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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.458833 (227 seq.)
>W1711112595
LTXO01000113
Actinomycetota
Actinomyces sp. HMSC075C01 [LTXO]
12927
13002
+
Ala
TGC
[ENA]
¡û
>W1711138022
LVCF01000037
Actinomycetota
Branchiibius sp. NY16-3462-2 [LVCF]
5941
5866
-
Ala
TGC
[ENA]
¡û
>W1711186060
LWNX01000014
Actinomycetota
Actinomyces sp. HMSC08A09 [LWNX]
11731
11656
-
Ala
TGC
[ENA]
¡û
>W1711313923
MAUB01000471
Actinomycetota
Actinomyces oris [MAUB]
6309
6384
+
Ala
TGC
[ENA]
¡û
>W1711505509
MKVO01000009
Actinomycetota
Micrococcales bacterium 73-15 [MKVO]
11962
11887
-
Ala
TGC
[ENA]
¡û
>W1711693776
MSGO01000062
Actinomycetota
Actinomyces oris [MSGO]
20593
20668
+
Ala
TGC
[ENA]
¡û
>W1711697365
MSKI01000021
Actinomycetota
Actinomyces oris [MSKI]
48929
49004
+
Ala
TGC
[ENA]
¡û
>W1711697439
MSKJ01000013
Actinomycetota
Actinomyces oris [MSKJ]
131813
131888
+
Ala
TGC
[ENA]
¡û
>W1711697502
MSKK01000050
Actinomycetota
Actinomyces oris [MSKK]
26278
26203
-
Ala
TGC
[ENA]
¡û
>W1711697535
MSKL01000012
Actinomycetota
Actinomyces oris [MSKL]
116562
116637
+
Ala
TGC
[ENA]
¡û
>W1711697584
MSKM01000026
Actinomycetota
Actinomyces oris [MSKM]
11567
11492
-
Ala
TGC
[ENA]
¡û
>W1711697645
MSKN01000053
Actinomycetota
Actinomyces oris [MSKN]
19801
19726
-
Ala
TGC
[ENA]
¡û
>W1711697686
MSKO01000057
Actinomycetota
Actinomyces oris [MSKO]
11649
11574
-
Ala
TGC
[ENA]
¡û
>W1711697731
MSKP01000026
Actinomycetota
Actinomyces oris [MSKP]
30700
30625
-
Ala
TGC
[ENA]
¡û
>W1711697781
MSKQ01000071
Actinomycetota
Actinomyces oris [MSKQ]
20343
20268
-
Ala
TGC
[ENA]
¡û
>W1711697793
MSKR01000002
Actinomycetota
Actinomyces oris [MSKR]
107981
108056
+
Ala
TGC
[ENA]
¡û
>W1711697876
MSKS01000033
Actinomycetota
Actinomyces oris [MSKS]
26636
26711
+
Ala
TGC
[ENA]
¡û
>W1711697896
MSKT01000009
Actinomycetota
Actinomyces oris [MSKT]
103236
103311
+
Ala
TGC
[ENA]
¡û
>W1711697983
MSKV01000001
Actinomycetota
Actinomyces oris [MSKV]
49409
49334
-
Ala
TGC
[ENA]
¡û
>W1711698043
MSKW01000009
Actinomycetota
Actinomyces oris [MSKW]
83062
83137
+
Ala
TGC
[ENA]
¡û
>W1711698090
MSKX01000009
Actinomycetota
Actinomyces naeslundii [MSKX]
21336
21411
+
Ala
TGC
[ENA]
¡û
>W1711698123
MSKY01000001
Actinomycetota
Actinomyces naeslundii [MSKY]
130133
130208
+
Ala
TGC
[ENA]
¡û
>W1711698173
MSKZ01000001
Actinomycetota
Actinomyces naeslundii [MSKZ]
68580
68505
-
Ala
TGC
[ENA]
¡û
>W1711698238
MSLA01000005
Actinomycetota
Actinomyces naeslundii [MSLA]
61631
61556
-
Ala
TGC
[ENA]
¡û
>W1711698309
MSLB01000020
Actinomycetota
Actinomyces naeslundii [MSLB]
30402
30327
-
Ala
TGC
[ENA]
¡û
>W1711705136
MSQE01000005
Actinomycetota
Actinomyces oris [MSQE]
11371
11296
-
Ala
TGC
[ENA]
¡û
>W1711706700
MSRH01000029
Actinomycetota
Actinomyces naeslundii [MSRH]
97684
97759
+
Ala
TGC
[ENA]
¡û
>W1711706753
MSRI01000029
Actinomycetota
Actinomyces naeslundii [MSRI]
92638
92713
+
Ala
TGC
[ENA]
¡û
>W1711706780
MSRJ01000005
Actinomycetota
Actinomyces naeslundii [MSRJ]
123069
122994
-
Ala
TGC
[ENA]
¡û
>W1711706816
MSRK01000006
Actinomycetota
Actinomyces naeslundii [MSRK]
50583
50658
+
Ala
TGC
[ENA]
¡û
>W1711706871
MSRL01000012
Actinomycetota
Actinomyces naeslundii [MSRL]
58231
58156
-
Ala
TGC
[ENA]
¡û
>W1711706910
MSRM01000002
Actinomycetota
Actinomyces naeslundii [MSRM]
56620
56545
-
Ala
TGC
[ENA]
¡û
>W1711706991
MSRN01000020
Actinomycetota
Actinomyces naeslundii [MSRN]
25302
25227
-
Ala
TGC
[ENA]
¡û
>W1711707010
MSRO01000010
Actinomycetota
Actinomyces naeslundii [MSRO]
99311
99386
+
Ala
TGC
[ENA]
¡û
>W1711707077
MSRP01000010
Actinomycetota
Actinomyces naeslundii [MSRP]
57695
57620
-
Ala
TGC
[ENA]
¡û
>W1711707103
MSRQ01000001
Actinomycetota
Actinomyces naeslundii [MSRQ]
57043
56968
-
Ala
TGC
[ENA]
¡û
>W1711707190
MSRR01000023
Actinomycetota
Actinomyces naeslundii [MSRR]
27639
27714
+
Ala
TGC
[ENA]
¡û
>W1711707238
MSRS01000024
Actinomycetota
Actinomyces naeslundii [MSRS]
25319
25244
-
Ala
TGC
[ENA]
¡û
>W1711707254
MSRT01000003
Actinomycetota
Actinomyces naeslundii [MSRT]
204210
204285
+
Ala
TGC
[ENA]
¡û
>W1711707311
MSRU01000008
Actinomycetota
Actinomyces naeslundii [MSRU]
25319
25244
-
Ala
TGC
[ENA]
¡û
>W1711724110
MTPX01000006
Actinomycetota
Actinomyces ruminis CtC 72 [MTPX]
24126
24199
+
Ala
TGC
[ENA]
¡û
>W1711774046
MVIV01000002
Actinomycetota
Actinomyces gaoshouyii pika_113 [MVIV]
327467
327540
+
Ala
TGC
[ENA]
¡û
>W1711774122
MVIW01000013
Actinomycetota
Actinomyces denticolens [MVIW]
69920
69847
-
Ala
TGC
[ENA]
¡û
>C171108504
CP020468
Actinomycetota
Actinomyces gaoshouyii pika_114 [CP020468]
11140
11213
+
Ala
TGC
-
¡û
>W131217122
ATWL01000004
Actinomycetota
Ruania albidiflava DSM 18029 [ATWL]
22389
22464
+
Ala
TGC
[ENA]
¡û
>W131221351
AUAK01000001
Actinomycetota
Actinomyces slackii ATCC 49928 [AUAK]
94333
94406
+
Ala
TGC
[ENA]
¡û
>WENV180190679
OAXA01000239
[OAXA] human gut metagenome; faeces
6615
6690
+
Ala
TGC
[ENA]
¢þ
>W141024093
AKGF01000017
Actinomycetota
Actinomyces timonensis DSM 23838 [AKGF]
22276
22203
-
Ala
TGC
[ENA]
¡û
>WENV180410830
OBUX01010135
[OBUX] human gut metagenome; faeces
225
150
-
Ala
TGC
[ENA]
¢þ
>WENV180420945
OBVP01000561
[OBVP] human gut metagenome; faeces
5198
5273
+
Ala
TGC
[ENA]
¢þ
>WENV180428050
OBWB01003606
[OBWB] human gut metagenome; faeces
765
840
+
Ala
TGC
[ENA]
¢þ
>WENV180691327
OCZS010101521
[OCZS] soil metagenome; soil
672
745
+
Ala
TGC
[ENA]
¢þ
>WENV180717695
ODGE01000718
[ODGE] human metagenome; G_DNA_Buccal mucosa
5007
5082
+
Ala
TGC
[ENA]
¢þ
>WENV180725788
ODGS01002381
[ODGS] human metagenome; G_DNA_Attached/Keratinized gingiva
3758
3683
-
Ala
TGC
[ENA]
¢þ
>WENV180731581
ODGW01002746
[ODGW] human metagenome; G_DNA_Supragingival plaque
3528
3601
+
Ala
TGC
[ENA]
¢þ
>WENV180732870
ODGY01006372
[ODGY] human metagenome; G_DNA_Supragingival plaque
1819
1894
+
Ala
TGC
[ENA]
¢þ
>WENV180739068
ODHD01004215
[ODHD] human metagenome; G_DNA_Supragingival plaque
859
934
+
Ala
TGC
[ENA]
¢þ
>WENV180740850
ODHF01006521
[ODHF] human metagenome; G_DNA_Buccal mucosa
137
212
+
Ala
TGC
[ENA]
¢þ
>WENV180750962
ODHS01014737
[ODHS] human metagenome; G_DNA_Supragingival plaque
830
904
+
Ala
TGC
[ENA]
¢þ
>WENV180755016
ODHU01007973
[ODHU] human metagenome; G_DNA_Supragingival plaque
831
906
+
Ala
TGC
[ENA]
¢þ
>WENV180764889
ODIB01003684
[ODIB] human metagenome; G_DNA_Supragingival plaque
2127
2052
-
Ala
TGC
[ENA]
¢þ
>WENV180766048
ODID01024173
[ODID] human metagenome; G_DNA_Attached/Keratinized gingiva
337
262
-
Ala
TGC
[ENA]
¢þ
>WENV180777569
ODIL01018958
[ODIL] human metagenome; G_DNA_Supragingival plaque
255
330
+
Ala
TGC
[ENA]
¢þ
>WENV180781875
ODIP01006775
[ODIP] human metagenome; G_DNA_Supragingival plaque
1856
1781
-
Ala
TGC
[ENA]
¢þ
>WENV180788219
ODIS01039553
[ODIS] human metagenome; G_DNA_Supragingival plaque
842
917
+
Ala
TGC
[ENA]
¢þ
>WENV180797558
ODJB01076557
[ODJB] human metagenome; G_DNA_Supragingival plaque
525
600
+
Ala
TGC
[ENA]
¢þ
>WENV180800935
ODJD01003229
[ODJD] human metagenome; G_DNA_Supragingival plaque
2698
2623
-
Ala
TGC
[ENA]
¢þ
>WENV180823221
ODJW01009316
[ODJW] human metagenome; G_DNA_Supragingival plaque
994
919
-
Ala
TGC
[ENA]
¢þ
>WENV180824743
ODJX01039485
[ODJX] human metagenome; G_DNA_Supragingival plaque
255
328
+
Ala
TGC
[ENA]
¢þ
>WENV180833039
ODKC01012167
[ODKC] human metagenome; G_DNA_Supragingival plaque
842
917
+
Ala
TGC
[ENA]
¢þ
>WENV180841703
ODKK01002050
[ODKK] human metagenome; G_DNA_Buccal mucosa
2546
2621
+
Ala
TGC
[ENA]
¢þ
>WENV180842121
ODKM01000198
[ODKM] human metagenome; G_DNA_Buccal mucosa
3543
3468
-
Ala
TGC
[ENA]
¢þ
>WENV180843383
ODKN01002407
[ODKN] human metagenome; G_DNA_Supragingival plaque
6526
6601
+
Ala
TGC
[ENA]
¢þ
>WENV180844921
ODKP01027888
[ODKP] human metagenome; G_DNA_Anterior nares
67
142
+
Ala
TGC
[ENA]
¢þ
>WENV180847139
ODKT01044890
[ODKT] human metagenome; G_DNA_Supragingival plaque
77
2
-
Ala
TGC
[ENA]
¢þ
>WENV180857035
ODLA01001014
[ODLA] human metagenome; G_DNA_Buccal mucosa
3294
3369
+
Ala
TGC
[ENA]
¢þ
>WENV180859408
ODLD01000625
[ODLD] human metagenome; G_DNA_Supragingival plaque
7672
7597
-
Ala
TGC
[ENA]
¢þ
>WENV180859806
ODLD01004812
[ODLD] human metagenome; G_DNA_Supragingival plaque
2294
2369
+
Ala
TGC
[ENA]
¢þ
>WENV180881478
ODMA01000873
[ODMA] human metagenome; G_DNA_Supragingival plaque
622
547
-
Ala
TGC
[ENA]
¢þ
>WENV180881908
ODMB01000645
[ODMB] human metagenome; G_DNA_Buccal mucosa
79
4
-
Ala
TGC
[ENA]
¢þ
>WENV180887472
ODMI01003382
[ODMI] human metagenome; G_DNA_Buccal mucosa
931
856
-
Ala
TGC
[ENA]
¢þ
>WENV180888863
ODMN01004844
[ODMN] human metagenome; G_DNA_Supragingival plaque
77
2
-
Ala
TGC
[ENA]
¢þ
>WENV180891676
ODMQ01004636
[ODMQ] human metagenome; G_DNA_Supragingival plaque
664
589
-
Ala
TGC
[ENA]
¢þ
>WENV180914905
ODSZ01063818
[ODSZ] human metagenome; G_DNA_Buccal mucosa
120
45
-
Ala
TGC
[ENA]
¢þ
>WENV180923288
ODTJ01101276
[ODTJ] human metagenome; G_DNA_Supragingival plaque
78
3
-
Ala
TGC
[ENA]
¢þ
>WENV180924079
ODTK01001018
[ODTK] human metagenome; G_DNA_Supragingival plaque
859
934
+
Ala
TGC
[ENA]
¢þ
>WENV180928568
ODTM01089644
[ODTM] human metagenome; G_DNA_Supragingival plaque
304
379
+
Ala
TGC
[ENA]
¢þ
>WENV180930363
ODTO01011353
[ODTO] human metagenome; G_DNA_Buccal mucosa
61
136
+
Ala
TGC
[ENA]
¢þ
>WENV180933847
ODTR01003796
[ODTR] human metagenome; G_DNA_Supragingival plaque
644
718
+
Ala
TGC
[ENA]
¢þ
>WENV180934995
ODTS01018394
[ODTS] human metagenome; G_DNA_Subgingival plaque
848
922
+
Ala
TGC
[ENA]
¢þ
>WENV180937221
ODTV01030994
[ODTV] human metagenome; G_DNA_Buccal mucosa
63
138
+
Ala
TGC
[ENA]
¢þ
>WENV180938404
ODTX01001827
[ODTX] human metagenome; G_DNA_Supragingival plaque
6381
6454
+
Ala
TGC
[ENA]
¢þ
>WENV180939039
ODTX01013359
[ODTX] human metagenome; G_DNA_Supragingival plaque
1796
1870
+
Ala
TGC
[ENA]
¢þ
>WENV180939075
ODTX01014265
[ODTX] human metagenome; G_DNA_Supragingival plaque
1627
1552
-
Ala
TGC
[ENA]
¢þ
>WENV180944514
ODUC01020521
[ODUC] human metagenome; G_DNA_Supragingival plaque
2369
2294
-
Ala
TGC
[ENA]
¢þ
>WENV180945434
ODUC01152884
[ODUC] human metagenome; G_DNA_Supragingival plaque
77
2
-
Ala
TGC
[ENA]
¢þ
>WENV180958400
ODUL01003997
[ODUL] human metagenome; G_DNA_Supragingival plaque
1157
1232
+
Ala
TGC
[ENA]
¢þ
>WENV180958480
ODUL01006122
[ODUL] human metagenome; G_DNA_Supragingival plaque
1596
1523
-
Ala
TGC
[ENA]
¢þ
>WENV180964470
ODUO01003131
[ODUO] human metagenome; G_DNA_Supragingival plaque
3113
3039
-
Ala
TGC
[ENA]
¢þ
>WENV180964526
ODUO01004073
[ODUO] human metagenome; G_DNA_Supragingival plaque
842
917
+
Ala
TGC
[ENA]
¢þ
>WENV180966441
ODUQ01000127
[ODUQ] human metagenome; G_DNA_Buccal mucosa
10233
10308
+
Ala
TGC
[ENA]
¢þ
>WENV180974001
ODUW01040676
[ODUW] human metagenome; G_DNA_Supragingival plaque
524
449
-
Ala
TGC
[ENA]
¢þ
>WENV180975546
ODUY01009928
[ODUY] human metagenome; G_DNA_Supragingival plaque
843
918
+
Ala
TGC
[ENA]
¢þ
>WENV180980193
ODVD01014737
[ODVD] human metagenome; G_DNA_Buccal mucosa
61
136
+
Ala
TGC
[ENA]
¢þ
>WENV180981156
ODVE01008278
[ODVE] human metagenome; G_DNA_Supragingival plaque
1025
950
-
Ala
TGC
[ENA]
¢þ
>WENV180981224
ODVE01011143
[ODVE] human metagenome; G_DNA_Supragingival plaque
1732
1659
-
Ala
TGC
[ENA]
¢þ
>WENV180981447
ODVE01022708
[ODVE] human metagenome; G_DNA_Supragingival plaque
74
1
-
Ala
TGC
[ENA]
¢þ
>WENV180981601
ODVE01034998
[ODVE] human metagenome; G_DNA_Supragingival plaque
930
855
-
Ala
TGC
[ENA]
¢þ
>WENV180983527
ODVF01017623
[ODVF] human metagenome; G_DNA_Supragingival plaque
250
325
+
Ala
TGC
[ENA]
¢þ
>WENV180986997
ODVK01003078
[ODVK] human metagenome; G_DNA_Supragingival plaque
3648
3723
+
Ala
TGC
[ENA]
¢þ
>WENV181008343
ODWE01004138
[ODWE] human metagenome; G_DNA_Supragingival plaque
6086
6013
-
Ala
TGC
[ENA]
¢þ
>WENV181008755
ODWE01012923
[ODWE] human metagenome; G_DNA_Supragingival plaque
839
914
+
Ala
TGC
[ENA]
¢þ
>WENV181012593
ODWK01001901
[ODWK] human metagenome; G_DNA_Supragingival plaque
2194
2269
+
Ala
TGC
[ENA]
¢þ
>WENV181019459
ODWU01003498
[ODWU] human metagenome; G_DNA_Supragingival plaque
2341
2416
+
Ala
TGC
[ENA]
¢þ
>WENV181025613
ODXB01007875
[ODXB] human metagenome; G_DNA_Buccal mucosa
985
1060
+
Ala
TGC
[ENA]
¢þ
>WENV181027655
ODXD01022105
[ODXD] human metagenome; G_DNA_Buccal mucosa
464
539
+
Ala
TGC
[ENA]
¢þ
>WENV181042930
ODXU01018256
[ODXU] human metagenome; G_DNA_Buccal mucosa
660
735
+
Ala
TGC
[ENA]
¢þ
>WENV181049901
ODYD01003126
[ODYD] human metagenome; G_DNA_Supragingival plaque
2782
2709
-
Ala
TGC
[ENA]
¢þ
>WENV181050506
ODYD01022790
[ODYD] human metagenome; G_DNA_Supragingival plaque
859
934
+
Ala
TGC
[ENA]
¢þ
>WENV181063915
ODYP01005264
[ODYP] human metagenome; G_DNA_Supragingival plaque
3235
3160
-
Ala
TGC
[ENA]
¢þ
>WENV181065305
ODYT01000603
[ODYT] human metagenome; G_DNA_Buccal mucosa
496
421
-
Ala
TGC
[ENA]
¢þ
>WENV181065822
ODYV01002154
[ODYV] human metagenome; G_DNA_Buccal mucosa
197
122
-
Ala
TGC
[ENA]
¢þ
>WENV181066996
ODZI01004567
[ODZI] human metagenome; G_DNA_Supragingival plaque
1787
1862
+
Ala
TGC
[ENA]
¢þ
>WENV181070397
OEAE01001197
[OEAE] human metagenome; G_DNA_Supragingival plaque
6369
6444
+
Ala
TGC
[ENA]
¢þ
>WENV181071522
OEAM01000269
[OEAM] human metagenome; G_DNA_Supragingival plaque
158
83
-
Ala
TGC
[ENA]
¢þ
>WENV181077723
OEAP01117762
[OEAP] human metagenome; G_DNA_Supragingival plaque
93
18
-
Ala
TGC
[ENA]
¢þ
>WENV181080659
OEAS01066277
[OEAS] human metagenome; G_DNA_Supragingival plaque
909
835
-
Ala
TGC
[ENA]
¢þ
>WENV181082308
OEAT01000376
[OEAT] human metagenome; G_DNA_Supragingival plaque
6554
6629
+
Ala
TGC
[ENA]
¢þ
>WENV181101077
OECM01001926
[OECM] human metagenome; G_DNA_Buccal mucosa
1055
1130
+
Ala
TGC
[ENA]
¢þ
>WENV181107464
OEEI01008212
[OEEI] human metagenome; G_DNA_Supragingival plaque
2680
2755
+
Ala
TGC
[ENA]
¢þ
>WENV181120112
OEFJ01005103
[OEFJ] human metagenome; G_DNA_Attached/Keratinized gingiva
1185
1260
+
Ala
TGC
[ENA]
¢þ
>WENV181122824
OEFN01003224
[OEFN] human metagenome; G_DNA_Buccal mucosa
518
443
-
Ala
TGC
[ENA]
¢þ
>WENV181123871
OEFQ01001765
[OEFQ] human metagenome; G_DNA_Supragingival plaque
652
577
-
Ala
TGC
[ENA]
¢þ
>WENV181136198
OEGI01001385
[OEGI] human metagenome; G_DNA_Supragingival plaque
595
520
-
Ala
TGC
[ENA]
¢þ
>WENV181137682
OEGJ01013299
[OEGJ] human metagenome; G_DNA_Supragingival plaque
1230
1155
-
Ala
TGC
[ENA]
¢þ
>WENV181143561
OEHM01002066
[OEHM] human metagenome; G_DNA_Supragingival plaque
3619
3694
+
Ala
TGC
[ENA]
¢þ
>WENV181146563
OEHQ01009882
[OEHQ] human metagenome; G_DNA_Supragingival plaque
859
932
+
Ala
TGC
[ENA]
¢þ
>WENV181152678
OEIA01003894
[OEIA] human metagenome; G_DNA_Supragingival plaque
4020
4095
+
Ala
TGC
[ENA]
¢þ
>WENV181156409
OEIE01014426
[OEIE] human metagenome; G_DNA_Supragingival plaque
253
328
+
Ala
TGC
[ENA]
¢þ
>WENV181158631
OEIH01004390
[OEIH] human metagenome; G_DNA_Supragingival plaque
74
1
-
Ala
TGC
[ENA]
¢þ
>WENV181160093
OEIK01001918
[OEIK] human metagenome; G_DNA_Supragingival plaque
8081
8007
-
Ala
TGC
[ENA]
¢þ
>WENV181179820
OEJT01019699
[OEJT] human metagenome; G_DNA_Supragingival plaque
859
934
+
Ala
TGC
[ENA]
¢þ
>WENV181180774
OEJU01001000
[OEJU] human metagenome; G_DNA_Supragingival plaque
12627
12702
+
Ala
TGC
[ENA]
¢þ
>WENV181187240
OENY01000516
[OENY] human gut metagenome; human gut
2578
2503
-
Ala
TGC
[ENA]
¢þ
>W141143192
AWSD01000029
Actinomycetota
Actinomyces johnsonii F0510 [AWSD]
2757
2682
-
Ala
TGC
[ENA]
¡û
>W141143247
AWSE01000031
Actinomycetota
Actinomyces johnsonii F0542 [AWSE]
15535
15460
-
Ala
TGC
[ENA]
¡û
>W141206194
AZLV01000849
Actinomycetota
Actinomyces urogenitalis DORA_12 [AZLV]
2876
2951
+
Ala
TGC
[ENA]
¡û
>WENV182641105
OJLE01006068
[OJLE] metagenome; surface
741
666
-
Ala
TGC
[ENA]
¢þ
>WENV182671697
OJNM01001284
[OJNM] metagenome; surface
2144
2069
-
Ala
TGC
[ENA]
¢þ
>WENV182815034
OJYO01000413
[OJYO] human gut metagenome; human gut
6197
6272
+
Ala
TGC
[ENA]
¢þ
>WENV182815330
OJYQ01001736
[OJYQ] human gut metagenome; human gut
811
736
-
Ala
TGC
[ENA]
¢þ
>WENV182822918
OKBP01000137
[OKBP] human gut metagenome; human gut
6162
6237
+
Ala
TGC
[ENA]
¢þ
>WENV182845979
OKJI01000094
[OKJI] human gut metagenome; human gut
23338
23413
+
Ala
TGC
[ENA]
¢þ
>WENV182846390
OKJM01000004
[OKJM] human gut metagenome; human gut
16877
16952
+
Ala
TGC
[ENA]
¢þ
>WENV182854945
OKMX01000213
[OKMX] human gut metagenome; human gut
5768
5843
+
Ala
TGC
[ENA]
¢þ
>WENV182857475
OKNX01001595
[OKNX] human gut metagenome; human gut
1283
1208
-
Ala
TGC
[ENA]
¢þ
>WENV182961109
OKWK01000173
[OKWK] human gut metagenome; stool
43165
43240
+
Ala
TGC
[ENA]
¢þ
>WENV183132502
OLOB01002715
[OLOB] human gut metagenome; faeces
4774
4699
-
Ala
TGC
[ENA]
¢þ
>WENV183508133
OMHB01001960
[OMHB] human oral metagenome; human oral
884
809
-
Ala
TGC
[ENA]
¢þ
>WENV183508506
OMHD01008594
[OMHD] human oral metagenome; human oral
467
392
-
Ala
TGC
[ENA]
¢þ
>WENV183509027
OMHG01002636
[OMHG] human oral metagenome; human oral
99
174
+
Ala
TGC
[ENA]
¢þ
>WENV183509245
OMHH01001879
[OMHH] human oral metagenome; human oral
966
1039
+
Ala
TGC
[ENA]
¢þ
>WENV183509574
OMHI01014533
[OMHI] human oral metagenome; human oral
83
158
+
Ala
TGC
[ENA]
¢þ
>WENV183509721
OMHJ01007044
[OMHJ] human oral metagenome; human oral
202
128
-
Ala
TGC
[ENA]
¢þ
>WENV183510123
OMHM01000115
[OMHM] human oral metagenome; human oral
1438
1363
-
Ala
TGC
[ENA]
¢þ
>WENV183510449
OMHO01002433
[OMHO] human oral metagenome; human oral
63
138
+
Ala
TGC
[ENA]
¢þ
>WENV183510702
OMHQ01003626
[OMHQ] human oral metagenome; human oral
918
843
-
Ala
TGC
[ENA]
¢þ
>WENV183511187
OMIA01006295
[OMIA] human oral metagenome; human oral
98
173
+
Ala
TGC
[ENA]
¢þ
>WENV183511228
OMIB01001063
[OMIB] human oral metagenome; human oral
1623
1548
-
Ala
TGC
[ENA]
¢þ
>WENV183712660
PDWI01108915
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
182
256
+
Ala
TGC
[ENA]
¢þ
>WENV183714022
PDWI01164056
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
661
588
-
Ala
TGC
[ENA]
¢þ
>WENV183718733
PDWJ01006217
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
270
343
+
Ala
TGC
[ENA]
¢þ
>WENV183719788
PDWJ01020349
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
1841
1767
-
Ala
TGC
[ENA]
¢þ
>WENV170009554
APMI01000720
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
14
89
+
Ala
TGC
[ENA]
¢þ
>C181003315
AP017894
Actinomycetota
Actinomyces naeslundii [AP017894]
928747
928672
-
Ala
TGC
-
¡û
>C181003367
AP017896
Actinomycetota
Actinomyces sp. Chiba101 [AP017896]
8990
9063
+
Ala
TGC
-
¡û
>C181160782
CP027862
Actinomycetota
Actinomyces sp. Z16 [CP027862]
11543
11616
+
Ala
TGC
-
¡û
>C191030311
CP025227
Actinomycetota
Actinomyces wuliandei 299 [CP025227]
11395
11468
+
Ala
TGC
-
¡û
>C191030360
CP025228
Actinomycetota
Actinomyces qiguomingii 410 [CP025228]
14093
14166
+
Ala
TGC
-
¡û
>C191164705
CP039292
Actinomycetota
Actinomyces procaprae dk561 [CP039292]
11507
11580
+
Ala
TGC
-
¡û
>C191173721
CP040005
Actinomycetota
Actinomyces sp. oral taxon 171 str. F0337 [CP040005]
11170
11245
+
Ala
TGC
-
¡û
>C191183888
CP040899
Actinomycetota
Georgenia wutianyii Z294 [CP040899]
11795
11870
+
Ala
TGC
-
¡û
>C191208275
LR134350
Actinomycetota
Actinomyces howellii NCTC11636 [LR134350]
1993585
1993510
-
Ala
TGC
-
¡û
>C191208627
LR134357
Actinomycetota
Actinomyces israelii NCTC12972 [LR134357]
2234201
2234276
+
Ala
TGC
-
¡û
>C191208927
LR134363
Actinomycetota
Actinomyces slackii NCTC11923 [LR134363]
673459
673532
+
Ala
TGC
-
¡û
>C191211578
LR134477
Actinomycetota
Actinomyces viscosus NCTC10951 [LR134477]
2674055
2673982
-
Ala
TGC
-
¡û
>W141727710
JNFL01000062
Actinomycetota
Georgenia sp. SUBG003 [JNFL]
834
909
+
Ala
TGC
[ENA]
¡û
>W09121431
ACFH01000057
Actinomycetota
Actinomyces urogenitalis DSM 15434 [ACFH]
8649
8574
-
Ala
TGC
[ENA]
¡û
>W1910281476
FQTT01000015
Actinomycetota
Actinomyces glycerinitolerans [FQTT]
102816
102889
+
Ala
TGC
[ENA]
¡û
>W1910339885
FTLI01000070
Actinomycetota
Actinomyces provencensis SN12 [FTLI]
24695
24770
+
Ala
TGC
[ENA]
¡û
>W1911541384
OOHN01000008
Actinomycetota
Actinomyces sp. Marseille-P3109 [OOHN]
2590961
2590888
-
Ala
TGC
[ENA]
¡û
>W1911798525
QYRR01000002
Actinomycetota
Actinomyces sp. 2119 [QYRR]
140602
140528
-
Ala
TGC
[ENA]
¡û
>W1810058289
PDJI01000004
Actinomycetota
Georgenia soli DSM 21838 [PDJI]
2186692
2186618
-
Ala
TGC
[ENA]
¡û
>W1810186625
PKHA01000010
Actinomycetota
Actinomyces urogenitalis UMB0319 [PKHA]
49749
49824
+
Ala
TGC
[ENA]
¡û
>W1810191209
PKKK01000005
Actinomycetota
Actinomyces naeslundii UMB0731 [PKKK]
166355
166280
-
Ala
TGC
[ENA]
¡û
>W1810191253
PKKL01000004
Actinomycetota
Actinomyces oris UMB0183 [PKKL]
275226
275301
+
Ala
TGC
[ENA]
¡û
>W1810191399
PKKP01000001
Actinomycetota
Actinomyces naeslundii UMB0181 [PKKP]
349974
350049
+
Ala
TGC
[ENA]
¡û
>W1810238738
PPPL01000083
Actinomycetota
Actinomyces qiguomingii 553 [PPPL]
60364
60437
+
Ala
TGC
[ENA]
¡û
>W1810594923
QGDN01000001
Actinomycetota
Branchiibius hedensis DSM 22951 [QGDN]
3256791
3256866
+
Ala
TGC
[ENA]
¡û
>W1810705128
QMIN01000021
Actinomycetota
Actinomyces sp. Z5 [QMIN]
19794
19721
-
Ala
TGC
[ENA]
¡û
>W1810705201
QMIO01000023
Actinomycetota
Actinomyces sp. Z3 [QMIO]
4067
3994
-
Ala
TGC
[ENA]
¡û
>W1810744378
QOUI01000003
Actinomycetota
Desertihabitans brevis 16Sb5-5 [QOUI]
136283
136210
-
Ala
TGC
[ENA]
¡û
>W10103570
ACRE01000046
Actinomycetota
Actinomyces viscosus C505 [ACRE]
62059
61984
-
Ala
TGC
[ENA]
¡û
>W1510060400
CCXH01000094
Actinomycetota
Actinomyces polynesiensis MS2 [CCXH]
13526
13453
-
Ala
TGC
[ENA]
¡û
>W10128198
BABV01000043
Actinomycetota
Actinomyces oris K20 [BABV]
14024
13949
-
Ala
TGC
[ENA]
¡û
>W11103778
ACRE01000046
Actinomycetota
Actinomyces viscosus C505 [ACRE]
62059
61984
-
Ala
TGC
[ENA]
¡û
>W1511350879
JRMT01000015
Actinomycetota
Actinomyces urogenitalis S6-C4 [JRMT]
49418
49493
+
Ala
TGC
[ENA]
¡û
>W1511350882
JRMT01000015
Actinomycetota
Actinomyces urogenitalis S6-C4 [JRMT]
15637
15562
-
Ala
TGC
[ENA]
¡û
>W1511444696
JUUL01000070
Actinomycetota
Actinomyces urogenitalis 752_PACI [JUUL]
16911
16986
+
Ala
TGC
[ENA]
¡û
>W1511476010
JWEC01000309
Actinomycetota
Xylanimonas cellulosilytica 107_XCEL [JWEC]
3492
3417
-
Ala
TGC
[ENA]
¡û
>W11133236
AECW01000270
Actinomycetota
Actinomyces sp. oral taxon 171 oral taxon 171 str. F0337 [AECW]
3543
3468
-
Ala
TGC
[ENA]
¡û
>W11156685
AFBL01000016
Actinomycetota
Actinomyces sp. oral taxon 170 oral taxon 170 str. F0386 [AFBL]
13501
13426
-
Ala
TGC
[ENA]
¡û
>W11174497
AFUR01000005
Actinomycetota
Actinomyces sp. oral taxon 175 oral taxon 175 str. F0384 [AFUR]
129799
129874
+
Ala
TGC
[ENA]
¡û
>W11184398
BABV01000043
Actinomycetota
Actinomyces oris K20 [BABV]
14024
13949
-
Ala
TGC
[ENA]
¡û
>C161068949
CP014228
Actinomycetota
Actinomyces radicidentis CCUG 36733 [CP014228]
1107330
1107255
-
Ala
TGC
[Ensembl]
¡û
>C161069150
CP014232
Actinomycetota
Actinomyces oris T14V [CP014232]
1176860
1176785
-
Ala
TGC
[Ensembl]
¡û
>W1610051537
BBGY01000365
Actinomycetota
Cellulomonas composti JCM 14898 [BBGY]
310
235
-
Ala
TGC
[ENA]
¡û
>W121000087
ACTB01000051
Actinomycetota
Actinomyces sp. oral taxon 849 oral taxon 849 str. F0330 [ACTB]
6253
6328
+
Ala
TGC
[ENA]
¡û
>W121111467
ALJK01000149
Actinomycetota
Actinomyces naeslundii str. Howell 279 [ALJK]
97228
97153
-
Ala
TGC
[ENA]
¡û
>W1610949108
LVCF01000037
Actinomycetota
Branchiibius sp. NY16-3462-2 [LVCF]
5941
5866
-
Ala
TGC
[ENA]
¡û
>W1611058976
MAUB01000471
Actinomycetota
Actinomyces oris [MAUB]
6309
6384
+
Ala
TGC
[ENA]
¡û
>W1710047915
BBGY01000365
Actinomycetota
Cellulomonas composti JCM 14898 [BBGY]
310
235
-
Ala
TGC
[ENA]
¡û
>W1710082822
BDIO01000006
Actinomycetota
Actinomyces denticolens [BDIO]
1313087
1313014
-
Ala
TGC
[ENA]
¡û
>W1710523249
FNHU01000015
Actinomycetota
Actinomyces ruminicola [FNHU]
66601
66528
-
Ala
TGC
[ENA]
¡û
>W1710524128
FNIM01000002
Actinomycetota
Actinomyces ruminicola [FNIM]
59728
59655
-
Ala
TGC
[ENA]
¡û
>W1710537590
FNTX01000002
Actinomycetota
Ruania alba album [FNTX]
803646
803719
+
Ala
TGC
[ENA]
¡û
>W1710587387
FQYL01000006
Actinomycetota
Actinomyces denticolens [FQYL]
54771
54844
+
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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