tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.458878 (109 seq.)
>W1710995954 LQAS01000010 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [LQAS] 163183 163108 - Glu TTC [ENA] ¡û
>W1710995957 LQAS01000010 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [LQAS] 162781 162706 - Glu TTC [ENA] ¡û
>W1711710506 MSZN01000013 Betaproteobacteria Alcaligenes faecalis [MSZN] 125748 125673 - Glu TTC [ENA] ¡û
>W1711710509 MSZN01000013 Betaproteobacteria Alcaligenes faecalis [MSZN] 125341 125266 - Glu TTC [ENA] ¡û
>W1711710562 MSZO01000010 Betaproteobacteria Alcaligenes faecalis [MSZO] 10735 10810 + Glu TTC [ENA] ¡û
>W1711710565 MSZO01000010 Betaproteobacteria Alcaligenes faecalis [MSZO] 11142 11217 + Glu TTC [ENA] ¡û
>W1711710597 MSZP01000004 Betaproteobacteria Alcaligenes faecalis [MSZP] 180759 180834 + Glu TTC [ENA] ¡û
>W1711710600 MSZP01000004 Betaproteobacteria Alcaligenes faecalis [MSZP] 181157 181232 + Glu TTC [ENA] ¡û
>W1711710645 MSZQ01000003 Betaproteobacteria Alcaligenes faecalis [MSZQ] 182386 182311 - Glu TTC [ENA] ¡û
>W1711710648 MSZQ01000003 Betaproteobacteria Alcaligenes faecalis [MSZQ] 181988 181913 - Glu TTC [ENA] ¡û
>W1711710700 MSZR01000005 Betaproteobacteria Alcaligenes faecalis [MSZR] 182371 182296 - Glu TTC [ENA] ¡û
>W1711710703 MSZR01000005 Betaproteobacteria Alcaligenes faecalis [MSZR] 181973 181898 - Glu TTC [ENA] ¡û
>W1711711890 MTBI01000002 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [MTBI] 537470 537545 + Glu TTC [ENA] ¡û
>W1711711893 MTBI01000002 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [MTBI] 537869 537944 + Glu TTC [ENA] ¡û
>C171115541 CP021079 Betaproteobacteria Alcaligenes faecalis P156 [CP021079] 750907 750832 - Glu TTC - ¡û
>C171115544 CP021079 Betaproteobacteria Alcaligenes faecalis P156 [CP021079] 750510 750435 - Glu TTC - ¡û
>W131051790 AMXV01000060 Betaproteobacteria Alcaligenes sp. HPC1271 [AMXV] 17438 17513 + Glu TTC [ENA] ¡û
>W131051793 AMXV01000060 Betaproteobacteria Alcaligenes sp. HPC1271 [AMXV] 17834 17909 + Glu TTC [ENA] ¡û
>W131052684 AMZF01000027 Betaproteobacteria Pusillimonas noertemannii BS8 [AMZF] 27864 27789 - Glu TTC [ENA] ¡û
>W141104435 AVOG02000056 Betaproteobacteria Alcaligenes sp. EGD-AK7 [AVOG] 29865 29790 - Glu TTC [ENA] ¡û
>W141104438 AVOG02000056 Betaproteobacteria Alcaligenes sp. EGD-AK7 [AVOG] 29469 29394 - Glu TTC [ENA] ¡û
>W141194197 AYSV01000094 Betaproteobacteria Pelistega indica HM-7 [AYSV] 10476 10401 - Glu TTC [ENA] ¡û
>W141194199 AYSV01000094 Betaproteobacteria Pelistega indica HM-7 [AYSV] 10272 10197 - Glu TTC [ENA] ¡û
>W141200394 AYXT01000012 Betaproteobacteria Advenella kashmirensis W13003 [AYXT] 227932 228007 + Glu TTC [ENA] ¡û
>W141237713 BBJQ01000003 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ] 253041 252966 - Glu TTC [ENA] ¡û
>W141237716 BBJQ01000003 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NBRC 13111 [BBJQ] 252642 252567 - Glu TTC [ENA] ¡û
>WENV183712508 PDWI01102437 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2032 2107 + Glu TTC [ENA] ¢þ
>WENV183727851 PJTP01001297 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 1960 1885 - Glu TTC [ENA] ¢þ
>WENV183733759 PJTY01023056 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 343 418 + Glu TTC [ENA] ¢þ
>WENV183738207 PJUD01119665 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 425 350 - Glu TTC [ENA] ¢þ
>WENV183739180 PJUE01002699 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 77 2 - Glu TTC [ENA] ¢þ
>WENV183740215 PJUF01000728 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 12402 12327 - Glu TTC [ENA] ¢þ
>WENV183741161 PJUF01048637 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 414 339 - Glu TTC [ENA] ¢þ
>WENV170130647 CENR01019723 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 134 209 + Glu TTC [ENA] ¢þ
>WENV170136684 CENV01060854 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 87144 87069 - Glu TTC [ENA] ¢þ
>WENV170645964 JQGF01002352 [JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each 811 736 - Glu TTC [ENA] ¢þ
>WENV170645967 JQGF01002352 [JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each 409 334 - Glu TTC [ENA] ¢þ
>WENV170645990 JQGF01003910 [JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each 412 337 - Glu TTC [ENA] ¢þ
>WENV170655663 JTFN01055764 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 257 332 + Glu TTC [ENA] ¢þ
>WENV170655937 JTFN01098408 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 11 86 + Glu TTC [ENA] ¢þ
>WENV170655940 JTFN01098408 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 413 488 + Glu TTC [ENA] ¢þ
>WENV170655972 JTFN01105154 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 325 400 + Glu TTC [ENA] ¢þ
>WENV170656495 JTFO01019457 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 89 14 - Glu TTC [ENA] ¢þ
>WENV170656584 JTFO01026573 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 399 324 - Glu TTC [ENA] ¢þ
>WENV170657153 JTFO01092386 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 325 400 + Glu TTC [ENA] ¢þ
>WENV170657322 JTFO01124917 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 265 340 + Glu TTC [ENA] ¢þ
>WENV170687469 LFRM01194060 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 834 759 - Glu TTC [ENA] ¢þ
>WENV170705693 LNAP01000132 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 44302 44227 - Glu TTC [ENA] ¢þ
>WENV170716908 LSQX01016305 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 75311 75236 - Glu TTC [ENA] ¢þ
>WENV170965751 MTEV01001991 [MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine 1714 1639 - Glu TTC [ENA] ¢þ
>C181049084 CP021060 Betaproteobacteria Taylorella equigenitalis 92-0972 [CP021060] 1415634 1415709 + Glu TTC - ¡û
>C181049949 CP021199 Betaproteobacteria Taylorella equigenitalis 89-0490 [CP021199] 1398814 1398889 + Glu TTC - ¡û
>C181049986 CP021200 Betaproteobacteria Taylorella equigenitalis 79-1587 [CP021200] 1481764 1481839 + Glu TTC - ¡û
>C181050023 CP021201 Betaproteobacteria Taylorella equigenitalis 09-0932 [CP021201] 1382000 1382075 + Glu TTC - ¡û
>C181050105 CP021246 Betaproteobacteria Taylorella equigenitalis 98-0554 [CP021246] 1435733 1435808 + Glu TTC - ¡û
>C181053260 CP021641 Betaproteobacteria Alcaligenes faecalis JQ135 [CP021641] 685827 685752 - Glu TTC - ¡û
>C181053263 CP021641 Betaproteobacteria Alcaligenes faecalis JQ135 [CP021641] 685425 685350 - Glu TTC - ¡û
>C181088618 CP023667 Betaproteobacteria Alcaligenes faecalis DSM 30030 [CP023667] 458486 458411 - Glu TTC - ¡û
>C181088621 CP023667 Betaproteobacteria Alcaligenes faecalis DSM 30030 [CP023667] 458087 458012 - Glu TTC - ¡û
>C181121023 CP025628 Betaproteobacteria Candidatus Kinetoplastibacterium sorsogonicusi MF-08 [CP025628] 110813 110738 - Glu TTC - ¡û
>C181169399 CP028901 Betaproteobacteria Orrella marina HZ20 [CP028901] 1849428 1849503 + Glu TTC - ¡û
>C191023162 CP022987 Betaproteobacteria Pollutimonas thiosulfatoxidans YE3 [CP022987] 169383 169308 - Glu TTC - ¡û
>C191085297 CP032153 Betaproteobacteria Alcaligenes aquatilis QD168 [CP032153] 919678 919603 - Glu TTC - ¡û
>C191085300 CP032153 Betaproteobacteria Alcaligenes aquatilis QD168 [CP032153] 919276 919201 - Glu TTC - ¡û
>C191091169 CP032521 Betaproteobacteria Alcaligenes faecalis J481 [CP032521] 3213588 3213513 - Glu TTC - ¡û
>C191091172 CP032521 Betaproteobacteria Alcaligenes faecalis J481 [CP032521] 3213186 3213111 - Glu TTC - ¡û
>C191113974 CP033861 Betaproteobacteria Alcaligenes faecalis FDAARGOS_491 [CP033861] 1733163 1733088 - Glu TTC - ¡û
>C191113977 CP033861 Betaproteobacteria Alcaligenes faecalis FDAARGOS_491 [CP033861] 1732764 1732689 - Glu TTC - ¡û
>C191149658 CP036294 Betaproteobacteria Alcaligenes faecalis AN70 [CP036294] 2527503 2527428 - Glu TTC - ¡û
>C191208072 LR134346 Betaproteobacteria Taylorella equigenitalis ATCC 35865 NCTC11184 [LR134346] 1444220 1444295 + Glu TTC - ¡û
>W141560358 JHXN01000002 Betaproteobacteria Taylorella asinigenitalis ATCC 700933 [JHXN] 29454 29379 - Glu TTC [ENA] ¡û
>W1910225805 FMSW01000010 Betaproteobacteria Pelistega sp. MC2 [FMSW] 56620 56545 - Glu TTC [ENA] ¡û
>W1910225807 FMSW01000010 Betaproteobacteria Pelistega sp. MC2 [FMSW] 56416 56341 - Glu TTC [ENA] ¡û
>W1910891671 NEXS01000003 Betaproteobacteria Advenella sp. S44 [NEXS] 743570 743645 + Glu TTC [ENA] ¡û
>W1911180887 NQOU01000001 Betaproteobacteria Neopusillimonas maritima 17-4A [NQOU] 785250 785325 + Glu TTC [ENA] ¡û
>W1911192779 NQYH01000001 Betaproteobacteria Neopusillimonas maritima L52-1-41 [NQYH] 218495 218570 + Glu TTC [ENA] ¡û
>W1810063577 PDUW01000005 Betaproteobacteria Pusillimonas caeni KCTC 42353 [PDUW] 10649 10724 + Glu TTC [ENA] ¡û
>W1810063601 PDUX01000001 Betaproteobacteria Pusillimonas noertemannii DSM 10065 [PDUX] 634958 635033 + Glu TTC [ENA] ¡û
>W1810573181 QEKO01000001 Betaproteobacteria Pusillimonas noertemannii DSM 10065 [QEKO] 832908 832833 - Glu TTC [ENA] ¡û
>W1810583890 QEXO01000002 Betaproteobacteria Alcaligenes faecalis YBY [QEXO] 537325 537400 + Glu TTC [ENA] ¡û
>W1810583893 QEXO01000002 Betaproteobacteria Alcaligenes faecalis YBY [QEXO] 537724 537799 + Glu TTC [ENA] ¡û
>W1810701967 QMFX01000002 Betaproteobacteria Taylorella equigenitalis 210217RC10635 [QMFX] 55313 55238 - Glu TTC [ENA] ¡û
>W1810721001 QNRQ01000005 Betaproteobacteria Eoetvoesiella caeni DSM 25520 [QNRQ] 219725 219800 + Glu TTC [ENA] ¡û
>W1810759274 QPJH01000002 Betaproteobacteria Pusillimonas sp. EA3 [QPJH] 485220 485295 + Glu TTC [ENA] ¡û
>C151004936 CP003915 Betaproteobacteria Advenella mimigardefordensis DPN7 [CP003915] 3229473 3229398 - Glu TTC [Ensembl] ¡û
>C151046320 CP009238 Betaproteobacteria Basilea psittacipulmonis DSM 24701 [CP009238] 1539043 1538968 - Glu TTC [Ensembl] ¡û
>W1511321027 JQCV01000004 Betaproteobacteria Alcaligenes faecalis MOR02 [JQCV] 540962 541037 + Glu TTC [ENA] ¡û
>W1511321051 JQCV01000019 Betaproteobacteria Alcaligenes faecalis MOR02 [JQCV] 321 396 + Glu TTC [ENA] ¡û
>C11118198 CP002663 Betaproteobacteria Pusillimonas sp. T7-7 [CP002663] 2217018 2217093 + Glu TTC [Ensembl] ¡û
>W1511350700 JRMO01000003 Betaproteobacteria Taylorella equigenitalis MCE529 [JRMO] 89121 89196 + Glu TTC [ENA] ¡û
>C11122606 CP002456 Betaproteobacteria Taylorella equigenitalis MCE9 [CP002456] 391923 391998 + Glu TTC [Ensembl] ¡û
>W1511537482 JZBR01000007 Betaproteobacteria Alcaligenes faecalis ZD02 [JZBR] 475584 475509 - Glu TTC [ENA] ¡û
>W1511537485 JZBR01000007 Betaproteobacteria Alcaligenes faecalis ZD02 [JZBR] 475185 475110 - Glu TTC [ENA] ¡û
>W11171214 AFQG01000070 Betaproteobacteria Advenella kashmirensis WT001 [AFQG] 7894 7819 - Glu TTC [ENA] ¡û
>C121004843 CP003059 Betaproteobacteria Taylorella asinigenitalis MCE3 [CP003059] 1398024 1398099 + Glu TTC [Ensembl] ¡û
>C121009935 CP003264 Betaproteobacteria Taylorella equigenitalis ATCC 35865 [CP003264] 1474828 1474903 + Glu TTC [Ensembl] ¡û
>C121014493 CP003555 Betaproteobacteria Advenella kashmirensis WT001 [CP003555] 1203109 1203184 + Glu TTC [Ensembl] ¡û
>C161051347 CP013119 Betaproteobacteria Alcaligenes faecalis ZD02 [CP013119] 1592918 1592993 + Glu TTC [Ensembl] ¡û
>C161051350 CP013119 Betaproteobacteria Alcaligenes faecalis ZD02 [CP013119] 1593317 1593392 + Glu TTC [Ensembl] ¡û
>W1610093549 CYTB01000001 Betaproteobacteria Alcaligenes faecalis ATCC8750 [CYTB] 253136 253061 - Glu TTC [ENA] ¡û
>W121091218 AKMR01000013 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR] 234338 234413 + Glu TTC [ENA] ¡û
>W121091233 AKMR01000034 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR] 630 555 - Glu TTC [ENA] ¡û
>W121091236 AKMR01000034 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NCIB 8687 [AKMR] 228 153 - Glu TTC [ENA] ¡û
>W1610850611 LQAS01000010 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [LQAS] 163183 163108 - Glu TTC [ENA] ¡û
>W1610850614 LQAS01000010 Betaproteobacteria Alcaligenes phenolicus subsp. phenolicus [LQAS] 162781 162706 - Glu TTC [ENA] ¡û
>W1610921501 LSUO01000003 Betaproteobacteria Alcaligenes faecalis P156 [LSUO] 193524 193599 + Glu TTC [ENA] ¡û
>W1710004111 AFWK01000021 Betaproteobacteria Basilea psittacipulmonis DSM 24701 [AFWK] 45038 44963 - Glu TTC [ENA] ¡û
>W1710082526 BDHG01000002 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG] 253181 253106 - Glu TTC [ENA] ¡û
>W1710082529 BDHG01000002 Betaproteobacteria Alcaligenes faecalis subsp. faecalis NBRC 13111 [BDHG] 252782 252707 - Glu TTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK