soil metagenome; soil 1235 1310 + Trp CCA [ENA] ¢þ
>W141041586 AMCD02000001 Gammaproteobacteria Pseudomonas mendocina S5.2 [AMCD] 146464 146389 - Trp CCA [ENA] ¡û
>W141104385 AVOF01000707 Gammaproteobacteria Pseudomonas sp. EGD-AK9 [AVOF] 79 154 + Trp CCA [ENA] ¡û
>W141106882 AVQF01000005 Gammaproteobacteria Pseudomonas chengduensis EGD-AQ5 [AVQF] 158 233 + Trp CCA [ENA] ¡û
>WENV181415421 OGCL01010768 [OGCL] hot springs metagenome; Hot spring water 2540 2465 - Trp CCA [ENA] ¢þ
>W141143691 AWSQ01000010 Gammaproteobacteria Pseudomonas taeanensis MS-3 [AWSQ] 180275 180200 - Trp CCA [ENA] ¡û
>W141217347 AZVM01000022 Gammaproteobacteria Pseudomonas sp. URMO17WK12:I4 [AZVM] 15677 15602 - Trp CCA [ENA] ¡û
>W141217460 AZVO01000018 Gammaproteobacteria Pseudomonas sp. URMO17WK12:I3 [AZVO] 290342 290267 - Trp CCA [ENA] ¡û
>W141242350 CAIG01000018 Gammaproteobacteria Pseudomonas oleovorans CECT 5344 [CAIG] 182008 181933 - Trp CCA [ENA] ¡û
>WENV183743335 PJUJ01000530 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 15435 15360 - Trp CCA [ENA] ¢þ
>WENV183744088 PJUK01000388 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 15435 15360 - Trp CCA [ENA] ¢þ
>WENV183744957 PJUL01000908 [PJUL] feces metagenome; Chicken feces enriched on filter paper 15435 15360 - Trp CCA [ENA] ¢þ
>WENV170340535 CETC01006351 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 228 303 + Trp CCA [ENA] ¢þ
>WENV170356168 CETJ01009653 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 174 + Trp CCA [ENA] ¢þ
>WENV170408201 CEUI01007169 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 174 + Trp CCA [ENA] ¢þ
>WENV170435934 CEUT01007529 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 174 + Trp CCA [ENA] ¢þ
>WENV170443758 CEUX01009780 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 174 + Trp CCA [ENA] ¢þ
>WENV170457933 CEVB01010706 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 101 176 + Trp CCA [ENA] ¢þ
>WENV170520737 CEWF01004665 [CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 174 + Trp CCA [ENA] ¢þ
>W141463630 JFJN01000042 Gammaproteobacteria Pseudomonas composti AD6 [JFJN] 140 215 + Trp CCA [ENA] ¡û
>WENV170965268 MTEU01000113 [MTEU] soil metagenome; naturally attenuated soil 3728 3653 - Trp CCA [ENA] ¢þ
>WENV170965366 MTEU01001261 [MTEU] soil metagenome; naturally attenuated soil 145 220 + Trp CCA [ENA] ¢þ
>W09106304 AAUL01000001 Gammaproteobacteria Pseudomonas mendocina ymp [AAUL] 517857 517782 - Trp CCA [ENA] ¡û
>C181087979 CP023641 Gammaproteobacteria Pseudomonas mendocina MAE1-K [CP023641] 1028042 1028117 + Trp CCA - ¡û
>C181158206 CP027657 Gammaproteobacteria Pseudomonas mendocina NEB698 [CP027657] 3044648 3044723 + Trp CCA - ¡û
>C181202686 CP031606 Gammaproteobacteria Pseudomonas sp. phDV1 [CP031606] 4067925 4067850 - Trp CCA - ¡û
>C191204361 LR134290 Gammaproteobacteria Pseudomonas mendocina NCTC10897 [LR134290] 4436640 4436565 - Trp CCA - ¡û
>W141728800 JNHE01000052 Gammaproteobacteria Pseudomonas oleovorans [JNHE] 15332 15257 - Trp CCA [ENA] ¡û
>W141790600 JOVT01000001 Gammaproteobacteria Pseudomonas mendocina [JOVT] 3575422 3575347 - Trp CCA [ENA] ¡û
>W141809682 JPRQ01000058 Gammaproteobacteria Pseudomonas sp. 1-7 [JPRQ] 4341 4416 + Trp CCA [ENA] ¡û
>W1910743832 MHZM01001433 Gammaproteobacteria Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 [MHZM] 975 1050 + Trp CCA [ENA] ¡û
>W1910743833 MHZM01001433 Gammaproteobacteria Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 [MHZM] 3121 3196 + Trp CCA [ENA] ¡û
>W1910928667 NIQU01000009 Gammaproteobacteria Pseudomonas sediminis PI11 [NIQU] 893 968 + Trp CCA [ENA] ¡û
>W1910928723 NIQV01000028 Gammaproteobacteria Pseudomonas toyotomiensis DSM 26169 [NIQV] 480 555 + Trp CCA [ENA] ¡û
>W1911681289 QJUH01000029 Gammaproteobacteria Pseudomonas sp. FRB 228 P2A [QJUH] 4680 4755 + Trp CCA [ENA] ¡û
>W1911681348 QJUI01000028 Gammaproteobacteria Pseudomonas daroniae P9A [QJUI] 39170 39095 - Trp CCA [ENA] ¡û
>W1911681406 QJUJ01000017 Gammaproteobacteria Pseudomonas daroniae P18A [QJUJ] 4673 4748 + Trp CCA [ENA] ¡û
>W1911681456 QJUK01000029 Gammaproteobacteria Pseudomonas daroniae P23A [QJUK] 4680 4755 + Trp CCA [ENA] ¡û
>W1911681476 QJUL01000006 Gammaproteobacteria Pseudomonas dryadis P6B [QJUL] 167830 167755 - Trp CCA [ENA] ¡û
>W1911681535 QJUM01000003 Gammaproteobacteria Pseudomonas dryadis P26B [QJUM] 267085 267010 - Trp CCA [ENA] ¡û
>W1911681610 QJUN01000010 Gammaproteobacteria Pseudomonas sp. FRB 230 P27B [QJUN] 167379 167304 - Trp CCA [ENA] ¡û
>W1911693814 QLYU01000022 Gammaproteobacteria Pseudomonas sp. MDMC224 [QLYU] 4777 4852 + Trp CCA [ENA] ¡û
>W1911693829 QLYV01000056 Gammaproteobacteria Pseudomonas sp. MDMC216 [QLYV] 1239 1314 + Trp CCA [ENA] ¡û
>W1911693917 QLYW01000086 Gammaproteobacteria Pseudomonas sp. MDMC17 [QLYW] 16491 16416 - Trp CCA [ENA] ¡û
>W1911765680 QXDA01000006 Gammaproteobacteria Pseudomonas oleovorans E1205 [QXDA] 4807 4882 + Trp CCA [ENA] ¡û
>W1810100491 PGLR01000073 Gammaproteobacteria Pseudomonas sp. ZH-FAD [PGLR] 171 246 + Trp CCA [ENA] ¡û
>W1810171839 PJLX01000026 Gammaproteobacteria Pseudomonas sp. YY-1 [PJLX] 83 158 + Trp CCA [ENA] ¡û
>W1810297038 PTLV01000233 Gammaproteobacteria Pseudomonas oleovorans YKJ [PTLV] 82083 82008 - Trp CCA [ENA] ¡û
>W1810484191 QASO01000051 Gammaproteobacteria Pseudomonas indoloxydans JCM 14246 [QASO] 16305 16230 - Trp CCA [ENA] ¡û
>W1810685134 QKZB01000007 Gammaproteobacteria Pseudomonas sp. URMO17WK12:I1 [QKZB] 307 382 + Trp CCA [ENA] ¡û
>C151101412 HG916826 Gammaproteobacteria Pseudomonas oleovorans CECT 5344 CECT5344 [HG916826] 3830223 3830148 - Trp CCA [Ensembl] ¡û
>C151102273 LK391695 Gammaproteobacteria Pseudomonas oleovorans [LK391695] 3840867 3840792 - Trp CCA [Ensembl] ¡û
>W1510014639 BBQC01000017 Gammaproteobacteria Pseudomonas mendocina NBRC 14162 [BBQC] 90 165 + Trp CCA [ENA] ¡û
>W1510015174 BBQO01000020 Gammaproteobacteria Pseudomonas toyotomiensis KF710 [BBQO] 15305 15230 - Trp CCA [ENA] ¡û
>C11117186 CP002727 Gammaproteobacteria Pseudomonas fulva 12-X [CP002727] 701311 701386 + Trp CCA [Ensembl] ¡û
>C11117378 CP002620 Gammaproteobacteria Pseudomonas mendocina NK-01 [CP002620] 4710205 4710130 - Trp CCA [Ensembl] ¡û
>W1511399753 JTFL01000126 Gammaproteobacteria Pseudomonas oleovorans S1 [JTFL] 17159 17234 + Trp CCA [ENA] ¡û
>W1511403789 JTLK01000413 Gammaproteobacteria Pseudomonas mendocina ZWU0006 [JTLK] 15353 15278 - Trp CCA [ENA] ¡û
>C161051497 CP013124 Gammaproteobacteria Pseudomonas mendocina S5.2 [CP013124] 721031 721106 + Trp CCA - ¡û
>W121112417 ALKM01000023 Gammaproteobacteria Pseudomonas mendocina DLHK [ALKM] 15309 15234 - Trp CCA [ENA] ¡û
>WENV007125 AACY020185626 Marine microbial communities from Global Ocean Sampling (GOS) 914 837 - Trp CCA [ENA]
>W1610716907 LLXP01000016 Gammaproteobacteria Pseudomonas chengduensis alcaliphila [LLXP] 15403 15328 - Trp CCA [ENA] ¡û
>W1610734883 LMMB01000020 Gammaproteobacteria Pseudomonas sp. Leaf83 [LMMB] 191 266 + Trp CCA [ENA] ¡û
>W1610920499 LSSW01000011 Gammaproteobacteria Pseudomonas composti [LSSW] 52 127 + Trp CCA [ENA] ¡û
>W1710075564 BCZV01000008 Gammaproteobacteria Pseudomonas alcaliphila NBRC 102411 [BCZV] 4617 4692 + Trp CCA [ENA] ¡û
>W1710075787 BCZZ01000013 Gammaproteobacteria Pseudomonas flavescens NBRC 103044 [BCZZ] 168680 168605 - Trp CCA [ENA] ¡û
>W1710076347 BDAJ01000092 Gammaproteobacteria Pseudomonas oleovorans NBRC 14167 [BDAJ] 59 134 + Trp CCA [ENA] ¡û
>W1710076472 BDAL01000067 Gammaproteobacteria Pseudomonas oleovorans subsp. oleovorans NBRC 13583 [BDAL] 15337 15262 - Trp CCA [ENA] ¡û
>W1710509521 FMXG01000013 Gammaproteobacteria Pseudomonas sp. NFPP33 [FMXG] 147 222 + Trp CCA [ENA] ¡û
>W1710512750 FMZQ01000028 Gammaproteobacteria Pseudomonas chengduensis [FMZQ] 900 975 + Trp CCA [ENA] ¡û
>W1710513498 FNAE01000016 Gammaproteobacteria Pseudomonas alcaliphila [FNAE] 462 537 + Trp CCA [ENA] ¡û
>W1710516737 FNCT01000032 Gammaproteobacteria Pseudomonas benzenivorans [FNCT] 16366 16291 - Trp CCA [ENA] ¡û
>W1710517363 FNDG01000011 Gammaproteobacteria Pseudomonas flavescens [FNDG] 4699 4774 + Trp CCA [ENA] ¡û
>W1710525249 FNJJ01000012 Gammaproteobacteria Pseudomonas guguanensis [FNJJ] 657 732 + Trp CCA [ENA] ¡û
>W1710542401 FNZC01000082 Gammaproteobacteria Pseudomonas oleovorans [FNZC] 158 233 + Trp CCA [ENA] ¡û
>W1710559373 FOMO01000017 Gammaproteobacteria Pseudomonas straminea [FOMO] 178 253 + Trp CCA [ENA] ¡û
>W1710572350 FOWP01000023 Gammaproteobacteria Pseudomonas composti [FOWP] 147 222 + Trp CCA [ENA] ¡û
>W1710572778 FOWX01000052 Gammaproteobacteria Pseudomonas borbori [FOWX] 15624 15549 - Trp CCA [ENA] ¡û
>W1710573363 FOXK01000021 Gammaproteobacteria Pseudomonas toyotomiensis [FOXK] 15659 15584 - Trp CCA [ENA] ¡û
>W1710580247 FPJD01000015 Gammaproteobacteria Pseudomonas sp. NFACC19-2 [FPJD] 15400 15325 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK