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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.458941 (255 seq.)
>W131144853
AQFS01000046
Bacillota
Ligilactobacillus murinus ASF361 [AQFS]
3302
3376
+
Lys
TTT
[ENA]
¡û
>W1711229982
LXZG01000094
Bacillota
Ligilactobacillus salivarius [LXZG]
179
253
+
Lys
TTT
[ENA]
¡û
>W1711345206
MCNR01000005
Bacillota
Ligilactobacillus animalis [MCNR]
682
756
+
Lys
TTT
[ENA]
¡û
>W1711345235
MCNR01000008
Bacillota
Ligilactobacillus animalis [MCNR]
469
543
+
Lys
TTT
[ENA]
¡û
>W1711345258
MCNR01000024
Bacillota
Ligilactobacillus animalis [MCNR]
77
3
-
Lys
TTT
[ENA]
¡û
>W1711433894
MIMN01000084
Bacillota
Limosilactobacillus reuteri [MIMN]
889
963
+
Lys
TTT
[ENA]
¡û
>W1711632485
MPSN01000001
Bacillota
Ligilactobacillus murinus [MPSN]
310791
310717
-
Lys
TTT
[ENA]
¡û
>W1711632511
MPSN01000001
Bacillota
Ligilactobacillus murinus [MPSN]
5449
5375
-
Lys
TTT
[ENA]
¡û
>W1711683642
MRYO01000009
Bacillota
Ligilactobacillus ruminis [MRYO]
189
263
+
Lys
TTT
[ENA]
¡û
>W1711683679
MRYO01000082
Bacillota
Ligilactobacillus ruminis [MRYO]
78
153
+
Lys
TTT
[ENA]
¡û
>W1711683695
MRYP01000006
Bacillota
Ligilactobacillus ruminis [MRYP]
86508
86433
-
Lys
TTT
[ENA]
¡û
>W1711683739
MRYP01000035
Bacillota
Ligilactobacillus ruminis [MRYP]
17675
17601
-
Lys
TTT
[ENA]
¡û
>W1711683756
MRYQ01000006
Bacillota
Ligilactobacillus ruminis [MRYQ]
91445
91370
-
Lys
TTT
[ENA]
¡û
>W1711683791
MRYQ01000028
Bacillota
Ligilactobacillus ruminis [MRYQ]
17720
17646
-
Lys
TTT
[ENA]
¡û
>W1711943439
NBDX01000004
Bacillota
Ligilactobacillus salivarius [NBDX]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711943481
NBDY01000005
Bacillota
Ligilactobacillus salivarius [NBDY]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711943527
NBDZ01000005
Bacillota
Ligilactobacillus salivarius [NBDZ]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711943575
NBEA01000005
Bacillota
Ligilactobacillus salivarius [NBEA]
274
348
+
Lys
TTT
[ENA]
¡û
>W1711943646
NBEB01000166
Bacillota
Ligilactobacillus salivarius [NBEB]
243
169
-
Lys
TTT
[ENA]
¡û
>W1711943714
NBED01000012
Bacillota
Ligilactobacillus salivarius [NBED]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711943750
NBEE01000007
Bacillota
Ligilactobacillus salivarius [NBEE]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711943879
NBEH01000006
Bacillota
Ligilactobacillus salivarius [NBEH]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711943974
NBEJ01000004
Bacillota
Ligilactobacillus salivarius [NBEJ]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944011
NBEK01000005
Bacillota
Ligilactobacillus salivarius [NBEK]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711944063
NBEL01000004
Bacillota
Ligilactobacillus salivarius [NBEL]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944113
NBEM01000003
Bacillota
Ligilactobacillus salivarius [NBEM]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711944158
NBEN01000003
Bacillota
Ligilactobacillus salivarius [NBEN]
60
134
+
Lys
TTT
[ENA]
¡û
>W1711944210
NBEO01000005
Bacillota
Ligilactobacillus salivarius [NBEO]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944311
NBEQ01000005
Bacillota
Ligilactobacillus salivarius [NBEQ]
219
293
+
Lys
TTT
[ENA]
¡û
>W1711944397
NBER01000066
Bacillota
Ligilactobacillus salivarius [NBER]
417
343
-
Lys
TTT
[ENA]
¡û
>W1711944404
NBES01000008
Bacillota
Ligilactobacillus salivarius [NBES]
78
152
+
Lys
TTT
[ENA]
¡û
>W1711944497
NBEU01000007
Bacillota
Ligilactobacillus salivarius [NBEU]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944583
NBEV01000085
Bacillota
Ligilactobacillus salivarius [NBEV]
199
125
-
Lys
TTT
[ENA]
¡û
>W1711944585
NBEV01000088
Bacillota
Ligilactobacillus salivarius [NBEV]
243
169
-
Lys
TTT
[ENA]
¡û
>W1711944588
NBEW01000012
Bacillota
Ligilactobacillus salivarius [NBEW]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944624
NBEX01000015
Bacillota
Ligilactobacillus salivarius [NBEX]
140
214
+
Lys
TTT
[ENA]
¡û
>W1711944663
NBEY01000013
Bacillota
Ligilactobacillus salivarius [NBEY]
60
134
+
Lys
TTT
[ENA]
¡û
>W1712035977
NFHF01000010
Bacillota
Ligilactobacillus salivarius [NFHF]
44
118
+
Lys
TTT
[ENA]
¡û
>W1712036004
NFHF01000035
Bacillota
Ligilactobacillus salivarius [NFHF]
44
118
+
Lys
TTT
[ENA]
¡û
>W1712036033
NFHF01000068
Bacillota
Ligilactobacillus salivarius [NFHF]
76
2
-
Lys
TTT
[ENA]
¡û
>W1712036895
NFHV01000014
Bacillota
Ligilactobacillus salivarius [NFHV]
44
118
+
Lys
TTT
[ENA]
¡û
>W1712036921
NFHV01000023
Bacillota
Ligilactobacillus salivarius [NFHV]
44
118
+
Lys
TTT
[ENA]
¡û
>W1712036934
NFHV01000044
Bacillota
Ligilactobacillus salivarius [NFHV]
442
516
+
Lys
TTT
[ENA]
¡û
>W1712041942
NFLK01000008
Bacillota
Ligilactobacillus salivarius [NFLK]
3326
3400
+
Lys
TTT
[ENA]
¡û
>W1712041952
NFLK01000009
Bacillota
Ligilactobacillus salivarius [NFLK]
44
118
+
Lys
TTT
[ENA]
¡û
>C171057149
CP017107
Bacillota
Ligilactobacillus salivarius CICC 23174 [CP017107]
279334
279260
-
Lys
TTT
-
¡û
>C171057173
CP017107
Bacillota
Ligilactobacillus salivarius CICC 23174 [CP017107]
72672
72598
-
Lys
TTT
-
¡û
>C171113771
CP020858
Bacillota
Ligilactobacillus salivarius ZLS006 [CP020858]
1609122
1609048
-
Lys
TTT
-
¡û
>C171113794
CP020858
Bacillota
Ligilactobacillus salivarius ZLS006 [CP020858]
1390773
1390699
-
Lys
TTT
-
¡û
>C171128975
LT604074
Bacillota
Ligilactobacillus salivarius [LT604074]
1101323
1101397
+
Lys
TTT
-
¡û
>C171128999
LT604074
Bacillota
Ligilactobacillus salivarius [LT604074]
1357051
1357125
+
Lys
TTT
-
¡û
>C012665
CP000233
Bacillota
Ligilactobacillus salivarius UCC118 [CP000233]
222925
222997
+
Lys
TTT
[Ensembl]
¡û
>C012689
CP000233
Bacillota
Ligilactobacillus salivarius UCC118 [CP000233]
485325
485397
+
Lys
TTT
[Ensembl]
¡û
>WENV180289869
OBIU01000353
[OBIU] human gut metagenome; human gut
21557
21483
-
Lys
TTT
[ENA]
¢þ
>WENV180319834
OBKN01013025
[OBKN] human gut metagenome; human gut
179
253
+
Lys
TTT
[ENA]
¢þ
>WENV180828628
ODKA01016023
[ODKA] human metagenome; G_DNA_Stool
1487
1413
-
Lys
TTT
[ENA]
¢þ
>WENV181239667
OFFD01003197
[OFFD] mouse gut metagenome; faeces
2085
2159
+
Lys
TTT
[ENA]
¢þ
>WENV181240316
OFFE01000799
[OFFE] mouse gut metagenome; faeces
3572
3646
+
Lys
TTT
[ENA]
¢þ
>WENV181242022
OFFF01024371
[OFFF] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181243961
OFFH01004272
[OFFH] mouse gut metagenome; faeces
4910
4836
-
Lys
TTT
[ENA]
¢þ
>WENV181247147
OFFK01006856
[OFFK] mouse gut metagenome; faeces
529
603
+
Lys
TTT
[ENA]
¢þ
>WENV181249512
OFFM01010577
[OFFM] mouse gut metagenome; faeces
1251
1325
+
Lys
TTT
[ENA]
¢þ
>WENV181251558
OFFO01028930
[OFFO] mouse gut metagenome; faeces
276
202
-
Lys
TTT
[ENA]
¢þ
>WENV181256082
OFFT01000220
[OFFT] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181257238
OFFU01000388
[OFFU] mouse gut metagenome; faeces
2085
2159
+
Lys
TTT
[ENA]
¢þ
>WENV181259918
OFFW01006303
[OFFW] mouse gut metagenome; faeces
4910
4836
-
Lys
TTT
[ENA]
¢þ
>WENV181264234
OFGA01000263
[OFGA] mouse gut metagenome; faeces
46720
46646
-
Lys
TTT
[ENA]
¢þ
>WENV181268007
OFGD01000359
[OFGD] mouse gut metagenome; faeces
611
685
+
Lys
TTT
[ENA]
¢þ
>WENV181269216
OFGE01000668
[OFGE] mouse gut metagenome; faeces
35850
35776
-
Lys
TTT
[ENA]
¢þ
>WENV181270572
OFGF01000275
[OFGF] mouse gut metagenome; faeces
3550
3624
+
Lys
TTT
[ENA]
¢þ
>WENV181272238
OFGG01005159
[OFGG] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181275718
OFGJ01029835
[OFGJ] mouse gut metagenome; faeces
608
682
+
Lys
TTT
[ENA]
¢þ
>WENV181278880
OFGM01031831
[OFGM] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181279342
OFGN01000417
[OFGN] mouse gut metagenome; faeces
611
685
+
Lys
TTT
[ENA]
¢þ
>WENV181280847
OFGO01002429
[OFGO] mouse gut metagenome; faeces
3573
3647
+
Lys
TTT
[ENA]
¢þ
>WENV181283441
OFGQ01003671
[OFGQ] mouse gut metagenome; faeces
7129
7055
-
Lys
TTT
[ENA]
¢þ
>WENV181285060
OFGR01027164
[OFGR] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181289935
OFHA01004085
[OFHA] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181298880
OFHM01000275
[OFHM] mouse gut metagenome; faeces
46672
46598
-
Lys
TTT
[ENA]
¢þ
>WENV181302109
OFHO01004259
[OFHO] mouse gut metagenome; faeces
158
232
+
Lys
TTT
[ENA]
¢þ
>WENV181355233
OFMT01000979
[OFMT] human gut metagenome; human gut
59
134
+
Lys
TTT
[ENA]
¢þ
>WENV181398279
OFSD01047593
[OFSD] human gut metagenome; human gut
400
325
-
Lys
TTT
[ENA]
¢þ
>WENV181428796
OGCW01000518
[OGCW] metagenome; Human gut stool
55
129
+
Lys
TTT
[ENA]
¢þ
>WENV181429149
OGCX01000063
[OGCX] metagenome; Human gut stool
72159
72085
-
Lys
TTT
[ENA]
¢þ
>WENV181454490
OGED01003601
[OGED] metagenome; Human gut stool
3201
3127
-
Lys
TTT
[ENA]
¢þ
>WENV181463387
OGEO01002177
[OGEO] metagenome; Human gut stool
9239
9313
+
Lys
TTT
[ENA]
¢þ
>WENV181483091
OGFK01000593
[OGFK] metagenome; Human gut stool
29023
28949
-
Lys
TTT
[ENA]
¢þ
>WENV181484694
OGFL01011673
[OGFL] metagenome; Human gut stool
2181
2107
-
Lys
TTT
[ENA]
¢þ
>WENV181501526
OGGI01000447
[OGGI] metagenome; Human gut stool
42061
41987
-
Lys
TTT
[ENA]
¢þ
>WENV181506200
OGGM01000302
[OGGM] metagenome; Human gut stool
41936
41862
-
Lys
TTT
[ENA]
¢þ
>WENV181519093
OGHB01005494
[OGHB] metagenome; Human gut stool
55
129
+
Lys
TTT
[ENA]
¢þ
>WENV181525574
OGHJ01000442
[OGHJ] metagenome; Human gut stool
63700
63626
-
Lys
TTT
[ENA]
¢þ
>WENV181538735
OGHY01055057
[OGHY] metagenome; Human gut stool
205
279
+
Lys
TTT
[ENA]
¢þ
>WENV181539121
OGHZ01001571
[OGHZ] metagenome; Human gut stool
8526
8452
-
Lys
TTT
[ENA]
¢þ
>WENV181541360
OGIC01021168
[OGIC] metagenome; Human gut stool
736
662
-
Lys
TTT
[ENA]
¢þ
>WENV181573598
OGJR01023492
[OGJR] metagenome; Human gut stool
699
625
-
Lys
TTT
[ENA]
¢þ
>WENV181576068
OGJV01000360
[OGJV] metagenome; Human gut stool
27475
27401
-
Lys
TTT
[ENA]
¢þ
>WENV181582137
OGKB01000598
[OGKB] metagenome; Human gut stool
55
129
+
Lys
TTT
[ENA]
¢þ
>WENV181588648
OGKJ01000370
[OGKJ] metagenome; Human gut stool
771
845
+
Lys
TTT
[ENA]
¢þ
>WENV181589658
OGKM01000012
[OGKM] metagenome; Human gut stool
136
210
+
Lys
TTT
[ENA]
¢þ
>WENV181713951
OGPR01000267
[OGPR] human gut metagenome; faeces
61964
61890
-
Lys
TTT
[ENA]
¢þ
>WENV181736375
OGQH01000328
[OGQH] human gut metagenome; faeces
1259
1333
+
Lys
TTT
[ENA]
¢þ
>WENV181786245
OGRN01001198
[OGRN] human gut metagenome; faeces
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV181973483
OHAA01057397
[OHAA] human gut metagenome; faeces
60
135
+
Lys
TTT
[ENA]
¢þ
>WENV182008954
OHBJ01005462
[OHBJ] human gut metagenome; faeces
7285
7359
+
Lys
TTT
[ENA]
¢þ
>WENV182272476
OHUH01002799
[OHUH] human gut metagenome; feces
147
73
-
Lys
TTT
[ENA]
¢þ
>WENV182276953
OHUQ01000860
[OHUQ] human gut metagenome; feces
214
140
-
Lys
TTT
[ENA]
¢þ
>WENV182291763
OHVZ01021982
[OHVZ] human gut metagenome; feces
273
198
-
Lys
TTT
[ENA]
¢þ
>WENV182295876
OHWG01000055
[OHWG] human gut metagenome; feces
179
253
+
Lys
TTT
[ENA]
¢þ
>W141229225
BAMM01000063
Bacillota
Ligilactobacillus apodemi JCM 16172 [BAMM]
445
371
-
Lys
TTT
[ENA]
¡û
>WENV182344978
OIAM01011436
[OIAM] human gut metagenome; feces
701
626
-
Lys
TTT
[ENA]
¢þ
>WENV182353347
OIBL01002390
[OIBL] human gut metagenome; feces
3576
3650
+
Lys
TTT
[ENA]
¢þ
>WENV182360001
OICB01000045
[OICB] human gut metagenome; feces
75645
75570
-
Lys
TTT
[ENA]
¢þ
>WENV182362473
OICD01037663
[OICD] human gut metagenome; feces
179
253
+
Lys
TTT
[ENA]
¢þ
>WENV182364784
OICH01031840
[OICH] human gut metagenome; feces
47
122
+
Lys
TTT
[ENA]
¢þ
>WENV182370318
OICT01000043
[OICT] human gut metagenome; feces
75645
75570
-
Lys
TTT
[ENA]
¢þ
>WENV182375625
OIDD01000054
[OIDD] human gut metagenome; feces
75839
75765
-
Lys
TTT
[ENA]
¢þ
>WENV182389785
OIED01004115
[OIED] human gut metagenome; feces
806
732
-
Lys
TTT
[ENA]
¢þ
>WENV182404230
OIEU01006848
[OIEU] human gut metagenome; human gut
207
281
+
Lys
TTT
[ENA]
¢þ
>W141256115
CBVR010000004
Bacillota
Ligilactobacillus salivarius cp400 [CBVR]
89479
89405
-
Lys
TTT
[ENA]
¡û
>W141256117
CBVR010000004
Bacillota
Ligilactobacillus salivarius cp400 [CBVR]
89103
89029
-
Lys
TTT
[ENA]
¡û
>W141256163
CBVR010000038
Bacillota
Ligilactobacillus salivarius cp400 [CBVR]
20198
20124
-
Lys
TTT
[ENA]
¡û
>W141256164
CBVR010000038
Bacillota
Ligilactobacillus salivarius cp400 [CBVR]
19991
19917
-
Lys
TTT
[ENA]
¡û
>WENV182927403
OKUM01030207
[OKUM] human gut metagenome; feces
59
134
+
Lys
TTT
[ENA]
¢þ
>WENV182943211
OKVH01041951
[OKVH] human gut metagenome; human gut
598
673
+
Lys
TTT
[ENA]
¢þ
>WENV182954440
OKWA01001270
[OKWA] human gut metagenome; human gut
8976
9050
+
Lys
TTT
[ENA]
¢þ
>WENV183011390
OLDZ01003754
[OLDZ] human gut metagenome; human gut
2338
2412
+
Lys
TTT
[ENA]
¢þ
>WENV183132112
OLOB01000492
[OLOB] human gut metagenome; faeces
31730
31656
-
Lys
TTT
[ENA]
¢þ
>WENV183202769
OLPX01041301
[OLPX] human gut metagenome; faeces
77
3
-
Lys
TTT
[ENA]
¢þ
>WENV183284569
OLSD01030037
[OLSD] human gut metagenome; faeces
1478
1404
-
Lys
TTT
[ENA]
¢þ
>WENV183407423
OMAC01000428
[OMAC] human gut metagenome; feces
134
208
+
Lys
TTT
[ENA]
¢þ
>WENV183427778
OMBN01000414
[OMBN] human gut metagenome; feces
55
129
+
Lys
TTT
[ENA]
¢þ
>WENV183428864
OMBO01000408
[OMBO] human gut metagenome; feces
30000
29926
-
Lys
TTT
[ENA]
¢þ
>WENV183473043
OMER01000429
[OMER] human gut metagenome; feces
55
129
+
Lys
TTT
[ENA]
¢þ
>WENV183493898
OMGJ01009687
[OMGJ] human gut metagenome; human gut
403
477
+
Lys
TTT
[ENA]
¢þ
>WENV183522938
ONZR01012998
[ONZR] human gut metagenome; human gut
103
177
+
Lys
TTT
[ENA]
¢þ
>WENV183553231
OOBK01001432
[OOBK] human gut metagenome; human gut
8564
8638
+
Lys
TTT
[ENA]
¢þ
>WENV183583502
OOCP01040449
[OOCP] human gut metagenome; human gut
602
676
+
Lys
TTT
[ENA]
¢þ
>WENV183606519
OODN01011092
[OODN] human gut metagenome; human gut
580
654
+
Lys
TTT
[ENA]
¢þ
>WENV183657871
OQWI01057065
[OQWI] human gut metagenome; human gut
611
685
+
Lys
TTT
[ENA]
¢þ
>WENV183723477
PDYJ01001869
[PDYJ] gut metagenome; fecal pellets
9864
9938
+
Lys
TTT
[ENA]
¢þ
>C181020769
CP016766
Bacillota
Ligilactobacillus agilis La3 [CP016766]
1152863
1152789
-
Lys
TTT
-
¡û
>C181084719
CP023565
Bacillota
Ligilactobacillus murinus CR147 [CP023565]
2135151
2135225
+
Lys
TTT
-
¡û
>C181084747
CP023565
Bacillota
Ligilactobacillus murinus CR147 [CP023565]
1171885
1171811
-
Lys
TTT
-
¡û
>C181084776
CP023566
Bacillota
Ligilactobacillus murinus CR141 [CP023566]
837469
837543
+
Lys
TTT
-
¡û
>C181084803
CP023566
Bacillota
Ligilactobacillus murinus CR141 [CP023566]
1168805
1168879
+
Lys
TTT
-
¡û
>C181181997
CP029616
Bacillota
Ligilactobacillus salivarius DJ-sa-01 [CP029616]
1202392
1202466
+
Lys
TTT
-
¡û
>C181182021
CP029616
Bacillota
Ligilactobacillus salivarius DJ-sa-01 [CP029616]
1440297
1440371
+
Lys
TTT
-
¡û
>C191015280
CP018176
Bacillota
Liquorilactobacillus hordei TMW 1.1822 [CP018176]
336801
336875
+
Lys
TTT
-
¡û
>C191015315
CP018176
Bacillota
Liquorilactobacillus hordei TMW 1.1822 [CP018176]
1650391
1650317
-
Lys
TTT
-
¡û
>C191172058
CP039849
Bacillota
Ligilactobacillus animalis LL1 [CP039849]
309700
309774
+
Lys
TTT
-
¡û
>C191172085
CP039849
Bacillota
Ligilactobacillus animalis LL1 [CP039849]
638199
638273
+
Lys
TTT
-
¡û
>W09123138
ACGT01000001
Bacillota
Ligilactobacillus salivarius ATCC 11741 [ACGT]
81
155
+
Lys
TTT
[ENA]
¡û
>W09123178
ACGT01000028
Bacillota
Ligilactobacillus salivarius ATCC 11741 [ACGT]
72464
72390
-
Lys
TTT
[ENA]
¡û
>W141699160
JMHU01000019
Bacillota
Ligilactobacillus animalis [JMHU]
284
358
+
Lys
TTT
[ENA]
¡û
>W141699167
JMHU01000021
Bacillota
Ligilactobacillus animalis [JMHU]
106
180
+
Lys
TTT
[ENA]
¡û
>W1910611605
LFJL01000019
Bacillota
Ligilactobacillus animalis 09-2317 [LFJL]
391
465
+
Lys
TTT
[ENA]
¡û
>W1910611656
LFJM01000018
Bacillota
Ligilactobacillus animalis 14-7927 [LFJM]
391
465
+
Lys
TTT
[ENA]
¡û
>W1910642954
LUGD01000066
Bacillota
Ligilactobacillus agilis UMNLA4 [LUGD]
296
370
+
Lys
TTT
[ENA]
¡û
>W1910643051
LUGE01000066
Bacillota
Ligilactobacillus agilis UMNLA5 [LUGE]
100698
100624
-
Lys
TTT
[ENA]
¡û
>W1910643112
LUGO01000030
Bacillota
Ligilactobacillus agilis UMNLA1 [LUGO]
100698
100624
-
Lys
TTT
[ENA]
¡û
>W1910643173
LUGP01000002
Bacillota
Ligilactobacillus agilis UMNLA2 [LUGP]
100697
100623
-
Lys
TTT
[ENA]
¡û
>W1910643268
LUGQ01000052
Bacillota
Ligilactobacillus agilis UMNLA3 [LUGQ]
296
370
+
Lys
TTT
[ENA]
¡û
>W1910649419
LXYX01000144
Bacillota
Ligilactobacillus salivarius KLW010 [LXYX]
24597
24523
-
Lys
TTT
[ENA]
¡û
>W1910649480
LXYY01000026
Bacillota
Ligilactobacillus salivarius KLW009 [LXYY]
173
247
+
Lys
TTT
[ENA]
¡û
>W1910649561
LXZA01000025
Bacillota
Ligilactobacillus salivarius KLW007 [LXZA]
15
89
+
Lys
TTT
[ENA]
¡û
>W1910649570
LXZA01000028
Bacillota
Ligilactobacillus salivarius KLW007 [LXZA]
249
323
+
Lys
TTT
[ENA]
¡û
>W1910649643
LXZB01000075
Bacillota
Ligilactobacillus salivarius KLW006 [LXZB]
1005
931
-
Lys
TTT
[ENA]
¡û
>W1910649674
LXZC01000008
Bacillota
Ligilactobacillus salivarius KLW005 [LXZC]
23994
24068
+
Lys
TTT
[ENA]
¡û
>W1910649724
LXZD01000053
Bacillota
Ligilactobacillus salivarius KLW004 [LXZD]
1546
1472
-
Lys
TTT
[ENA]
¡û
>W1910649766
LXZD01000177
Bacillota
Ligilactobacillus salivarius KLW004 [LXZD]
81
155
+
Lys
TTT
[ENA]
¡û
>W1910649818
LXZE01000172
Bacillota
Ligilactobacillus salivarius KLW003 [LXZE]
16
90
+
Lys
TTT
[ENA]
¡û
>W1910649859
LXZF01000034
Bacillota
Ligilactobacillus salivarius KLW002 [LXZF]
19532
19458
-
Lys
TTT
[ENA]
¡û
>W1910649915
LXZH01000044
Bacillota
Ligilactobacillus salivarius KLF007 [LXZH]
23714
23640
-
Lys
TTT
[ENA]
¡û
>W1910650032
LXZK01000042
Bacillota
Ligilactobacillus salivarius KLF004 [LXZK]
81
155
+
Lys
TTT
[ENA]
¡û
>W1910650071
LXZL01000054
Bacillota
Ligilactobacillus salivarius KLF003 [LXZL]
19414
19340
-
Lys
TTT
[ENA]
¡û
>W1910650140
LXZM01000079
Bacillota
Ligilactobacillus salivarius KLF002 [LXZM]
81
155
+
Lys
TTT
[ENA]
¡û
>W1910650193
LXZO01000098
Bacillota
Ligilactobacillus salivarius KLA006 [LXZO]
23721
23647
-
Lys
TTT
[ENA]
¡û
>W1910650258
LXZP01000096
Bacillota
Ligilactobacillus salivarius KLA005 [LXZP]
173
247
+
Lys
TTT
[ENA]
¡û
>W1910650305
LXZQ01000043
Bacillota
Ligilactobacillus salivarius KLA004 [LXZQ]
23721
23647
-
Lys
TTT
[ENA]
¡û
>W1910650361
LXZR01000041
Bacillota
Ligilactobacillus salivarius KLA003 [LXZR]
23723
23649
-
Lys
TTT
[ENA]
¡û
>W1910650451
LXZT01000006
Bacillota
Ligilactobacillus salivarius KLA001 [LXZT]
276
202
-
Lys
TTT
[ENA]
¡û
>W1910650483
LXZT01000041
Bacillota
Ligilactobacillus salivarius KLA001 [LXZT]
23679
23605
-
Lys
TTT
[ENA]
¡û
>W1910650496
LXZT01000103
Bacillota
Ligilactobacillus salivarius KLA001 [LXZT]
921
847
-
Lys
TTT
[ENA]
¡û
>W1910652401
LYQO01000104
Bacillota
Ligilactobacillus agilis UMNLA6 [LYQO]
296
370
+
Lys
TTT
[ENA]
¡û
>W1910652429
LYQP01000047
Bacillota
Ligilactobacillus agilis UMNLA7 [LYQP]
100697
100623
-
Lys
TTT
[ENA]
¡û
>W1910652558
LYQQ01000059
Bacillota
Ligilactobacillus agilis UMNLA8 [LYQQ]
100697
100623
-
Lys
TTT
[ENA]
¡û
>W1910874517
NDYW01000011
Bacillota
Ligilactobacillus salivarius L28 [NDYW]
333
407
+
Lys
TTT
[ENA]
¡û
>W1910874560
NDYW01000051
Bacillota
Ligilactobacillus salivarius L28 [NDYW]
52
126
+
Lys
TTT
[ENA]
¡û
>W1911569797
PCZA01000031
Bacillota
Lactobacillus sp. UMNPBX9 [PCZA]
19935
19861
-
Lys
TTT
[ENA]
¡û
>W1911570197
PCZH01000035
Bacillota
Lactobacillus sp. UMNPBX2 [PCZH]
19888
19814
-
Lys
TTT
[ENA]
¡û
>W1810070416
PECX01000001
Bacillota
Ligilactobacillus salivarius SGL 03 [PECX]
1556138
1556212
+
Lys
TTT
[ENA]
¡û
>W1810070439
PECX01000001
Bacillota
Ligilactobacillus salivarius SGL 03 [PECX]
1285085
1285011
-
Lys
TTT
[ENA]
¡û
>W1810185940
PKGM01000042
Bacillota
Ligilactobacillus agilis 273 [PKGM]
24
98
+
Lys
TTT
[ENA]
¡û
>W1810225261
POVP01000004
Bacillota
Ligilactobacillus animalis NP51 [POVP]
260307
260233
-
Lys
TTT
[ENA]
¡û
>W1810225303
POVP01000021
Bacillota
Ligilactobacillus animalis NP51 [POVP]
258
184
-
Lys
TTT
[ENA]
¡û
>W1810472357
QAGU01000001
Bacillota
Ligilactobacillus salivarius DS2_12 [QAGU]
208
282
+
Lys
TTT
[ENA]
¡û
>W1810472416
QAGU01000040
Bacillota
Ligilactobacillus salivarius DS2_12 [QAGU]
52
126
+
Lys
TTT
[ENA]
¡û
>W1810472428
QAGV01000001
Bacillota
Ligilactobacillus salivarius DS11_12 [QAGV]
522510
522436
-
Lys
TTT
[ENA]
¡û
>W1810472480
QAGV01000036
Bacillota
Ligilactobacillus salivarius DS11_12 [QAGV]
310
236
-
Lys
TTT
[ENA]
¡û
>W1810488189
QAZF01000001
Bacillota
Ligilactobacillus salivarius DS3_12 [QAZF]
475539
475465
-
Lys
TTT
[ENA]
¡û
>W1810488244
QAZF01000058
Bacillota
Ligilactobacillus salivarius DS3_12 [QAZF]
310
236
-
Lys
TTT
[ENA]
¡û
>W1810488267
QAZG01000006
Bacillota
Ligilactobacillus salivarius DS13_12 [QAZG]
122839
122765
-
Lys
TTT
[ENA]
¡û
>W1810488304
QAZG01000050
Bacillota
Ligilactobacillus salivarius DS13_12 [QAZG]
217
143
-
Lys
TTT
[ENA]
¡û
>W1810584315
QFAS01000004
Bacillota
Ligilactobacillus salivarius A3iob [QFAS]
489
563
+
Lys
TTT
[ENA]
¡û
>W1810584345
QFAS01000006
Bacillota
Ligilactobacillus salivarius A3iob [QFAS]
378
452
+
Lys
TTT
[ENA]
¡û
>C151030895
CP007646
Bacillota
Ligilactobacillus salivarius JCM1046 [CP007646]
245497
245571
+
Lys
TTT
[Ensembl]
¡û
>C151030919
CP007646
Bacillota
Ligilactobacillus salivarius JCM1046 [CP007646]
468994
469068
+
Lys
TTT
[Ensembl]
¡û
>C151082274
CP011403
Bacillota
Ligilactobacillus salivarius str. Ren [CP011403]
222375
222449
+
Lys
TTT
[Ensembl]
¡û
>C151082298
CP011403
Bacillota
Ligilactobacillus salivarius str. Ren [CP011403]
479456
479530
+
Lys
TTT
[Ensembl]
¡û
>C10109011
CP002034
Bacillota
Ligilactobacillus salivarius CECT 5713 [CP002034]
223427
223501
+
Lys
TTT
[Ensembl]
¡û
>C10109035
CP002034
Bacillota
Ligilactobacillus salivarius CECT 5713 [CP002034]
485912
485986
+
Lys
TTT
[Ensembl]
¡û
>W1510650348
CVQY01000016
Bacillota
Ligilactobacillus agilis Marseille [CVQY]
855
781
-
Lys
TTT
[ENA]
¡û
>W11167196
AFMN01000001
Bacillota
Ligilactobacillus salivarius NIAS840 [AFMN]
966141
966215
+
Lys
TTT
[ENA]
¡û
>W11167247
AFMN01000001
Bacillota
Ligilactobacillus salivarius NIAS840 [AFMN]
122677
122603
-
Lys
TTT
[ENA]
¡û
>W11168559
AFOI01000001
Bacillota
Ligilactobacillus salivarius GJ-24 [AFOI]
75041
74967
-
Lys
TTT
[ENA]
¡û
>W11168598
AFOI01000004
Bacillota
Ligilactobacillus salivarius GJ-24 [AFOI]
480766
480692
-
Lys
TTT
[ENA]
¡û
>C121004202
CP003032
Bacillota
Ligilactobacillus ruminis ATCC 27782 [CP003032]
279487
279561
+
Lys
TTT
[Ensembl]
¡û
>C121004238
CP003032
Bacillota
Ligilactobacillus ruminis ATCC 27782 [CP003032]
1504002
1503927
-
Lys
TTT
[Ensembl]
¡û
>W121045100
AICL01000003
Bacillota
Ligilactobacillus salivarius SMXD51 [AICL]
175513
175587
+
Lys
TTT
[ENA]
¡û
>W121045124
AICL01000003
Bacillota
Ligilactobacillus salivarius SMXD51 [AICL]
664041
664115
+
Lys
TTT
[ENA]
¡û
>W1610029408
AWYA01000058
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
948
873
-
Lys
TTT
[ENA]
¡û
>W1610029430
AWYA01000066
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
25233
25159
-
Lys
TTT
[ENA]
¡û
>W1610031065
AYYN01000107
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [AYYN]
76
2
-
Lys
TTT
[ENA]
¡û
>W1610031514
AYYW01000038
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
4729
4655
-
Lys
TTT
[ENA]
¡û
>W1610031545
AYYW01000053
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
368
442
+
Lys
TTT
[ENA]
¡û
>W1610031880
AYZE01000009
Bacillota
Liquorilactobacillus cacaonum DSM 21116 [AYZE]
134
208
+
Lys
TTT
[ENA]
¡û
>W1610031937
AYZF01000010
Bacillota
Liquorilactobacillus sucicola DSM 21376 = JCM 15457 [AYZF]
86
12
-
Lys
TTT
[ENA]
¡û
>W1610034694
AZDX01000132
Bacillota
Liquorilactobacillus hordei DSM 19519 [AZDX]
75
1
-
Lys
TTT
[ENA]
¡û
>W1610035085
AZEF01000046
Bacillota
Liquorilactobacillus capillatus DSM 19910 [AZEF]
134
208
+
Lys
TTT
[ENA]
¡û
>W1610035182
AZEH01000038
Bacillota
Liquorilactobacillus oeni DSM 19972 [AZEH]
140
212
+
Lys
TTT
[ENA]
¡û
>W1610035878
AZEV01000037
Bacillota
Liquorilactobacillus nagelii DSM 13675 [AZEV]
75
1
-
Lys
TTT
[ENA]
¡û
>W1610036458
AZFH01000177
Bacillota
Ligilactobacillus equi DSM 15833 = JCM 10991 [AZFH]
107
181
+
Lys
TTT
[ENA]
¡û
>W1610036869
AZFQ01000042
Bacillota
Liquorilactobacillus satsumensis DSM 16230 = JCM 12392 [AZFQ]
138
210
+
Lys
TTT
[ENA]
¡û
>WENV079379
AATC01000024
Gut microbiome of Mouse lean and obese (C57BL/6J; sample lean3, leptin genotype +/+)
1487
1564
+
Lys
TTT
[ENA]
>WENV079427
AATC01004403
Gut microbiome of Mouse lean and obese (C57BL/6J; sample lean3, leptin genotype +/+)
612
535
-
Lys
TTT
[ENA]
>WENV079451
AATC01005664
Gut microbiome of Mouse lean and obese (C57BL/6J; sample lean3, leptin genotype +/+)
483
406
-
Lys
TTT
[ENA]
>WENV079556
AATF01000050
Gut microbiome of Mouse lean and obese (C57BL/6J)
3643
3720
+
Lys
TTT
[ENA]
>W1710026778
AWYA01000058
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
948
873
-
Lys
TTT
[ENA]
¡û
>W1710026800
AWYA01000066
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
25233
25159
-
Lys
TTT
[ENA]
¡û
>W1710028017
AYYN01000107
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [AYYN]
76
2
-
Lys
TTT
[ENA]
¡û
>W1710028441
AYYW01000038
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
4729
4655
-
Lys
TTT
[ENA]
¡û
>W1710028472
AYYW01000053
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
368
442
+
Lys
TTT
[ENA]
¡û
>W1710028807
AYZE01000009
Bacillota
Liquorilactobacillus cacaonum DSM 21116 [AYZE]
134
208
+
Lys
TTT
[ENA]
¡û
>W1710028864
AYZF01000010
Bacillota
Liquorilactobacillus sucicola DSM 21376 = JCM 15457 [AYZF]
86
12
-
Lys
TTT
[ENA]
¡û
>W1710031821
AZDX01000132
Bacillota
Liquorilactobacillus hordei DSM 19519 [AZDX]
75
1
-
Lys
TTT
[ENA]
¡û
>W1710032212
AZEF01000046
Bacillota
Liquorilactobacillus capillatus DSM 19910 [AZEF]
134
208
+
Lys
TTT
[ENA]
¡û
>W1710032309
AZEH01000038
Bacillota
Liquorilactobacillus oeni DSM 19972 [AZEH]
140
212
+
Lys
TTT
[ENA]
¡û
>W1710032917
AZEV01000037
Bacillota
Liquorilactobacillus nagelii DSM 13675 [AZEV]
75
1
-
Lys
TTT
[ENA]
¡û
>W1710033497
AZFH01000177
Bacillota
Ligilactobacillus equi DSM 15833 = JCM 10991 [AZFH]
107
181
+
Lys
TTT
[ENA]
¡û
>W1710033908
AZFQ01000042
Bacillota
Liquorilactobacillus satsumensis DSM 16230 = JCM 12392 [AZFQ]
138
210
+
Lys
TTT
[ENA]
¡û
>W1710081593
BDFM01000111
Bacillota
Ligilactobacillus murinus [BDFM]
388
314
-
Lys
TTT
[ENA]
¡û
>W1710081597
BDFM01000112
Bacillota
Ligilactobacillus murinus [BDFM]
426
352
-
Lys
TTT
[ENA]
¡û
>W1710562950
FOPI01000007
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [FOPI]
86662
86587
-
Lys
TTT
[ENA]
¡û
>W1710562997
FOPI01000036
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [FOPI]
414
488
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
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(or Accession No.)
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(Sample source for ENV)
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Representative sequence of each cluster
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