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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.457524 (227 seq.)
>W1710909062
LNQD01000052
Bacillota
Lacticaseibacillus paracasei casei [LNQD]
57235
57163
-
Ala
GGC
[ENA]
¡û
>W1710979163
LPNT01000057
Bacillota
Lacticaseibacillus rhamnosus [LPNT]
105217
105289
+
Ala
GGC
[ENA]
¡û
>W1710979214
LPNU01000053
Bacillota
Lacticaseibacillus rhamnosus [LPNU]
58685
58757
+
Ala
GGC
[ENA]
¡û
>W1710979325
LPNW01000064
Bacillota
Lacticaseibacillus rhamnosus [LPNW]
105111
105183
+
Ala
GGC
[ENA]
¡û
>W1711097178
LTIK01000131
Bacillota
Lactobacillus sp. HMSC078F07 [LTIK]
26894
26822
-
Ala
GGC
[ENA]
¡û
>W1711097443
LTIR01000088
Bacillota
Lactobacillus sp. HMSC077C11 [LTIR]
14520
14592
+
Ala
GGC
[ENA]
¡û
>W1711097834
LTJB01000011
Bacillota
Lactobacillus sp. HMSC064F12 [LTJB]
26771
26699
-
Ala
GGC
[ENA]
¡û
>W1711098177
LTJI01000153
Bacillota
Lactobacillus sp. HMSC068B07 [LTJI]
23202
23130
-
Ala
GGC
[ENA]
¡û
>W1711098514
LTJQ01000107
Bacillota
Lactobacillus sp. HMSC072E07 [LTJQ]
14165
14237
+
Ala
GGC
[ENA]
¡û
>W1711107617
LTSY01000131
Bacillota
Lactobacillus sp. HMSC073D04 [LTSY]
14509
14437
-
Ala
GGC
[ENA]
¡û
>W1711109884
LTVA01000163
Bacillota
Lactobacillus sp. HMSC075D02 [LTVA]
14517
14589
+
Ala
GGC
[ENA]
¡û
>W1711187426
LWPM01000007
Bacillota
Lactobacillus sp. HMSC25A02 [LWPM]
33261
33189
-
Ala
GGC
[ENA]
¡û
>W1711299240
MAGA01000073
Bacillota
Lacticaseibacillus rhamnosus [MAGA]
102669
102741
+
Ala
GGC
[ENA]
¡û
>W1711339124
MBTZ01000084
Bacillota
Lacticaseibacillus paracasei [MBTZ]
129187
129115
-
Ala
GGC
[ENA]
¡û
>W1711461623
MJHB01000007
Bacillota
Lacticaseibacillus rhamnosus [MJHB]
119503
119431
-
Ala
GGC
[ENA]
¡û
>W1711487404
MKFZ01000023
Bacillota
Lacticaseibacillus paracasei [MKFZ]
100815
100887
+
Ala
GGC
[ENA]
¡û
>W1711487445
MKGA01000001
Bacillota
Lacticaseibacillus paracasei [MKGA]
62285
62357
+
Ala
GGC
[ENA]
¡û
>W1711585978
MOAG01000140
Bacillota
Lacticaseibacillus paracasei casei [MOAG]
118439
118367
-
Ala
GGC
[ENA]
¡û
>W1711588936
MODS01000093
Bacillota
Lacticaseibacillus casei [MODS]
103436
103508
+
Ala
GGC
[ENA]
¡û
>W1711708103
MSTB01000028
Bacillota
Lacticaseibacillus rhamnosus [MSTB]
26128
26056
-
Ala
GGC
[ENA]
¡û
>W1711961557
NCSN01000021
Bacillota
Lacticaseibacillus paracasei [NCSN]
437496
437424
-
Ala
GGC
[ENA]
¡û
>W1711961583
NCSO01000018
Bacillota
Lacticaseibacillus paracasei [NCSO]
142012
141940
-
Ala
GGC
[ENA]
¡û
>W1711961636
NCSP01000006
Bacillota
Lacticaseibacillus paracasei [NCSP]
220173
220101
-
Ala
GGC
[ENA]
¡û
>W1711999814
NDXH01000004
Bacillota
Lacticaseibacillus paracasei [NDXH]
68558
68486
-
Ala
GGC
[ENA]
¡û
>C171030556
CP014201
Bacillota
Lacticaseibacillus rhamnosus BFE5264 [CP014201]
2913662
2913590
-
Ala
GGC
-
¡û
>C171034594
CP014985
Bacillota
Lacticaseibacillus paracasei IIA [CP014985]
1104927
1104999
+
Ala
GGC
-
¡û
>C171051646
CP016823
Bacillota
Lacticaseibacillus rhamnosus LRB [CP016823]
365622
365550
-
Ala
GGC
-
¡û
>C171118745
CP021426
Bacillota
Lacticaseibacillus rhamnosus 4B15 [CP021426]
661106
661178
+
Ala
GGC
-
¡û
>W131044753
AMQX01000004
Bacillota
Lacticaseibacillus rhamnosus LRHMDP3 [AMQX]
44702
44774
+
Ala
GGC
[ENA]
¡û
>W131062316
ANJS01000038
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp219 [ANJS]
14127
14055
-
Ala
GGC
[ENA]
¡û
>W131062365
ANJT01000064
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp229 [ANJT]
12534
12462
-
Ala
GGC
[ENA]
¡û
>W131062398
ANJU01000001
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp74 [ANJU]
21949
22021
+
Ala
GGC
[ENA]
¡û
>W131062506
ANJW01000819
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp123 [ANJW]
14970
15042
+
Ala
GGC
[ENA]
¡û
>W131062531
ANJX01000172
Bacillota
Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270 [ANJX]
2714
2642
-
Ala
GGC
[ENA]
¡û
>W131062579
ANJY01000041
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp189 [ANJY]
15281
15353
+
Ala
GGC
[ENA]
¡û
>W131062709
ANKA01000069
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp228 [ANKA]
833
905
+
Ala
GGC
[ENA]
¡û
>W131062770
ANKC01000715
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp126 [ANKC]
893
965
+
Ala
GGC
[ENA]
¡û
>W131062883
ANKF01000068
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp221 [ANKF]
532
604
+
Ala
GGC
[ENA]
¡û
>W131062916
ANKG01000003
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp37 [ANKG]
29120
29192
+
Ala
GGC
[ENA]
¡û
>W131062983
ANKH01000282
Bacillota
Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649 [ANKH]
973
1045
+
Ala
GGC
[ENA]
¡û
>W131063053
ANKJ01000006
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp49 [ANKJ]
100576
100648
+
Ala
GGC
[ENA]
¡û
>W131063102
ANKK01000234
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp227 [ANKK]
18941
19013
+
Ala
GGC
[ENA]
¡û
>W131063133
ANKL01000255
Bacillota
Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648 [ANKL]
1017
1089
+
Ala
GGC
[ENA]
¡û
>W131063209
ANKM01000145
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp125 [ANKM]
979
1051
+
Ala
GGC
[ENA]
¡û
>W131063573
ANKY01000109
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp230 [ANKY]
12917
12845
-
Ala
GGC
[ENA]
¡û
>W131063690
ANLE01000327
Bacillota
Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877 [ANLE]
10078
10006
-
Ala
GGC
[ENA]
¡û
>W131063730
ANLF01000114
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp70 [ANLF]
6512
6440
-
Ala
GGC
[ENA]
¡û
>W131063783
ANLG01000832
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp48 [ANLG]
152
224
+
Ala
GGC
[ENA]
¡û
>W131064682
ANMH01000046
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp17 [ANMH]
98244
98316
+
Ala
GGC
[ENA]
¡û
>W131064782
ANMJ01000033
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp46 [ANMJ]
20595
20523
-
Ala
GGC
[ENA]
¡û
>W131064857
ANML01000014
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp223 [ANML]
101650
101722
+
Ala
GGC
[ENA]
¡û
>W131064898
ANMM01000008
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp225 [ANMM]
75198
75126
-
Ala
GGC
[ENA]
¡û
>W131064950
ANMN01000005
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp226 [ANMN]
100539
100611
+
Ala
GGC
[ENA]
¡û
>W131156292
AQPP01000006
Bacillota
Lacticaseibacillus paracasei LcA [AQPP]
149107
149035
-
Ala
GGC
[ENA]
¡û
>W131181313
ARNV01000003
Bacillota
Lacticaseibacillus paracasei LcY [ARNV]
480943
480871
-
Ala
GGC
[ENA]
¡û
>C011495
CP000423
Bacillota
Lacticaseibacillus paracasei ATCC 334 [CP000423]
722825
722753
-
Ala
GGC
[Ensembl]
¡û
>W141004314
AFYJ01000006
Bacillota
Lacticaseibacillus casei 12A [AFYJ]
68678
68606
-
Ala
GGC
[ENA]
¡û
>W141004370
AFYK01000015
Bacillota
Lacticaseibacillus casei 1·î21Æü [AFYK]
109758
109686
-
Ala
GGC
[ENA]
¡û
>W141004424
AFYL01000012
Bacillota
Lacticaseibacillus paracasei 32G [AFYL]
36943
36871
-
Ala
GGC
[ENA]
¡û
>W141004478
AFYM01000020
Bacillota
Lacticaseibacillus casei A2-362 [AFYM]
129900
129828
-
Ala
GGC
[ENA]
¡û
>W141004534
AFYN01000014
Bacillota
Lacticaseibacillus paracasei CRF28 [AFYN]
142324
142252
-
Ala
GGC
[ENA]
¡û
>W141004597
AFYO01000024
Bacillota
Lacticaseibacillus paracasei M36 [AFYO]
98836
98908
+
Ala
GGC
[ENA]
¡û
>W141004643
AFYP01000018
Bacillota
Lacticaseibacillus paracasei T71499 [AFYP]
68515
68443
-
Ala
GGC
[ENA]
¡û
>W141004781
AFYR01000038
Bacillota
Lacticaseibacillus paracasei UW1 [AFYR]
2585
2513
-
Ala
GGC
[ENA]
¡û
>W141004864
AFYT01000011
Bacillota
Lacticaseibacillus paracasei Lc-10 [AFYT]
137745
137673
-
Ala
GGC
[ENA]
¡û
>W141004963
AFYU01000127
Bacillota
Lacticaseibacillus paracasei Lpc-37 [AFYU]
137608
137536
-
Ala
GGC
[ENA]
¡û
>WENV180137377
OATO01013759
[OATO] human gut metagenome; faeces
279
351
+
Ala
GGC
[ENA]
¢þ
>WENV180143677
OATY01000047
[OATY] human gut metagenome; faeces
14618
14690
+
Ala
GGC
[ENA]
¢þ
>WENV180171835
OAVX01000024
[OAVX] human gut metagenome; faeces
99689
99761
+
Ala
GGC
[ENA]
¢þ
>WENV180172767
OAVY01000011
[OAVY] human gut metagenome; faeces
127025
126953
-
Ala
GGC
[ENA]
¢þ
>WENV180184009
OAWR01000193
[OAWR] human gut metagenome; faeces
9384
9456
+
Ala
GGC
[ENA]
¢þ
>WENV180408337
OBUS01000573
[OBUS] human gut metagenome; faeces
12927
12999
+
Ala
GGC
[ENA]
¢þ
>WENV180420812
OBVP01000067
[OBVP] human gut metagenome; faeces
56115
56043
-
Ala
GGC
[ENA]
¢þ
>WENV180439099
OBWS01007183
[OBWS] human gut metagenome; faeces
1012
940
-
Ala
GGC
[ENA]
¢þ
>WENV180439103
OBWS01007232
[OBWS] human gut metagenome; faeces
1012
940
-
Ala
GGC
[ENA]
¢þ
>WENV180440430
OBWV01000370
[OBWV] human gut metagenome; faeces
6232
6160
-
Ala
GGC
[ENA]
¢þ
>WENV180442466
OBWX01000022
[OBWX] human gut metagenome; faeces
60676
60604
-
Ala
GGC
[ENA]
¢þ
>WENV180444267
OBWZ01000431
[OBWZ] human gut metagenome; faeces
6835
6907
+
Ala
GGC
[ENA]
¢þ
>WENV180459752
OBXX01014888
[OBXX] human gut metagenome; faeces
375
447
+
Ala
GGC
[ENA]
¢þ
>WENV180467864
OBYJ01000063
[OBYJ] human gut metagenome; faeces
68715
68643
-
Ala
GGC
[ENA]
¢þ
>WENV180481935
OBZF01020926
[OBZF] human gut metagenome; faeces
160
88
-
Ala
GGC
[ENA]
¢þ
>WENV180486677
OBZN01000023
[OBZN] human gut metagenome; faeces
40449
40521
+
Ala
GGC
[ENA]
¢þ
>W141047276
AMQW01000001
Bacillota
Lacticaseibacillus rhamnosus LRHMDP2 [AMQW]
379254
379182
-
Ala
GGC
[ENA]
¡û
>WENV180492012
OBZW01000174
[OBZW] human gut metagenome; faeces
20659
20587
-
Ala
GGC
[ENA]
¢þ
>W08010403
ABQV01000057
Bacillota
Lacticaseibacillus paracasei subsp. paracasei 8700:2 [ABQV]
68325
68253
-
Ala
GGC
[ENA]
¡û
>W141091252
AUYM01000069
Bacillota
Lacticaseibacillus paracasei 5b [AUYM]
99672
99744
+
Ala
GGC
[ENA]
¡û
>WENV181216948
OFCG01005920
[OFCG] metagenome; Human gut stool
670
598
-
Ala
GGC
[ENA]
¢þ
>WENV181221351
OFCU01004664
[OFCU] metagenome; Human gut stool
645
573
-
Ala
GGC
[ENA]
¢þ
>W141149570
AWZQ01000029
Bacillota
Lacticaseibacillus paracasei 12A [AWZQ]
2728
2800
+
Ala
GGC
[ENA]
¡û
>W141207931
AZOE01000001
Bacillota
Lacticaseibacillus casei A2-362 [AZOE]
130264
130192
-
Ala
GGC
[ENA]
¡û
>W141224167
BAGT01000074
Bacillota
Lacticaseibacillus paracasei COM0101 [BAGT]
58851
58923
+
Ala
GGC
[ENA]
¡û
>WENV182804434
OJUV01000010
[OJUV] human gut metagenome; human gut
89300
89372
+
Ala
GGC
[ENA]
¢þ
>WENV182807989
OJWB01000005
[OJWB] human gut metagenome; human gut
93050
92978
-
Ala
GGC
[ENA]
¢þ
>WENV182820010
OKAI01000049
[OKAI] human gut metagenome; human gut
43673
43601
-
Ala
GGC
[ENA]
¢þ
>WENV182821686
OKBA01000074
[OKBA] human gut metagenome; human gut
2147
2075
-
Ala
GGC
[ENA]
¢þ
>WENV182830441
OKDZ01000011
[OKDZ] human gut metagenome; human gut
2159
2087
-
Ala
GGC
[ENA]
¢þ
>WENV182831652
OKEG01000084
[OKEG] human gut metagenome; human gut
28709
28781
+
Ala
GGC
[ENA]
¢þ
>WENV182832006
OKEJ01000032
[OKEJ] human gut metagenome; human gut
69630
69702
+
Ala
GGC
[ENA]
¢þ
>WENV182837726
OKGM01000011
[OKGM] human gut metagenome; human gut
104908
104980
+
Ala
GGC
[ENA]
¢þ
>WENV182855118
OKMY01000062
[OKMY] human gut metagenome; human gut
43673
43601
-
Ala
GGC
[ENA]
¢þ
>WENV182858606
OKOF01000151
[OKOF] human gut metagenome; human gut
7337
7265
-
Ala
GGC
[ENA]
¢þ
>WENV182860090
OKOR01000079
[OKOR] human gut metagenome; human gut
2146
2074
-
Ala
GGC
[ENA]
¢þ
>WENV182861362
OKPE01000502
[OKPE] human gut metagenome; human gut
932
1004
+
Ala
GGC
[ENA]
¢þ
>WENV182941508
OKVG01002271
[OKVG] human gut metagenome; human gut
6421
6349
-
Ala
GGC
[ENA]
¢þ
>WENV182941661
OKVG01004993
[OKVG] human gut metagenome; human gut
2771
2843
+
Ala
GGC
[ENA]
¢þ
>WENV182944135
OKVI01005188
[OKVI] human gut metagenome; human gut
456
384
-
Ala
GGC
[ENA]
¢þ
>WENV182944380
OKVI01026976
[OKVI] human gut metagenome; human gut
428
356
-
Ala
GGC
[ENA]
¢þ
>WENV183101198
OLNG01007876
[OLNG] human gut metagenome; faeces
1382
1310
-
Ala
GGC
[ENA]
¢þ
>WENV183130856
OLOA01006561
[OLOA] human gut metagenome; faeces
4221
4293
+
Ala
GGC
[ENA]
¢þ
>WENV183149754
OLOO01019566
[OLOO] human gut metagenome; faeces
1066
1138
+
Ala
GGC
[ENA]
¢þ
>C08005916
FM177140
Bacillota
Lacticaseibacillus paracasei BL23 [FM177140]
784571
784499
-
Ala
GGC
[Ensembl]
¡û
>WENV183789066
PPYF01375025
[PPYF] human gut metagenome; stool from patient with Crohn's disease
105
177
+
Ala
GGC
[ENA]
¢þ
>W141383422
JDFQ01000003
Bacillota
Lacticaseibacillus rhamnosus PEL5 [JDFQ]
119611
119539
-
Ala
GGC
[ENA]
¡û
>W141383463
JDFR01000005
Bacillota
Lacticaseibacillus rhamnosus PEL6 [JDFR]
17580
17652
+
Ala
GGC
[ENA]
¡û
>C181019597
CP016355
Bacillota
Lacticaseibacillus paracasei subsp. paracasei TMW 1.1434 [CP016355]
851624
851552
-
Ala
GGC
-
¡û
>C181023046
CP017063
Bacillota
Lacticaseibacillus rhamnosus LR5 [CP017063]
653820
653748
-
Ala
GGC
-
¡û
>C181027816
CP017716
Bacillota
Lacticaseibacillus paracasei TK1501 [CP017716]
698128
698056
-
Ala
GGC
-
¡û
>C181119651
CP025582
Bacillota
Lacticaseibacillus paracasei HD1.7 [CP025582]
786087
786015
-
Ala
GGC
-
¡û
>C181127762
CP026097
Bacillota
Lacticaseibacillus paracasei HDS-01 [CP026097]
786101
786029
-
Ala
GGC
-
¡û
>C181179733
CP029536
Bacillota
Lacticaseibacillus paracasei LC355 [CP029536]
1820005
1819933
-
Ala
GGC
-
¡û
>C181183664
CP029686
Bacillota
Lacticaseibacillus paracasei Lpc10 [CP029686]
754704
754776
+
Ala
GGC
-
¡û
>C181198827
CP031290
Bacillota
Lacticaseibacillus rhamnosus GG [CP031290]
720728
720656
-
Ala
GGC
-
¡û
>C191034483
CP025428
Bacillota
Lacticaseibacillus rhamnosus LR-B1 [CP025428]
720623
720551
-
Ala
GGC
-
¡û
>C191035794
CP025499
Bacillota
Lacticaseibacillus paracasei subsp. tolerans AO356 [CP025499]
769267
769195
-
Ala
GGC
-
¡û
>C191092738
CP032637
Bacillota
Lacticaseibacillus paracasei ZFM54 [CP032637]
1158343
1158415
+
Ala
GGC
-
¡û
>C191144755
CP035563
Bacillota
Lacticaseibacillus paracasei SRCM103299 [CP035563]
800368
800296
-
Ala
GGC
-
¡û
>C191182677
CP040780
Bacillota
Lacticaseibacillus rhamnosus 1.0320 [CP040780]
1161929
1161857
-
Ala
GGC
-
¡û
>W09101822
AAGR01000024
Bacillota
Lacticaseibacillus paracasei ATCC 334 [AAGR]
6016
6088
+
Ala
GGC
[ENA]
¡û
>W141811537
JPZB01000002
Bacillota
Lacticaseibacillus rhamnosus [JPZB]
191790
191718
-
Ala
GGC
[ENA]
¡û
>C141000840
CP002391
Bacillota
Lacticaseibacillus paracasei subsp. paracasei 8700:2 [CP002391]
672230
672158
-
Ala
GGC
[Ensembl]
¡û
>W1910612570
LGIY01000006
Bacillota
Lacticaseibacillus paracasei CCC B1205 [LGIY]
25313
25241
-
Ala
GGC
[ENA]
¡û
>W1910621164
LKFC01000001
Bacillota
Lacticaseibacillus paracasei FAM10859 [LKFC]
552731
552659
-
Ala
GGC
[ENA]
¡û
>W1910621388
LKFG01000030
Bacillota
Lacticaseibacillus paracasei FAM18108 [LKFG]
126768
126696
-
Ala
GGC
[ENA]
¡û
>W1910621549
LKFJ01000025
Bacillota
Lacticaseibacillus paracasei FAM18119 [LKFJ]
44364
44292
-
Ala
GGC
[ENA]
¡û
>W1910621637
LKFK01000013
Bacillota
Lacticaseibacillus paracasei FAM18121 [LKFK]
141425
141353
-
Ala
GGC
[ENA]
¡û
>W1910622251
LKFW01000021
Bacillota
Lacticaseibacillus paracasei FAM19317 [LKFW]
88743
88671
-
Ala
GGC
[ENA]
¡û
>W1910622305
LKFX01000017
Bacillota
Lacticaseibacillus paracasei FAM19353 [LKFX]
148947
148875
-
Ala
GGC
[ENA]
¡û
>W1910622412
LKFZ01000022
Bacillota
Lacticaseibacillus paracasei FAM22276 [LKFZ]
46185
46113
-
Ala
GGC
[ENA]
¡û
>W1910622704
LKGE01000001
Bacillota
Lacticaseibacillus paracasei FAM3228 [LKGE]
519635
519563
-
Ala
GGC
[ENA]
¡û
>W1910622737
LKGF01000021
Bacillota
Lacticaseibacillus paracasei FAM3248 [LKGF]
46185
46113
-
Ala
GGC
[ENA]
¡û
>W1910622846
LKGH01000014
Bacillota
Lacticaseibacillus paracasei FAM4067 [LKGH]
186068
185996
-
Ala
GGC
[ENA]
¡û
>W1910622951
LKGJ01000015
Bacillota
Lacticaseibacillus paracasei FAM6161 [LKGJ]
142131
142059
-
Ala
GGC
[ENA]
¡û
>W1910623193
LKGN01000023
Bacillota
Lacticaseibacillus paracasei FAM8140 [LKGN]
137712
137640
-
Ala
GGC
[ENA]
¡û
>W1910623222
LKGO01000028
Bacillota
Lacticaseibacillus paracasei FAM8374 [LKGO]
132011
131939
-
Ala
GGC
[ENA]
¡û
>W1910797121
MSSM01000038
Bacillota
Lacticaseibacillus chiayiensis NCYUAS [MSSM]
1142
1070
-
Ala
GGC
[ENA]
¡û
>W1910923308
NIGW01000002
Bacillota
Lacticaseibacillus paracasei LMG S-29188 [NIGW]
137347
137275
-
Ala
GGC
[ENA]
¡û
>W1911118079
NOKL01000002
Bacillota
Lacticaseibacillus paracasei Lpc-37 [NOKL]
2672001
2671929
-
Ala
GGC
[ENA]
¡û
>W1911138941
NOXN01000111
Bacillota
Lacticaseibacillus chiayiensis NRIC 1947 [NOXN]
2084
2156
+
Ala
GGC
[ENA]
¡û
>W1911161562
NPOB01000051
Bacillota
Lacticaseibacillus paracasei subsp. paracasei NTU 101 [NPOB]
47143
47071
-
Ala
GGC
[ENA]
¡û
>W1911422778
NXES01000011
Bacillota
Lacticaseibacillus paracasei B3 [NXES]
40641
40713
+
Ala
GGC
[ENA]
¡û
>W1911422833
NXET01000014
Bacillota
Lacticaseibacillus paracasei B2 [NXET]
18517
18589
+
Ala
GGC
[ENA]
¡û
>W1911587112
PJQS01000007
Bacillota
Lacticaseibacillus rhamnosus LR-B2 [PJQS]
119734
119662
-
Ala
GGC
[ENA]
¡û
>W1911587131
PJQT01000004
Bacillota
Lacticaseibacillus rhamnosus LR-CVC [PJQT]
119901
119829
-
Ala
GGC
[ENA]
¡û
>W1911587183
PJQU01000007
Bacillota
Lacticaseibacillus rhamnosus LR-GG-MoProbi [PJQU]
17582
17654
+
Ala
GGC
[ENA]
¡û
>W1911587257
PJQV01000013
Bacillota
Lacticaseibacillus rhamnosus LR-S [PJQV]
58082
58154
+
Ala
GGC
[ENA]
¡û
>W1911722529
QRBH01000006
Bacillota
Lacticaseibacillus paracasei DTA83 [QRBH]
98405
98477
+
Ala
GGC
[ENA]
¡û
>W1911767434
QXET01000010
Bacillota
Lacticaseibacillus paracasei TJB4 [QXET]
8146
8074
-
Ala
GGC
[ENA]
¡û
>W1810190511
PKJX01000004
Bacillota
Lacticaseibacillus rhamnosus UMB0004 [PKJX]
127303
127231
-
Ala
GGC
[ENA]
¡û
>W1810195078
PKQJ01000002
Bacillota
Lacticaseibacillus paracasei DUP 13076 [PKQJ]
101866
101938
+
Ala
GGC
[ENA]
¡û
>W1810452801
PZQM01000006
Bacillota
Lacticaseibacillus rhamnosus LR2 [PZQM]
113373
113301
-
Ala
GGC
[ENA]
¡û
>W1810473910
QAHU01000004
Bacillota
Lactobacillus sp. DS2_6 [QAHU]
22068
22140
+
Ala
GGC
[ENA]
¡û
>W1810474181
QAHZ01000004
Bacillota
Lactobacillus sp. DS1_6 [QAHZ]
22068
22140
+
Ala
GGC
[ENA]
¡û
>W1810488363
QAZI01000002
Bacillota
Lacticaseibacillus rhamnosus DS4_11 [QAZI]
102637
102709
+
Ala
GGC
[ENA]
¡û
>W1810489434
QBAA01000003
Bacillota
Lactobacillus sp. DS13_6 [QBAA]
22068
22140
+
Ala
GGC
[ENA]
¡û
>W1810705329
QMJF01000008
Bacillota
Lacticaseibacillus paracasei subsp. paracasei KMB_598 [QMJF]
68586
68514
-
Ala
GGC
[ENA]
¡û
>W1810907588
QVHW01000005
Bacillota
Lacticaseibacillus paracasei AM33-2AC [QVHW]
138664
138592
-
Ala
GGC
[ENA]
¡û
>C151010785
CP006690
Bacillota
Lacticaseibacillus casei 12A [CP006690]
675931
675859
-
Ala
GGC
[Ensembl]
¡û
>C151091747
CP012148
Bacillota
Lacticaseibacillus paracasei L9 [CP012148]
790318
790246
-
Ala
GGC
-
¡û
>W1510005460
BAYM01000381
Bacillota
Lacticaseibacillus paracasei NRIC 0644 NRIC0644 [BAYM]
36132
36204
+
Ala
GGC
[ENA]
¡û
>W1510005463
BAYN01000032
Bacillota
Lacticaseibacillus paracasei NRIC 1917 NRIC1917 [BAYN]
6360
6288
-
Ala
GGC
[ENA]
¡û
>C10108269
CP001084
Bacillota
Lacticaseibacillus paracasei Zhang [CP001084]
672916
672844
-
Ala
GGC
[Ensembl]
¡û
>C10108891
FM179322
Bacillota
Lacticaseibacillus rhamnosus GG [FM179322]
720725
720653
-
Ala
GGC
-
¡û
>C10108949
AP011548
Bacillota
Lacticaseibacillus rhamnosus GG ATCC 53103 [AP011548]
718166
718094
-
Ala
GGC
-
¡û
>C11112362
CP002618
Bacillota
Lacticaseibacillus paracasei BD-II [CP002618]
776552
776480
-
Ala
GGC
[Ensembl]
¡û
>C11112420
CP002616
Bacillota
Lacticaseibacillus paracasei LC2W [CP002616]
786661
786589
-
Ala
GGC
[Ensembl]
¡û
>W1511397806
JTDC01000012
Bacillota
Lacticaseibacillus rhamnosus 116 [JTDC]
16951
17023
+
Ala
GGC
[ENA]
¡û
>W1511435201
JUIL01000323
Bacillota
Lacticaseibacillus rhamnosus Lr071 [JUIL]
10024
10096
+
Ala
GGC
[ENA]
¡û
>W1511435213
JUIM01000002
Bacillota
Lacticaseibacillus rhamnosus Lr044 [JUIM]
3266
3338
+
Ala
GGC
[ENA]
¡û
>W1511440318
JUPA01000166
Bacillota
Lacticaseibacillus rhamnosus 893_LRHA [JUPA]
16785
16857
+
Ala
GGC
[ENA]
¡û
>W1511443538
JUTB01000105
Bacillota
Lacticaseibacillus rhamnosus 784_LRHA [JUTB]
16785
16857
+
Ala
GGC
[ENA]
¡û
>W1511445912
JUWG01000111
Bacillota
Lacticaseibacillus rhamnosus 708_LRHA [JUWG]
14711
14783
+
Ala
GGC
[ENA]
¡û
>W1511446186
JUWQ01000170
Bacillota
Lacticaseibacillus rhamnosus 699_LRHA [JUWQ]
8956
8884
-
Ala
GGC
[ENA]
¡û
>W1511452017
JVDQ01000061
Bacillota
Lacticaseibacillus paracasei 525_LPAR [JVDQ]
12523
12595
+
Ala
GGC
[ENA]
¡û
>W1511460712
JVLT01000019
Bacillota
Lacticaseibacillus rhamnosus 319_LRHA [JVLT]
96320
96248
-
Ala
GGC
[ENA]
¡û
>W1511462347
JVNI01000086
Bacillota
Lacticaseibacillus paracasei 275_LPAR [JVNI]
56043
55971
-
Ala
GGC
[ENA]
¡û
>W1511522425
JYBD01000003
Bacillota
Lacticaseibacillus paracasei DSM 20207 [JYBD]
57908
57836
-
Ala
GGC
[ENA]
¡û
>W1511685040
LFNB01000003
Bacillota
Lacticaseibacillus rhamnosus 313 [LFNB]
119610
119538
-
Ala
GGC
[ENA]
¡û
>W1610030524
AYTQ01000059
Bacillota
Lacticaseibacillus rhamnosus L31 [AYTQ]
21388
21316
-
Ala
GGC
[ENA]
¡û
>W1610032912
AZCO01000004
Bacillota
Lacticaseibacillus casei DSM 20011 = JCM 1134 [AZCO]
118485
118413
-
Ala
GGC
[ENA]
¡û
>C131015572
CP005486
Bacillota
Lacticaseibacillus paracasei LOCK919 [CP005486]
829118
829046
-
Ala
GGC
[Ensembl]
¡û
>C131020210
HE970764
Bacillota
Lacticaseibacillus paracasei W56 [HE970764]
782929
782857
-
Ala
GGC
[Ensembl]
¡û
>W1610543271
JTHQ01000047
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
1064
992
-
Ala
GGC
[ENA]
¡û
>W1610543320
JTHR01000042
Bacillota
Lacticaseibacillus rhamnosus [JTHR]
304
232
-
Ala
GGC
[ENA]
¡û
>W1610543372
JTHS01000039
Bacillota
Lacticaseibacillus rhamnosus [JTHS]
385
313
-
Ala
GGC
[ENA]
¡û
>W1610543562
JTHW01000008
Bacillota
Lacticaseibacillus rhamnosus [JTHW]
78922
78850
-
Ala
GGC
[ENA]
¡û
>W1610544272
JTIK01000126
Bacillota
Lacticaseibacillus rhamnosus [JTIK]
10013
9941
-
Ala
GGC
[ENA]
¡û
>W1610544320
JTIL01000033
Bacillota
Lacticaseibacillus rhamnosus [JTIL]
19913
19985
+
Ala
GGC
[ENA]
¡û
>W1610544352
JTIM01000004
Bacillota
Lacticaseibacillus rhamnosus [JTIM]
17572
17644
+
Ala
GGC
[ENA]
¡û
>W1610544422
JTIN01000044
Bacillota
Lacticaseibacillus rhamnosus [JTIN]
8322
8250
-
Ala
GGC
[ENA]
¡û
>W1610544464
JTIO01000091
Bacillota
Lacticaseibacillus rhamnosus [JTIO]
65528
65456
-
Ala
GGC
[ENA]
¡û
>W1610544539
JTIQ01000005
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
24213
24141
-
Ala
GGC
[ENA]
¡û
>W1610544693
JTIT01000008
Bacillota
Lacticaseibacillus rhamnosus [JTIT]
127090
127018
-
Ala
GGC
[ENA]
¡û
>W1610544804
JTIV01000260
Bacillota
Lacticaseibacillus rhamnosus [JTIV]
972
900
-
Ala
GGC
[ENA]
¡û
>W1610544823
JTIW01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIW]
19917
19989
+
Ala
GGC
[ENA]
¡û
>W1610544877
JTIX01000026
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
19917
19989
+
Ala
GGC
[ENA]
¡û
>W1610547469
JUIS01000864
Bacillota
Lacticaseibacillus rhamnosus [JUIS]
2856
2784
-
Ala
GGC
[ENA]
¡û
>W1610585979
LDEJ01000028
Bacillota
Lacticaseibacillus paracasei casei [LDEJ]
20897
20825
-
Ala
GGC
[ENA]
¡û
>W1610767421
LNQD01000052
Bacillota
Lacticaseibacillus paracasei casei [LNQD]
57235
57163
-
Ala
GGC
[ENA]
¡û
>W1710027647
AYTQ01000059
Bacillota
Lacticaseibacillus rhamnosus L31 [AYTQ]
21388
21316
-
Ala
GGC
[ENA]
¡û
>W1710030243
AZCO01000004
Bacillota
Lacticaseibacillus casei DSM 20011 = JCM 1134 [AZCO]
118485
118413
-
Ala
GGC
[ENA]
¡û
>W1710082937
BDIT01000006
Bacillota
Lacticaseibacillus paracasei [BDIT]
141351
141279
-
Ala
GGC
[ENA]
¡û
>W1710646402
JTHQ01000047
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
1064
992
-
Ala
GGC
[ENA]
¡û
>W1710646451
JTHR01000042
Bacillota
Lacticaseibacillus rhamnosus [JTHR]
304
232
-
Ala
GGC
[ENA]
¡û
>W1710646503
JTHS01000039
Bacillota
Lacticaseibacillus rhamnosus [JTHS]
385
313
-
Ala
GGC
[ENA]
¡û
>W1710646693
JTHW01000008
Bacillota
Lacticaseibacillus rhamnosus [JTHW]
78922
78850
-
Ala
GGC
[ENA]
¡û
>W1710647403
JTIK01000126
Bacillota
Lacticaseibacillus rhamnosus [JTIK]
10013
9941
-
Ala
GGC
[ENA]
¡û
>W1710647451
JTIL01000033
Bacillota
Lacticaseibacillus rhamnosus [JTIL]
19913
19985
+
Ala
GGC
[ENA]
¡û
>W1710647483
JTIM01000004
Bacillota
Lacticaseibacillus rhamnosus [JTIM]
17572
17644
+
Ala
GGC
[ENA]
¡û
>W1710647553
JTIN01000044
Bacillota
Lacticaseibacillus rhamnosus [JTIN]
8322
8250
-
Ala
GGC
[ENA]
¡û
>W1710647595
JTIO01000091
Bacillota
Lacticaseibacillus rhamnosus [JTIO]
65528
65456
-
Ala
GGC
[ENA]
¡û
>W1710647670
JTIQ01000005
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
24213
24141
-
Ala
GGC
[ENA]
¡û
>W1710647824
JTIT01000008
Bacillota
Lacticaseibacillus rhamnosus [JTIT]
127090
127018
-
Ala
GGC
[ENA]
¡û
>W1710647935
JTIV01000260
Bacillota
Lacticaseibacillus rhamnosus [JTIV]
972
900
-
Ala
GGC
[ENA]
¡û
>W1710647954
JTIW01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIW]
19917
19989
+
Ala
GGC
[ENA]
¡û
>W1710648008
JTIX01000026
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
19917
19989
+
Ala
GGC
[ENA]
¡û
>W1710650652
JUIS01000864
Bacillota
Lacticaseibacillus rhamnosus [JUIS]
2856
2784
-
Ala
GGC
[ENA]
¡û
>W1710705259
LDEJ01000028
Bacillota
Lacticaseibacillus paracasei casei [LDEJ]
20897
20825
-
Ala
GGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
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Genome/Seq. Info.
Decision
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Representative sequence of each cluster
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