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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.457240 (106 seq.)
>W131027618
AJAM01000009
Bacillota
Enterococcus casseliflavus ATCC 49996 [AJAM]
80803
80877
+
Val
TAC
[ENA]
¡û
>W131027627
AJAM01000011
Bacillota
Enterococcus casseliflavus ATCC 49996 [AJAM]
3293
3367
+
Val
TAC
[ENA]
¡û
>W131201148
ASVX01000004
Bacillota
Enterococcus casseliflavus ATCC 49996 [ASVX]
238421
238347
-
Val
TAC
[ENA]
¡û
>W131201157
ASVX01000005
Bacillota
Enterococcus casseliflavus ATCC 49996 [ASVX]
124
198
+
Val
TAC
[ENA]
¡û
>W1711460397
MJEF01000004
Bacillota
Enterococcus casseliflavus [MJEF]
173561
173489
-
Val
TAC
[ENA]
¡û
>W1711460416
MJEF01000019
Bacillota
Enterococcus casseliflavus [MJEF]
73525
73451
-
Val
TAC
[ENA]
¡û
>W1711460450
MJEG01000003
Bacillota
Enterococcus casseliflavus [MJEG]
226348
226274
-
Val
TAC
[ENA]
¡û
>W1711460483
MJEG01000012
Bacillota
Enterococcus casseliflavus [MJEG]
148253
148181
-
Val
TAC
[ENA]
¡û
>W1711738431
MUBE01000002
Bacillota
Enterococcus casseliflavus [MUBE]
183632
183558
-
Val
TAC
[ENA]
¡û
>W1711738460
MUBE01000007
Bacillota
Enterococcus casseliflavus [MUBE]
314077
314005
-
Val
TAC
[ENA]
¡û
>W1712067606
NGLC01000001
Bacillota
Enterococcus sp. 5B3_DIV0040 [NGLC]
2586
2660
+
Val
TAC
[ENA]
¡û
>W1712067627
NGLC01000001
Bacillota
Enterococcus sp. 5B3_DIV0040 [NGLC]
778730
778802
+
Val
TAC
[ENA]
¡û
>W1712067642
NGLC01000002
Bacillota
Enterococcus sp. 5B3_DIV0040 [NGLC]
261261
261187
-
Val
TAC
[ENA]
¡û
>W1712067761
NGLF01000001
Bacillota
Enterococcus sp. 4E1_DIV0656 [NGLF]
2070432
2070504
+
Val
TAC
[ENA]
¡û
>W1712067774
NGLF01000001
Bacillota
Enterococcus sp. 4E1_DIV0656 [NGLF]
967352
967278
-
Val
TAC
[ENA]
¡û
>W1712067783
NGLF01000001
Bacillota
Enterococcus sp. 4E1_DIV0656 [NGLF]
652797
652723
-
Val
TAC
[ENA]
¡û
>W1712067886
NGLH01000001
Bacillota
Enterococcus sp. 3G6_DIV0642 [NGLH]
3474873
3474799
-
Val
TAC
[ENA]
¡û
>W1712067894
NGLH01000001
Bacillota
Enterococcus sp. 3G6_DIV0642 [NGLH]
3228440
3228366
-
Val
TAC
[ENA]
¡û
>W1712067916
NGLH01000001
Bacillota
Enterococcus sp. 3G6_DIV0642 [NGLH]
2446604
2446532
-
Val
TAC
[ENA]
¡û
>W1712067989
NGLJ01000001
Bacillota
Enterococcus sp. 3C8_DIV0646 [NGLJ]
1307104
1307030
-
Val
TAC
[ENA]
¡û
>W1712067998
NGLJ01000001
Bacillota
Enterococcus sp. 3C8_DIV0646 [NGLJ]
968727
968653
-
Val
TAC
[ENA]
¡û
>W1712068038
NGLJ01000002
Bacillota
Enterococcus sp. 3C8_DIV0646 [NGLJ]
1222297
1222225
-
Val
TAC
[ENA]
¡û
>W1712068058
NGLK01000001
Bacillota
Enterococcus sp. 3C7_DIV0644 [NGLK]
2949212
2949284
+
Val
TAC
[ENA]
¡û
>W1712068071
NGLK01000001
Bacillota
Enterococcus sp. 3C7_DIV0644 [NGLK]
1854146
1854072
-
Val
TAC
[ENA]
¡û
>W1712068079
NGLK01000001
Bacillota
Enterococcus sp. 3C7_DIV0644 [NGLK]
1582019
1581945
-
Val
TAC
[ENA]
¡û
>W1712068102
NGLL01000001
Bacillota
Enterococcus sp. 2G9_DIV0600 [NGLL]
3149
3223
+
Val
TAC
[ENA]
¡û
>W1712068138
NGLL01000001
Bacillota
Enterococcus sp. 2G9_DIV0600 [NGLL]
2384562
2384490
-
Val
TAC
[ENA]
¡û
>W1712068217
NGLN01000001
Bacillota
Enterococcus sp. 2F9_DIV0599 [NGLN]
2589869
2589941
+
Val
TAC
[ENA]
¡û
>W1712068230
NGLN01000001
Bacillota
Enterococcus sp. 2F9_DIV0599 [NGLN]
1493745
1493671
-
Val
TAC
[ENA]
¡û
>W1712068238
NGLN01000001
Bacillota
Enterococcus sp. 2F9_DIV0599 [NGLN]
1219697
1219623
-
Val
TAC
[ENA]
¡û
>W1712069275
NGMG01000001
Bacillota
Enterococcus faecium [NGMG]
336434
336506
+
Val
TAC
[ENA]
¡û
>W1712069290
NGMG01000001
Bacillota
Enterococcus faecium [NGMG]
2925275
2925201
-
Val
TAC
[ENA]
¡û
>W1712069298
NGMG01000001
Bacillota
Enterococcus faecium [NGMG]
2569732
2569658
-
Val
TAC
[ENA]
¡û
>W1712097016
NIBN01000001
Bacillota
Enterococcus sp. 6D12_DIV0197 [NIBN]
3613776
3613702
-
Val
TAC
[ENA]
¡û
>W1712097062
NIBN01000001
Bacillota
Enterococcus sp. 6D12_DIV0197 [NIBN]
2799206
2799134
-
Val
TAC
[ENA]
¡û
>W1712097075
NIBN01000001
Bacillota
Enterococcus sp. 6D12_DIV0197 [NIBN]
140631
140557
-
Val
TAC
[ENA]
¡û
>W1712097161
NIBP01000002
Bacillota
Enterococcus sp. 8E11_MSG4843 [NIBP]
5057
5131
+
Val
TAC
[ENA]
¡û
>W1712097169
NIBP01000002
Bacillota
Enterococcus sp. 8E11_MSG4843 [NIBP]
345864
345938
+
Val
TAC
[ENA]
¡û
>W131027646
AJAM01000016
Bacillota
Enterococcus casseliflavus ATCC 49996 [AJAM]
3751
3823
+
Val
TAC
[ENA]
¡û
>W131201133
ASVX01000002
Bacillota
Enterococcus casseliflavus ATCC 49996 [ASVX]
605815
605743
-
Val
TAC
[ENA]
¡û
>W131208740
ATID01000051
Bacillota
Enterococcus faecium 13.SD.W.09 [ATID]
276
348
+
Val
TAC
[ENA]
¡û
>W131209136
ATIM01000157
Bacillota
Enterococcus faecalis 06-MB-DW-09 [ATIM]
272
344
+
Val
TAC
[ENA]
¡û
>WENV180168083
OAVP01009488
[OAVP] human gut metagenome; faeces
702
628
-
Val
TAC
[ENA]
¢þ
>WENV180180458
OAWK01001878
[OAWK] human gut metagenome; faeces
1232
1306
+
Val
TAC
[ENA]
¢þ
>WENV180449221
OBXF01007613
[OBXF] human gut metagenome; faeces
596
524
-
Val
TAC
[ENA]
¢þ
>WENV180457628
OBXV01000004
[OBXV] human gut metagenome; faeces
302
374
+
Val
TAC
[ENA]
¢þ
>WENV180503813
OCAN01000068
[OCAN] human gut metagenome; faeces
384
456
+
Val
TAC
[ENA]
¢þ
>WENV180504364
OCAN01001869
[OCAN] human gut metagenome; faeces
5442
5368
-
Val
TAC
[ENA]
¢þ
>WENV182400077
OIEP01000531
[OIEP] human gut metagenome; human gut
4047
3973
-
Val
TAC
[ENA]
¢þ
>WENV182400151
OIEP01002273
[OIEP] human gut metagenome; human gut
165
237
+
Val
TAC
[ENA]
¢þ
>WENV182404402
OIEU01021457
[OIEU] human gut metagenome; human gut
187
113
-
Val
TAC
[ENA]
¢þ
>WENV182601767
OJJJ01000509
[OJJJ] metagenome; faeces
143
217
+
Val
TAC
[ENA]
¢þ
>WENV182601916
OJJJ01001559
[OJJJ] metagenome; faeces
369
441
+
Val
TAC
[ENA]
¢þ
>WENV182613488
OJKA01000741
[OJKA] metagenome; faeces
9530
9604
+
Val
TAC
[ENA]
¢þ
>WENV182949790
OKVQ01000173
[OKVQ] human gut metagenome; human gut
93
167
+
Val
TAC
[ENA]
¢þ
>WENV182949845
OKVQ01000610
[OKVQ] human gut metagenome; human gut
2711
2639
-
Val
TAC
[ENA]
¢þ
>WENV182982164
OKZA01000254
[OKZA] human gut metagenome; human gut
174
100
-
Val
TAC
[ENA]
¢þ
>W09115332
ACAH01000048
Bacillota
Enterococcus casseliflavus EC30 [ACAH]
242
314
+
Val
TAC
[ENA]
¡û
>W09115344
ACAH01000074
Bacillota
Enterococcus casseliflavus EC30 [ACAH]
16
90
+
Val
TAC
[ENA]
¡û
>W09115520
ACAL01000035
Bacillota
Enterococcus casseliflavus EC10 [ACAL]
242
314
+
Val
TAC
[ENA]
¡û
>W09115532
ACAL01000051
Bacillota
Enterococcus casseliflavus EC10 [ACAL]
597
523
-
Val
TAC
[ENA]
¡û
>W09115644
ACAO01000031
Bacillota
Enterococcus casseliflavus EC20 [ACAO]
242
314
+
Val
TAC
[ENA]
¡û
>W09115665
ACAO01000056
Bacillota
Enterococcus casseliflavus EC20 [ACAO]
16
90
+
Val
TAC
[ENA]
¡û
>C181083345
CP023515
Bacillota
Enterococcus sp. FDAARGOS_375 [CP023515]
2466624
2466696
+
Val
TAC
-
¡û
>C181083358
CP023515
Bacillota
Enterococcus sp. FDAARGOS_375 [CP023515]
1423788
1423714
-
Val
TAC
-
¡û
>C181083367
CP023515
Bacillota
Enterococcus sp. FDAARGOS_375 [CP023515]
1113968
1113894
-
Val
TAC
-
¡û
>C181114761
CP025223
Bacillota
Enterococcus sp. CR-Ec1 [CP025223]
1121888
1121960
+
Val
TAC
-
¡û
>C181114774
CP025223
Bacillota
Enterococcus sp. CR-Ec1 [CP025223]
3785961
3785887
-
Val
TAC
-
¡û
>C181114783
CP025223
Bacillota
Enterococcus sp. CR-Ec1 [CP025223]
3453693
3453619
-
Val
TAC
-
¡û
>C191094121
CP032739
Bacillota
Enterococcus casseliflavus EC-369 [CP032739]
822249
822323
+
Val
TAC
-
¡û
>C191094130
CP032739
Bacillota
Enterococcus casseliflavus EC-369 [CP032739]
1076595
1076669
+
Val
TAC
-
¡û
>C191094163
CP032739
Bacillota
Enterococcus casseliflavus EC-369 [CP032739]
1839621
1839693
+
Val
TAC
-
¡û
>W1910181715
BJMG01000029
Bacillota
Enterococcus casseliflavus NBRC 12256 [BJMG]
14096
14024
-
Val
TAC
[ENA]
¡û
>W1910181725
BJMG01000049
Bacillota
Enterococcus casseliflavus NBRC 12256 [BJMG]
16
90
+
Val
TAC
[ENA]
¡û
>W1810793562
QRJU01000012
Bacillota
Enterococcus casseliflavus AM17-31 [QRJU]
111368
111296
-
Val
TAC
[ENA]
¡û
>W1810798128
QRMZ01000009
Bacillota
Enterococcus casseliflavus AF48-16 [QRMZ]
437
509
+
Val
TAC
[ENA]
¡û
>C151006824
CP004856
Bacillota
Enterococcus casseliflavus EC20 [CP004856]
3394185
3394111
-
Val
TAC
[Ensembl]
¡û
>C151006833
CP004856
Bacillota
Enterococcus casseliflavus EC20 [CP004856]
3147575
3147501
-
Val
TAC
[Ensembl]
¡û
>C151006866
CP004856
Bacillota
Enterococcus casseliflavus EC20 [CP004856]
2402044
2401972
-
Val
TAC
[Ensembl]
¡û
>W1510079454
CDRD01001772
Bacillota
Enterococcus casseliflavus 3h10B [CDRD]
169
243
+
Val
TAC
[ENA]
¡û
>W1510079482
CDRD01002236
Bacillota
Enterococcus casseliflavus 3h10B [CDRD]
125
51
-
Val
TAC
[ENA]
¡û
>W1510079498
CDRD01002654
Bacillota
Enterococcus casseliflavus 3h10B [CDRD]
348
276
-
Val
TAC
[ENA]
¡û
>W1510079508
CDRE01000263
Bacillota
Enterococcus casseliflavus 1a6A [CDRE]
1886
1814
-
Val
TAC
[ENA]
¡û
>W1510079546
CDRE01001595
Bacillota
Enterococcus casseliflavus 1a6A [CDRE]
5421
5495
+
Val
TAC
[ENA]
¡û
>W1510079555
CDRE01001902
Bacillota
Enterococcus casseliflavus 1a6A [CDRE]
959
885
-
Val
TAC
[ENA]
¡û
>W11151175
AEWT01000030
Bacillota
Enterococcus casseliflavus ATCC 12755 [AEWT]
166600
166528
-
Val
TAC
[ENA]
¡û
>W11151188
AEWT01000055
Bacillota
Enterococcus casseliflavus ATCC 12755 [AEWT]
16
90
+
Val
TAC
[ENA]
¡û
>C161066322
CP014067
Bacillota
Enterococcus gallinarum FDAARGOS_163 [CP014067]
2147663
2147735
+
Val
TAC
[Ensembl]
¡û
>C161066337
CP014067
Bacillota
Enterococcus gallinarum FDAARGOS_163 [CP014067]
1029312
1029238
-
Val
TAC
[Ensembl]
¡û
>C161066346
CP014067
Bacillota
Enterococcus gallinarum FDAARGOS_163 [CP014067]
723010
722936
-
Val
TAC
[Ensembl]
¡û
>W121077268
AKCC01000001
Bacillota
Enterococcus casseliflavus EC20 [AKCC]
2414095
2414021
-
Val
TAC
[ENA]
¡û
>W121077277
AKCC01000001
Bacillota
Enterococcus casseliflavus EC20 [AKCC]
2167485
2167411
-
Val
TAC
[ENA]
¡û
>W121086962
AKKS01000033
Bacillota
Enterococcus sp. C1 [AKKS]
597
523
-
Val
TAC
[ENA]
¡û
>W1610066459
BCPT01000009
Bacillota
Enterococcus casseliflavus NBRC 100478 [BCPT]
145134
145062
-
Val
TAC
[ENA]
¡û
>W1610066496
BCPT01000052
Bacillota
Enterococcus casseliflavus NBRC 100478 [BCPT]
515
441
-
Val
TAC
[ENA]
¡û
>W121077310
AKCC01000001
Bacillota
Enterococcus casseliflavus EC20 [AKCC]
1421954
1421882
-
Val
TAC
[ENA]
¡û
>W121086945
AKKS01000011
Bacillota
Enterococcus sp. C1 [AKKS]
263
335
+
Val
TAC
[ENA]
¡û
>WENV085316
BABC01000359
Gut microbiome of Human (healthy human sample In-B, Infant, Male)
5061
5138
+
Val
TAC
[ENA]
>WENV085413
BABC01005691
Gut microbiome of Human (healthy human sample In-B, Infant, Male)
493
418
-
Val
TAC
[ENA]
>W1710063797
BCPT01000009
Bacillota
Enterococcus casseliflavus NBRC 100478 [BCPT]
145134
145062
-
Val
TAC
[ENA]
¡û
>W1710063834
BCPT01000052
Bacillota
Enterococcus casseliflavus NBRC 100478 [BCPT]
515
441
-
Val
TAC
[ENA]
¡û
>W1710520622
FNFS01000017
Bacillota
Enterococcus casseliflavus [FNFS]
77665
77593
-
Val
TAC
[ENA]
¡û
>W1710549439
FOEN01000001
Bacillota
Ignavigranum ruoffiae [FOEN]
457953
457878
-
Val
TAC
[ENA]
¡û
>W1710559387
FOMP01000002
Bacillota
Enterococcus casseliflavus [FOMP]
528283
528211
-
Val
TAC
[ENA]
¡û
>W1710559401
FOMP01000006
Bacillota
Enterococcus casseliflavus [FOMP]
256065
255991
-
Val
TAC
[ENA]
¡û
>W1710659071
JXKD01000006
Bacillota
Enterococcus aquimarinus [JXKD]
145284
145208
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK