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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.455813 (227 seq.)
>W1711013926
LQTW01000095
Gammaproteobacteria
Escherichia coli [LQTW]
1143
1068
-
Thr
TGT
[ENA]
¡û
>W1711158884
LVQD01000060
Gammaproteobacteria
Escherichia coli [LVQD]
6441
6366
-
Thr
TGT
[ENA]
¡û
>W1711739292
MUBR01000021
Gammaproteobacteria
Escherichia coli [MUBR]
78492
78567
+
Thr
TGT
[ENA]
¡û
>W1711744150
MUFZ01000122
Gammaproteobacteria
Escherichia coli [MUFZ]
210485
210410
-
Thr
TGT
[ENA]
¡û
>W1711928264
NAEW01000032
Gammaproteobacteria
Citrobacter braakii [NAEW]
4345
4270
-
Thr
TGT
[ENA]
¡û
>W1711971347
NDBB01000003
Gammaproteobacteria
Escherichia coli [NDBB]
7181
7106
-
Thr
TGT
[ENA]
¡û
>W1712073874
NGSL01000002
Gammaproteobacteria
Escherichia coli [NGSL]
1609270
1609345
+
Thr
TGT
[ENA]
¡û
>W131079018
ANXB01000011
Gammaproteobacteria
Escherichia coli KTE203 [ANXB]
667227
667302
+
Thr
TGT
[ENA]
¡û
>W131090990
AOGM01000030
Gammaproteobacteria
Escherichia coli O08 [AOGM]
113140
113215
+
Thr
TGT
[ENA]
¡û
>W131132639
APZX01000319
Gammaproteobacteria
Escherichia coli P0304799.3 [APZX]
2352
2427
+
Thr
TGT
[ENA]
¡û
>W131165541
ARBQ01000076
Gammaproteobacteria
Gallibacterium anatis DSM 16844 = F 149 [ARBQ]
9120
9195
+
Thr
TGT
[ENA]
¡û
>W131211948
ATNV01000057
Gammaproteobacteria
Escherichia coli MC6003 [ATNV]
960
885
-
Thr
TGT
[ENA]
¡û
>W131212326
ATOB01000044
Gammaproteobacteria
Escherichia coli AB42602061-isolate1 [ATOB]
958
883
-
Thr
TGT
[ENA]
¡û
>W131212412
ATOC01000154
Gammaproteobacteria
Escherichia coli AB42554418-isolate1 [ATOC]
960
885
-
Thr
TGT
[ENA]
¡û
>W131212473
ATOD01000157
Gammaproteobacteria
Escherichia coli AB42410445-isolate1 [ATOD]
979
904
-
Thr
TGT
[ENA]
¡û
>WENV180124092
OASX01001889
[OASX] human gut metagenome; faeces
4436
4361
-
Thr
TGT
[ENA]
¢þ
>WENV180129672
OATE01000021
[OATE] human gut metagenome; faeces
25575
25500
-
Thr
TGT
[ENA]
¢þ
>WENV180130071
OATF01000003
[OATF] human gut metagenome; faeces
103531
103456
-
Thr
TGT
[ENA]
¢þ
>WENV180163545
OAVI01000007
[OAVI] human gut metagenome; faeces
3589
3514
-
Thr
TGT
[ENA]
¢þ
>WENV180237385
OBCY01000882
[OBCY] human gut metagenome; human gut
2945
3020
+
Thr
TGT
[ENA]
¢þ
>WENV180417048
OBVH01000572
[OBVH] human gut metagenome; faeces
3043
3118
+
Thr
TGT
[ENA]
¢þ
>WENV180598151
OCPM01000021
[OCPM] human gut metagenome; faeces
21991
21916
-
Thr
TGT
[ENA]
¢þ
>W141105714
AVOX01000021
Gammaproteobacteria
Gallibacterium anatis 12656/12 [AVOX]
11947
12022
+
Thr
TGT
[ENA]
¡û
>W141118628
AVWD01000027
Gammaproteobacteria
Escherichia coli HVH 115 (4-4465997) [AVWD]
151493
151568
+
Thr
TGT
[ENA]
¡û
>W141118709
AVWE01000024
Gammaproteobacteria
Escherichia coli HVH 115 (4-4465989) [AVWE]
152756
152831
+
Thr
TGT
[ENA]
¡û
>W141129417
AWBN01000011
Gammaproteobacteria
Escherichia coli UMEA 3150-1 [AWBN]
106752
106827
+
Thr
TGT
[ENA]
¡û
>W141130962
AWCH01000018
Gammaproteobacteria
Escherichia coli UMEA 3200-1 [AWCH]
32561
32636
+
Thr
TGT
[ENA]
¡û
>W141185635
AYJY01000001
Gammaproteobacteria
Escherichia coli FAH2 [AYJY]
311716
311791
+
Thr
TGT
[ENA]
¡û
>W141185723
AYJZ01000002
Gammaproteobacteria
Escherichia coli FAH1 [AYJZ]
5766
5691
-
Thr
TGT
[ENA]
¡û
>W141185822
AYKA01000011
Gammaproteobacteria
Escherichia coli FAP1 [AYKA]
6345
6270
-
Thr
TGT
[ENA]
¡û
>W141185900
AYKB01000010
Gammaproteobacteria
Escherichia coli FAP2 [AYKB]
6352
6277
-
Thr
TGT
[ENA]
¡û
>WENV181936960
OGYV01008506
[OGYV] human gut metagenome; faeces
2886
2961
+
Thr
TGT
[ENA]
¢þ
>W141206351
AZLZ01001747
Gammaproteobacteria
Escherichia coli DORA_A_5_14_21 [AZLZ]
104
29
-
Thr
TGT
[ENA]
¡û
>WENV182426098
OIHN01007521
[OIHN] human gut metagenome; human gut
368
443
+
Thr
TGT
[ENA]
¢þ
>WENV182488365
OIRZ01005930
[OIRZ] human gut metagenome; human gut
1095
1170
+
Thr
TGT
[ENA]
¢þ
>WENV182505800
OIUY01006551
[OIUY] human gut metagenome; human gut
1085
1160
+
Thr
TGT
[ENA]
¢þ
>WENV182611325
OJJX01000012
[OJJX] metagenome; faeces
310824
310899
+
Thr
TGT
[ENA]
¢þ
>WENV182821105
OKAS01000482
[OKAS] human gut metagenome; human gut
2355
2430
+
Thr
TGT
[ENA]
¢þ
>WENV183063014
OLIF01000415
[OLIF] metagenome; faeces
3766
3841
+
Thr
TGT
[ENA]
¢þ
>WENV183090315
OLJY01000043
[OLJY] human gut metagenome; human gut
51107
51182
+
Thr
TGT
[ENA]
¢þ
>WENV183166470
OLOY01000055
[OLOY] human gut metagenome; faeces
102064
102139
+
Thr
TGT
[ENA]
¢þ
>WENV183412823
OMAM01019642
[OMAM] human gut metagenome; feces
741
816
+
Thr
TGT
[ENA]
¢þ
>WENV183707309
PDWI01007805
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
12132
12207
+
Thr
TGT
[ENA]
¢þ
>WENV183785894
PPYF01298498
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1050
975
-
Thr
TGT
[ENA]
¢þ
>W141400599
JDRV01000195
Gammaproteobacteria
Escherichia coli MS499 [JDRV]
1142
1067
-
Thr
TGT
[ENA]
¡û
>W141463470
JFJL01000020
Gammaproteobacteria
Escherichia coli [JFJL]
282789
282864
+
Thr
TGT
[ENA]
¡û
>W141463561
JFJM01000018
Gammaproteobacteria
Escherichia coli [JFJM]
282771
282846
+
Thr
TGT
[ENA]
¡û
>C181099006
CP024282
Gammaproteobacteria
Escherichia albertii 2014C-4356 [CP024282]
3291083
3291158
+
Thr
TGT
-
¡û
>C181139330
CP026755
Gammaproteobacteria
Escherichia coli AR_0077 [CP026755]
1293763
1293838
+
Thr
TGT
-
¡û
>C181145791
CP027126
Gammaproteobacteria
Escherichia coli AR_0374 [CP027126]
780311
780236
-
Thr
TGT
-
¡û
>C181174472
CP029111
Gammaproteobacteria
Escherichia coli AR436 [CP029111]
777410
777335
-
Thr
TGT
-
¡û
>C181192777
CP030781
Gammaproteobacteria
Escherichia albertii 07-3866 [CP030781]
2026744
2026669
-
Thr
TGT
-
¡û
>C181195627
CP031105
Gammaproteobacteria
Escherichia coli AMSCJX02 [CP031105]
4505235
4505310
+
Thr
TGT
-
¡û
>C191120590
CP034162
Gammaproteobacteria
Escherichia albertii 06-3542 [CP034162]
630198
630273
+
Thr
TGT
-
¡û
>C191120761
CP034166
Gammaproteobacteria
Escherichia albertii 2014C-4015 [CP034166]
703179
703104
-
Thr
TGT
-
¡û
>W141717076
JMVT01000002
Gammaproteobacteria
Escherichia coli UCI 57 [JMVT]
728638
728713
+
Thr
TGT
[ENA]
¡û
>W141717157
JMVU01000004
Gammaproteobacteria
Escherichia coli UCI 58 [JMVU]
642054
642129
+
Thr
TGT
[ENA]
¡û
>W141739809
JNOG01000005
Gammaproteobacteria
Escherichia coli [JNOG]
1621
1546
-
Thr
TGT
[ENA]
¡û
>W1910038450
BEGZ01000005
Gammaproteobacteria
Escherichia albertii Hiroshima3582 [BEGZ]
1690
1615
-
Thr
TGT
[ENA]
¡û
>W1910073738
BFIV01000135
Gammaproteobacteria
Escherichia coli ECSC056 [BFIV]
2578
2503
-
Thr
TGT
[ENA]
¡û
>W1910073773
BFIW01000011
Gammaproteobacteria
Escherichia coli ECSC057 [BFIW]
4476
4401
-
Thr
TGT
[ENA]
¡û
>W1910085324
BFOW01000023
Gammaproteobacteria
Escherichia coli JML082 [BFOW]
403803
403878
+
Thr
TGT
[ENA]
¡û
>W1910088236
BFQK01000035
Gammaproteobacteria
Escherichia coli JML128 [BFQK]
2200
2125
-
Thr
TGT
[ENA]
¡û
>W1910088585
BFQP01000023
Gammaproteobacteria
Escherichia coli JML134 [BFQP]
124
199
+
Thr
TGT
[ENA]
¡û
>W1910091843
BFSK01000004
Gammaproteobacteria
Escherichia coli JML191 [BFSK]
119784
119709
-
Thr
TGT
[ENA]
¡û
>W1910092342
BFSR01000004
Gammaproteobacteria
Escherichia coli JML200 [BFSR]
139181
139256
+
Thr
TGT
[ENA]
¡û
>W1910175862
BJCT01000059
Gammaproteobacteria
Escherichia albertii ZAH-1-3 [BJCT]
4629
4704
+
Thr
TGT
[ENA]
¡û
>W1910176006
BJCV01000106
Gammaproteobacteria
Escherichia albertii ZAI-52-1 [BJCV]
1965
1890
-
Thr
TGT
[ENA]
¡û
>W1910176091
BJCW01000051
Gammaproteobacteria
Escherichia albertii U350-1 [BJCW]
1827
1752
-
Thr
TGT
[ENA]
¡û
>W1910176175
BJCX01000118
Gammaproteobacteria
Escherichia albertii AZK-6-2 [BJCX]
1965
1890
-
Thr
TGT
[ENA]
¡û
>W1910176626
BJDD01000057
Gammaproteobacteria
Escherichia albertii Mkr3965 [BJDD]
4629
4704
+
Thr
TGT
[ENA]
¡û
>W1910176707
BJDE01000028
Gammaproteobacteria
Escherichia albertii Esc18014 [BJDE]
1965
1890
-
Thr
TGT
[ENA]
¡û
>W1910542845
FZJP01000006
Gammaproteobacteria
Escherichia coli [FZJP]
151498
151573
+
Thr
TGT
[ENA]
¡û
>W1910592038
JZOO01000034
Gammaproteobacteria
Escherichia coli HT2012069 [JZOO]
195069
195144
+
Thr
TGT
[ENA]
¡û
>W1910593586
JZPK01000140
Gammaproteobacteria
Escherichia coli HT2012178 [JZPK]
8835
8910
+
Thr
TGT
[ENA]
¡û
>W1910594845
JZQF01000117
Gammaproteobacteria
Escherichia coli HT2012135 [JZQF]
4173
4248
+
Thr
TGT
[ENA]
¡û
>W1910595239
JZQM01000044
Gammaproteobacteria
Escherichia coli HT2012121 [JZQM]
49067
49142
+
Thr
TGT
[ENA]
¡û
>W1910604175
LEOC01000010
Gammaproteobacteria
Escherichia coli 151-1941 [LEOC]
444874
444949
+
Thr
TGT
[ENA]
¡û
>W1910805526
MTWV01000032
Gammaproteobacteria
Escherichia coli M5.A.24.P-A [MTWV]
74728
74653
-
Thr
TGT
[ENA]
¡û
>W1910807825
MTXZ01000077
Gammaproteobacteria
Escherichia coli HvH-Ec82 [MTXZ]
26975
26900
-
Thr
TGT
[ENA]
¡û
>W1910847537
NBDN01000063
Gammaproteobacteria
Escherichia coli Spr2013_WWKa_OUT_56 [NBDN]
145858
145933
+
Thr
TGT
[ENA]
¡û
>W1910853387
NBJU01000088
Gammaproteobacteria
Escherichia coli Spr2013_WWKa_NEU_15 [NBJU]
1552
1477
-
Thr
TGT
[ENA]
¡û
>W1910880670
NEEG01000002
Gammaproteobacteria
Enterobacter bugandensis ECC2572 [NEEG]
1584037
1583962
-
Thr
TGT
[ENA]
¡û
>W1910915277
NHYQ01000007
Gammaproteobacteria
Escherichia coli 1610270009 [NHYQ]
12173
12248
+
Thr
TGT
[ENA]
¡û
>W1910915473
NHYT01000001
Gammaproteobacteria
Escherichia coli 1605230022 [NHYT]
3490807
3490732
-
Thr
TGT
[ENA]
¡û
>W1910950771
NJML01000001
Gammaproteobacteria
Escherichia coli MOD1-EC310 [NJML]
304147
304222
+
Thr
TGT
[ENA]
¡û
>W1910991453
NKUS01000007
Gammaproteobacteria
Escherichia coli MOD1-EC5927 [NKUS]
194641
194716
+
Thr
TGT
[ENA]
¡û
>W1910992275
NKVC01000059
Gammaproteobacteria
Escherichia coli MOD1-EC5913 [NKVC]
12004
11929
-
Thr
TGT
[ENA]
¡û
>W1911003477
NLFL01000010
Gammaproteobacteria
Gallibacterium anatis SV200 [NLFL]
12208
12283
+
Thr
TGT
[ENA]
¡û
>W1911003551
NLFM01000011
Gammaproteobacteria
Gallibacterium anatis 2PKA3 [NLFM]
68992
68917
-
Thr
TGT
[ENA]
¡û
>W1911005772
NLGR01000195
Gammaproteobacteria
Escherichia coli MOD1-EC5723 [NLGR]
393
468
+
Thr
TGT
[ENA]
¡û
>W1911014121
NLKT01000043
Gammaproteobacteria
Escherichia coli MOD1-EC5580 [NLKT]
26963
27038
+
Thr
TGT
[ENA]
¡û
>W1911017831
NLMT01000151
Gammaproteobacteria
Escherichia coli MOD1-EC5524 [NLMT]
2552
2627
+
Thr
TGT
[ENA]
¡û
>W1911018524
NLNF01000001
Gammaproteobacteria
Escherichia coli MOD1-EC5511 [NLNF]
306612
306687
+
Thr
TGT
[ENA]
¡û
>W1911019417
NLNT01000093
Gammaproteobacteria
Escherichia coli MOD1-EC5497 [NLNT]
1702
1627
-
Thr
TGT
[ENA]
¡û
>W1911019419
NLNT01000105
Gammaproteobacteria
Escherichia coli MOD1-EC5497 [NLNT]
1090
1015
-
Thr
TGT
[ENA]
¡û
>W1911021310
NLOY01000007
Gammaproteobacteria
Escherichia coli MOD1-EC5461 [NLOY]
212815
212890
+
Thr
TGT
[ENA]
¡û
>W1911029478
NLTU01000075
Gammaproteobacteria
Escherichia coli MOD1-EC5056 [NLTU]
6423
6348
-
Thr
TGT
[ENA]
¡û
>W1911029558
NLTV01000077
Gammaproteobacteria
Escherichia coli MOD1-EC5055 [NLTV]
5398
5323
-
Thr
TGT
[ENA]
¡û
>W1911029640
NLTW01000085
Gammaproteobacteria
Escherichia coli MOD1-EC5054 [NLTW]
1106
1031
-
Thr
TGT
[ENA]
¡û
>W1911031347
NLUU01000038
Gammaproteobacteria
Escherichia coli MOD1-EC5004 [NLUU]
8533
8608
+
Thr
TGT
[ENA]
¡û
>W1911031667
NLUY01000127
Gammaproteobacteria
Escherichia coli MOD1-EC6556 [NLUY]
5353
5428
+
Thr
TGT
[ENA]
¡û
>W1911033530
NLVZ01000008
Gammaproteobacteria
Escherichia coli MOD1-EC6516 [NLVZ]
156404
156479
+
Thr
TGT
[ENA]
¡û
>W1911036338
NLXJ01000003
Gammaproteobacteria
Escherichia coli MOD1-EC6446 [NLXJ]
207392
207467
+
Thr
TGT
[ENA]
¡û
>W1911037188
NLXT01000018
Gammaproteobacteria
Escherichia coli MOD1-EC6429 [NLXT]
31933
32008
+
Thr
TGT
[ENA]
¡û
>W1911039429
NLYW01000098
Gammaproteobacteria
Escherichia coli MOD1-EC6374 [NLYW]
2480
2555
+
Thr
TGT
[ENA]
¡û
>W1911041287
NLZX01000031
Gammaproteobacteria
Escherichia coli MOD1-EC6316 [NLZX]
2040
2115
+
Thr
TGT
[ENA]
¡û
>W1911045112
NMBT01000052
Gammaproteobacteria
Escherichia coli MOD1-EC6156 [NMBT]
22634
22709
+
Thr
TGT
[ENA]
¡û
>W1911045187
NMBU01000079
Gammaproteobacteria
Escherichia coli MOD1-EC6155 [NMBU]
141
216
+
Thr
TGT
[ENA]
¡û
>W1911047601
NMDE01000002
Gammaproteobacteria
Escherichia coli MOD1-EC6088 [NMDE]
5181
5106
-
Thr
TGT
[ENA]
¡û
>W1911048169
NMDM01000009
Gammaproteobacteria
Escherichia coli MOD1-EC6069 [NMDM]
154494
154569
+
Thr
TGT
[ENA]
¡û
>W1911053398
NMGG01000073
Gammaproteobacteria
Escherichia coli MOD1-EC5976 [NMGG]
7325
7400
+
Thr
TGT
[ENA]
¡û
>W1911053400
NMGG01000080
Gammaproteobacteria
Escherichia coli MOD1-EC5976 [NMGG]
77
2
-
Thr
TGT
[ENA]
¡û
>W1911057918
NMIQ01000016
Gammaproteobacteria
Escherichia coli MOD1-EC6358 [NMIQ]
98224
98299
+
Thr
TGT
[ENA]
¡û
>W1911057972
NMIR01000003
Gammaproteobacteria
Escherichia coli MOD1-EC6357 [NMIR]
30510
30435
-
Thr
TGT
[ENA]
¡û
>W1911058479
NMIY01000007
Gammaproteobacteria
Escherichia coli MOD1-EC6348 [NMIY]
11978
11903
-
Thr
TGT
[ENA]
¡û
>W1911058666
NMJA01000090
Gammaproteobacteria
Escherichia coli MOD1-EC6343 [NMJA]
12099
12024
-
Thr
TGT
[ENA]
¡û
>W1911059076
NMJG01000029
Gammaproteobacteria
Escherichia coli MOD1-EC6323 [NMJG]
47166
47091
-
Thr
TGT
[ENA]
¡û
>W1911059090
NMJH01000001
Gammaproteobacteria
Escherichia coli MOD1-EC6322 [NMJH]
194870
194945
+
Thr
TGT
[ENA]
¡û
>W1911062950
NMLE01000001
Gammaproteobacteria
Escherichia coli MOD1-EC6730 [NMLE]
88665
88590
-
Thr
TGT
[ENA]
¡û
>W1911063604
NMLM01000004
Gammaproteobacteria
Escherichia coli MOD1-EC6714 [NMLM]
193918
193993
+
Thr
TGT
[ENA]
¡û
>W1911064807
NMMA01000061
Gammaproteobacteria
Escherichia coli MOD1-EC6596 [NMMA]
9474
9399
-
Thr
TGT
[ENA]
¡û
>W1911064890
NMMB01000071
Gammaproteobacteria
Escherichia coli MOD1-EC6594 [NMMB]
6235
6310
+
Thr
TGT
[ENA]
¡û
>W1911066488
NMMW01000172
Gammaproteobacteria
Escherichia coli MOD1-EC6557 [NMMW]
167
242
+
Thr
TGT
[ENA]
¡û
>W1911066655
NMMY01000039
Gammaproteobacteria
Escherichia coli MOD1-EC7013 [NMMY]
18081
18156
+
Thr
TGT
[ENA]
¡û
>W1911085773
NNSX01000012
Gammaproteobacteria
Escherichia coli MOD1-EC6681 [NNSX]
154177
154252
+
Thr
TGT
[ENA]
¡û
>W1911085777
NNSX01000015
Gammaproteobacteria
Escherichia coli MOD1-EC6681 [NNSX]
104632
104707
+
Thr
TGT
[ENA]
¡û
>W1911100186
NOAN01000009
Gammaproteobacteria
Escherichia coli MOD1-EC5858 [NOAN]
1048
973
-
Thr
TGT
[ENA]
¡û
>W1911100269
NOAO01000008
Gammaproteobacteria
Escherichia coli MOD1-EC5857 [NOAO]
1048
973
-
Thr
TGT
[ENA]
¡û
>W1911100560
NOAS01000008
Gammaproteobacteria
Escherichia coli MOD1-EC5853 [NOAS]
196128
196203
+
Thr
TGT
[ENA]
¡û
>W1911103706
NOCK01000001
Gammaproteobacteria
Escherichia coli MOD1-EC5798 [NOCK]
303074
303149
+
Thr
TGT
[ENA]
¡û
>W1911112703
NOHJ01000012
Gammaproteobacteria
Escherichia coli MOD1-EC5072 [NOHJ]
154620
154695
+
Thr
TGT
[ENA]
¡û
>W1911121526
NONB01000014
Gammaproteobacteria
Escherichia coli MOD1-EC6972 [NONB]
143748
143823
+
Thr
TGT
[ENA]
¡û
>W1911132597
NOSY01000021
Gammaproteobacteria
Escherichia coli MOD1-EC6749 [NOSY]
65131
65206
+
Thr
TGT
[ENA]
¡û
>W1911133343
NOTJ01000002
Gammaproteobacteria
Escherichia coli MOD1-EC6738 [NOTJ]
159524
159599
+
Thr
TGT
[ENA]
¡û
>W1911133853
NOTQ01000004
Gammaproteobacteria
Escherichia coli MOD1-EC6713 [NOTQ]
214232
214307
+
Thr
TGT
[ENA]
¡û
>W1911233817
NSAC01000085
Gammaproteobacteria
Escherichia coli A213 [NSAC]
3312
3237
-
Thr
TGT
[ENA]
¡û
>W1911289054
NTOU01000008
Gammaproteobacteria
Escherichia coli MOD1-EC6188 [NTOU]
155240
155315
+
Thr
TGT
[ENA]
¡û
>W1911290117
NTPI01000059
Gammaproteobacteria
Escherichia coli MOD1-EC5901 [NTPI]
12004
11929
-
Thr
TGT
[ENA]
¡û
>W1911613130
POAS01000001
Gammaproteobacteria
Escherichia coli 320430 [POAS]
233074
232999
-
Thr
TGT
[ENA]
¡û
>W1911613271
POAU01000009
Gammaproteobacteria
Escherichia coli 100640 [POAU]
150608
150683
+
Thr
TGT
[ENA]
¡û
>W1911623119
PQTE01000011
Gammaproteobacteria
Escherichia coli 286A [PQTE]
25351
25276
-
Thr
TGT
[ENA]
¡û
>W1810013316
BGLN01000111
Gammaproteobacteria
Escherichia coli TUM15926 [BGLN]
1347
1272
-
Thr
TGT
[ENA]
¡û
>W1810013324
BGLN01000132
Gammaproteobacteria
Escherichia coli TUM15926 [BGLN]
801
728
-
Thr
TGT
[ENA]
¡û
>W1810021767
BGRV01000003
Gammaproteobacteria
Escherichia coli TUM18586 [BGRV]
152356
152431
+
Thr
TGT
[ENA]
¡û
>W1810096144
PGJQ01000171
Gammaproteobacteria
Escherichia coli ECRLC09 [PGJQ]
3327
3402
+
Thr
TGT
[ENA]
¡û
>W1810164060
PJGM01000004
Gammaproteobacteria
Escherichia coli LN38 [PJGM]
185053
185128
+
Thr
TGT
[ENA]
¡û
>W1810166620
PJHX01000002
Gammaproteobacteria
Escherichia coli GS11 [PJHX]
192915
192990
+
Thr
TGT
[ENA]
¡û
>W1810307992
PTSC01000079
Gammaproteobacteria
Escherichia sp. MOD1-EC6158 [PTSC]
1861
1786
-
Thr
TGT
[ENA]
¡û
>W1810308928
PTSP01000084
Gammaproteobacteria
Escherichia sp. MOD1-EC6096 [PTSP]
187
112
-
Thr
TGT
[ENA]
¡û
>W1810308962
PTSQ01000005
Gammaproteobacteria
Escherichia albertii MOD1-EC5952 [PTSQ]
267129
267204
+
Thr
TGT
[ENA]
¡û
>W1810332370
PUQJ01000001
Gammaproteobacteria
Escherichia coli GER_MD67_1606_Eco_100 [PUQJ]
378526
378601
+
Thr
TGT
[ENA]
¡û
>W1810334100
PURH01000062
Gammaproteobacteria
Escherichia coli GER_MD01_1603_Eco_066 [PURH]
9077
9002
-
Thr
TGT
[ENA]
¡û
>W1810471624
QAGD01000037
Gammaproteobacteria
Escherichia coli KG-17 [QAGD]
487842
487917
+
Thr
TGT
[ENA]
¡û
>W1810727854
QOEO01000074
Gammaproteobacteria
Escherichia coli AVC249 [QOEO]
20895
20820
-
Thr
TGT
[ENA]
¡û
>W1810736266
QOLJ01000013
Gammaproteobacteria
Escherichia coli SC401 [QOLJ]
123562
123637
+
Thr
TGT
[ENA]
¡û
>W1810737696
QOMC01000035
Gammaproteobacteria
Escherichia coli SC382 [QOMC]
77
2
-
Thr
TGT
[ENA]
¡û
>W1810742056
QOOH01000016
Gammaproteobacteria
Escherichia coli SC320 [QOOH]
73962
73887
-
Thr
TGT
[ENA]
¡û
>W1810742251
QOOJ01000087
Gammaproteobacteria
Escherichia coli SC318 [QOOJ]
152222
152297
+
Thr
TGT
[ENA]
¡û
>W10117272
ADTM01000395
Gammaproteobacteria
Escherichia coli MS 182-1 [ADTM]
14706
14781
+
Thr
TGT
[ENA]
¡û
>C11109515
CP002667
Gammaproteobacteria
Gallibacterium anatis UMN179 [CP002667]
1428334
1428409
+
Thr
TGT
[Ensembl]
¡û
>W1510721017
CXWT01000049
Gammaproteobacteria
Escherichia coli [CXWT]
15885
15960
+
Thr
TGT
[ENA]
¡û
>W1511301085
JPHN01000100
Gammaproteobacteria
Gallibacterium anatis DSM 16844 = F 149 F149 [JPHN]
477
402
-
Thr
TGT
[ENA]
¡û
>W1511301113
JPHO01000021
Gammaproteobacteria
Gallibacterium anatis 10672-6 [JPHO]
133810
133885
+
Thr
TGT
[ENA]
¡û
>W1511303489
JPJL01000038
Gammaproteobacteria
Gallibacterium anatis 7990 [JPJL]
677
602
-
Thr
TGT
[ENA]
¡û
>W1511303545
JPJM01000053
Gammaproteobacteria
Gallibacterium anatis str. Avicor [JPJM]
4886
4961
+
Thr
TGT
[ENA]
¡û
>W1511303587
JPJN01000046
Gammaproteobacteria
Gallibacterium anatis 21K2 [JPJN]
6596
6671
+
Thr
TGT
[ENA]
¡û
>W1511303637
JPJO01000065
Gammaproteobacteria
Gallibacterium anatis 23K10 [JPJO]
11942
12017
+
Thr
TGT
[ENA]
¡û
>W1511303699
JPJP01000060
Gammaproteobacteria
Gallibacterium anatis 23T10 [JPJP]
486
411
-
Thr
TGT
[ENA]
¡û
>W1511303749
JPJQ01000058
Gammaproteobacteria
Gallibacterium anatis 4895 [JPJQ]
1563
1488
-
Thr
TGT
[ENA]
¡û
>W1511314285
JPTU01000071
Gammaproteobacteria
Gallibacterium anatis 10672/9 [JPTU]
11947
12022
+
Thr
TGT
[ENA]
¡û
>W1511318009
JPXO01000086
Gammaproteobacteria
Gallibacterium anatis 21T2 [JPXO]
10627
10702
+
Thr
TGT
[ENA]
¡û
>W1511318054
JPXP01000058
Gammaproteobacteria
Gallibacterium anatis 36961/Sv7 [JPXP]
585
510
-
Thr
TGT
[ENA]
¡û
>W1511318072
JPXQ01000007
Gammaproteobacteria
Gallibacterium anatis IPDH697-78 [JPXQ]
827
752
-
Thr
TGT
[ENA]
¡û
>W1511318158
JPXR01000070
Gammaproteobacteria
Gallibacterium anatis Gerl.3348/80 [JPXR]
9108
9183
+
Thr
TGT
[ENA]
¡û
>W1511318192
JPXS01000035
Gammaproteobacteria
Gallibacterium anatis 20558/3kl. [JPXS]
77929
78004
+
Thr
TGT
[ENA]
¡û
>W1511318252
JPXT01000040
Gammaproteobacteria
Gallibacterium anatis CCM5995 [JPXT]
8776
8851
+
Thr
TGT
[ENA]
¡û
>W1511318290
JPXU01000040
Gammaproteobacteria
Gallibacterium anatis Gerl.4224/88 [JPXU]
485
410
-
Thr
TGT
[ENA]
¡û
>W1511318354
JPXV01000067
Gammaproteobacteria
Gallibacterium anatis F0003406 [JPXV]
4834
4909
+
Thr
TGT
[ENA]
¡û
>W1511318376
JPXW01000013
Gammaproteobacteria
Gallibacterium anatis 1797 [JPXW]
1117
1042
-
Thr
TGT
[ENA]
¡û
>W1511318462
JPXX01000047
Gammaproteobacteria
Gallibacterium genomosp. 1 1 CCM5974 [JPXX]
8561
8636
+
Thr
TGT
[ENA]
¡û
>W1511318488
JPXY01000026
Gammaproteobacteria
Gallibacterium genomosp. 2 2 CCM5976 [JPXY]
1374
1299
-
Thr
TGT
[ENA]
¡û
>W1511370067
JSIA01000544
Gammaproteobacteria
Escherichia coli upec-34 [JSIA]
1163
1088
-
Thr
TGT
[ENA]
¡û
>W1511376633
JSNZ01000078
Gammaproteobacteria
Escherichia coli upec-126 [JSNZ]
153039
153114
+
Thr
TGT
[ENA]
¡û
>W1511377713
JSOV01000049
Gammaproteobacteria
Escherichia coli upec-105 [JSOV]
2031
1956
-
Thr
TGT
[ENA]
¡û
>W11122261
ADTM01000395
Gammaproteobacteria
Escherichia coli MS 182-1 [ADTM]
14706
14781
+
Thr
TGT
[ENA]
¡û
>W1511426911
JUCF01000127
Gammaproteobacteria
Escherichia coli CVM N36834PS [JUCF]
3095
3170
+
Thr
TGT
[ENA]
¡û
>W1511532955
JYMM01000043
Gammaproteobacteria
Enterobacter asburiae MNCRE20 [JYMM]
15017
15092
+
Thr
TGT
[ENA]
¡û
>C161021620
CP009578
Gammaproteobacteria
Escherichia coli FAP1 [CP009578]
1948949
1949024
+
Thr
TGT
[Ensembl]
¡û
>W121004237
AFQH01000032
Gammaproteobacteria
Escherichia coli H494 [AFQH]
11877
11802
-
Thr
TGT
[ENA]
¡û
>W1610054846
BBVE01000009
Gammaproteobacteria
Escherichia albertii [BBVE]
1890
1815
-
Thr
TGT
[ENA]
¡û
>W1610055124
BBVI01000034
Gammaproteobacteria
Escherichia albertii [BBVI]
1728
1653
-
Thr
TGT
[ENA]
¡û
>W1610055180
BBVJ01000075
Gammaproteobacteria
Escherichia albertii [BBVJ]
3526
3601
+
Thr
TGT
[ENA]
¡û
>W1610055378
BBVN01000010
Gammaproteobacteria
Escherichia albertii [BBVN]
176262
176337
+
Thr
TGT
[ENA]
¡û
>W1610055535
BBVP01000042
Gammaproteobacteria
Escherichia albertii [BBVP]
1733
1658
-
Thr
TGT
[ENA]
¡û
>W1610055729
BBVS01000054
Gammaproteobacteria
Escherichia albertii [BBVS]
1662
1587
-
Thr
TGT
[ENA]
¡û
>W1610055790
BBVT01000057
Gammaproteobacteria
Escherichia albertii [BBVT]
2183
2108
-
Thr
TGT
[ENA]
¡û
>W1610056174
BBWA01000002
Gammaproteobacteria
Escherichia albertii [BBWA]
570281
570356
+
Thr
TGT
[ENA]
¡û
>W1610545031
JTJL01000037
Gammaproteobacteria
Gallibacterium salpingitidis [JTJL]
39235
39310
+
Thr
TGT
[ENA]
¡û
>W1610545076
JTJM01000017
Gammaproteobacteria
Gallibacterium genomosp. 3 [JTJM]
492
417
-
Thr
TGT
[ENA]
¡û
>W1610545126
JTJN01000026
Gammaproteobacteria
Gallibacterium anatis [JTJN]
1576
1501
-
Thr
TGT
[ENA]
¡û
>W1610545164
JTJO01000010
Gammaproteobacteria
Gallibacterium anatis [JTJO]
9052
9127
+
Thr
TGT
[ENA]
¡û
>W1610545253
JTJP01000064
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJP]
483
408
-
Thr
TGT
[ENA]
¡û
>W1610545264
JTJQ01000003
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
16324
16399
+
Thr
TGT
[ENA]
¡û
>W1610545327
JTJR01000021
Gammaproteobacteria
Gallibacterium genomosp. 3 [JTJR]
496
421
-
Thr
TGT
[ENA]
¡û
>W1610545445
JTJT01000089
Gammaproteobacteria
Gallibacterium salpingitidis [JTJT]
8511
8586
+
Thr
TGT
[ENA]
¡û
>W1610545474
JTJU01000035
Gammaproteobacteria
Gallibacterium salpingitidis [JTJU]
793
718
-
Thr
TGT
[ENA]
¡û
>W1610862402
LQTW01000095
Gammaproteobacteria
Escherichia coli [LQTW]
1143
1068
-
Thr
TGT
[ENA]
¡û
>W1610969424
LVQD01000060
Gammaproteobacteria
Escherichia coli [LVQD]
6441
6366
-
Thr
TGT
[ENA]
¡û
>W1710002779
ADJZ01000018
Gammaproteobacteria
Escherichia coli H420 [ADJZ]
704503
704578
+
Thr
TGT
[ENA]
¡û
>W1710051545
BBVE01000009
Gammaproteobacteria
Escherichia albertii [BBVE]
1890
1815
-
Thr
TGT
[ENA]
¡û
>W1710051823
BBVI01000034
Gammaproteobacteria
Escherichia albertii [BBVI]
1728
1653
-
Thr
TGT
[ENA]
¡û
>W1710051879
BBVJ01000075
Gammaproteobacteria
Escherichia albertii [BBVJ]
3526
3601
+
Thr
TGT
[ENA]
¡û
>W1710052077
BBVN01000010
Gammaproteobacteria
Escherichia albertii [BBVN]
176262
176337
+
Thr
TGT
[ENA]
¡û
>W1710052234
BBVP01000042
Gammaproteobacteria
Escherichia albertii [BBVP]
1733
1658
-
Thr
TGT
[ENA]
¡û
>W1710052428
BBVS01000054
Gammaproteobacteria
Escherichia albertii [BBVS]
1662
1587
-
Thr
TGT
[ENA]
¡û
>W1710052489
BBVT01000057
Gammaproteobacteria
Escherichia albertii [BBVT]
2183
2108
-
Thr
TGT
[ENA]
¡û
>W1710052873
BBWA01000002
Gammaproteobacteria
Escherichia albertii [BBWA]
570281
570356
+
Thr
TGT
[ENA]
¡û
>W1710648162
JTJL01000037
Gammaproteobacteria
Gallibacterium salpingitidis [JTJL]
39235
39310
+
Thr
TGT
[ENA]
¡û
>W1710648207
JTJM01000017
Gammaproteobacteria
Gallibacterium genomosp. 3 [JTJM]
492
417
-
Thr
TGT
[ENA]
¡û
>W1710648257
JTJN01000026
Gammaproteobacteria
Gallibacterium anatis [JTJN]
1576
1501
-
Thr
TGT
[ENA]
¡û
>W1710648295
JTJO01000010
Gammaproteobacteria
Gallibacterium anatis [JTJO]
9052
9127
+
Thr
TGT
[ENA]
¡û
>W1710648384
JTJP01000064
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJP]
483
408
-
Thr
TGT
[ENA]
¡û
>W1710648395
JTJQ01000003
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
16324
16399
+
Thr
TGT
[ENA]
¡û
>W1710648458
JTJR01000021
Gammaproteobacteria
Gallibacterium genomosp. 3 [JTJR]
496
421
-
Thr
TGT
[ENA]
¡û
>W1710648576
JTJT01000089
Gammaproteobacteria
Gallibacterium salpingitidis [JTJT]
8511
8586
+
Thr
TGT
[ENA]
¡û
>W1710648605
JTJU01000035
Gammaproteobacteria
Gallibacterium salpingitidis [JTJU]
793
718
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
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(Sample source for ENV)
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Start
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Representative sequence of each cluster
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