This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.459980 (126 seq.)
>WENV180143426
OATX01037398
[OATX] human gut metagenome; faeces
237
163
-
Ile2
CAT
[ENA]
¡û
>WENV180216246
OBAQ01044163
[OBAQ] human gut metagenome; human gut
217
291
+
Ile2
CAT
[ENA]
¡û
>WENV180222434
OBBD01006276
[OBBD] human gut metagenome; human gut
1179
1253
+
Ile2
CAT
[ENA]
¡û
>WENV180223945
OBBI01008280
[OBBI] human gut metagenome; human gut
815
889
+
Ile2
CAT
[ENA]
¡û
>WENV180224572
OBBK01001542
[OBBK] human gut metagenome; human gut
86
12
-
Ile2
CAT
[ENA]
¡û
>WENV180240479
OBDD01000850
[OBDD] human gut metagenome; human gut
3483
3557
+
Ile2
CAT
[ENA]
¡û
>WENV180243612
OBDJ01041950
[OBDJ] human gut metagenome; human gut
438
364
-
Ile2
CAT
[ENA]
¡û
>WENV180286578
OBII01003855
[OBII] human gut metagenome; feces
992
918
-
Ile2
CAT
[ENA]
¡û
>WENV180322593
OBKR01003777
[OBKR] human gut metagenome; feces
8912
8986
+
Ile2
CAT
[ENA]
¡û
>WENV180543831
OCIO01003877
[OCIO] human gut metagenome; human gut
2316
2390
+
Ile2
CAT
[ENA]
¡û
>WENV180548544
OCIX01002211
[OCIX] human gut metagenome; human gut
83
9
-
Ile2
CAT
[ENA]
¡û
>WENV180609237
OCPV01000561
[OCPV] human gut metagenome; human gut
2623
2697
+
Ile2
CAT
[ENA]
¡û
>WENV180623204
OCQE01001848
[OCQE] human gut metagenome; human gut
3236
3310
+
Ile2
CAT
[ENA]
¡û
>WENV180650625
OCSZ01000311
[OCSZ] human gut metagenome; human gut
6670
6744
+
Ile2
CAT
[ENA]
¡û
>WENV181127575
OEFW01006660
[OEFW] human metagenome; G_DNA_Stool
2654
2728
+
Ile2
CAT
[ENA]
¡û
>WENV181419639
OGCN01000280
[OGCN] human gut metagenome; human gut
64907
64981
+
Ile2
CAT
[ENA]
¡û
>WENV181425438
OGCQ01000466
[OGCQ] human gut metagenome; human gut
63093
63167
+
Ile2
CAT
[ENA]
¡û
>WENV181482024
OGFJ01000544
[OGFJ] metagenome; Human gut stool
8973
9047
+
Ile2
CAT
[ENA]
¡û
>WENV181528424
OGHL01000380
[OGHL] metagenome; Human gut stool
8907
8981
+
Ile2
CAT
[ENA]
¡û
>WENV181598905
OGLB01009670
[OGLB] metagenome; Human gut stool
1367
1293
-
Ile2
CAT
[ENA]
¡û
>WENV181640549
OGNF01000103
[OGNF] metagenome; Human gut stool
64740
64814
+
Ile2
CAT
[ENA]
¡û
>WENV181650533
OGNU01005406
[OGNU] metagenome; Human gut stool
1428
1354
-
Ile2
CAT
[ENA]
¡û
>WENV181651708
OGNV01037438
[OGNV] metagenome; Human gut stool
307
381
+
Ile2
CAT
[ENA]
¡û
>WENV181775169
OGRF01001058
[OGRF] human gut metagenome; faeces
19524
19598
+
Ile2
CAT
[ENA]
¡û
>WENV181829542
OGUN01026672
[OGUN] human gut metagenome; faeces
638
564
-
Ile2
CAT
[ENA]
¡û
>WENV181859213
OGWQ01000403
[OGWQ] human gut metagenome; faeces
8858
8932
+
Ile2
CAT
[ENA]
¡û
>WENV181910482
OGYC01013197
[OGYC] human gut metagenome; faeces
622
548
-
Ile2
CAT
[ENA]
¡û
>WENV181947471
OGZD01006119
[OGZD] human gut metagenome; faeces
4292
4218
-
Ile2
CAT
[ENA]
¡û
>WENV181987822
OHAN01001205
[OHAN] human gut metagenome; faeces
19082
19008
-
Ile2
CAT
[ENA]
¡û
>WENV181988915
OHAO01001303
[OHAO] human gut metagenome; faeces
10866
10792
-
Ile2
CAT
[ENA]
¡û
>WENV182006543
OHBF01006317
[OHBF] human gut metagenome; feces
1800
1874
+
Ile2
CAT
[ENA]
¡û
>WENV182032195
OHCU01000614
[OHCU] human gut metagenome; feces
5478
5404
-
Ile2
CAT
[ENA]
¡û
>WENV182039702
OHDG01001498
[OHDG] human gut metagenome; feces
8834
8908
+
Ile2
CAT
[ENA]
¡û
>WENV182052591
OHEH01010142
[OHEH] human gut metagenome; feces
1082
1156
+
Ile2
CAT
[ENA]
¡û
>WENV182056715
OHEN01003094
[OHEN] human gut metagenome; feces
2140
2214
+
Ile2
CAT
[ENA]
¡û
>WENV182057463
OHEO01014746
[OHEO] human gut metagenome; feces
875
949
+
Ile2
CAT
[ENA]
¡û
>WENV182057875
OHEP01000695
[OHEP] human gut metagenome; feces
8996
9070
+
Ile2
CAT
[ENA]
¡û
>WENV182068705
OHFG01001520
[OHFG] human gut metagenome; feces
7346
7272
-
Ile2
CAT
[ENA]
¡û
>WENV182071153
OHFL01003243
[OHFL] human gut metagenome; feces
3041
2967
-
Ile2
CAT
[ENA]
¡û
>WENV182071924
OHFM01002139
[OHFM] human gut metagenome; feces
2924
2998
+
Ile2
CAT
[ENA]
¡û
>WENV182081474
OHGK01000791
[OHGK] human gut metagenome; feces
9117
9191
+
Ile2
CAT
[ENA]
¡û
>WENV182087716
OHGW01023659
[OHGW] human gut metagenome; feces
686
760
+
Ile2
CAT
[ENA]
¡û
>WENV182089053
OHGZ01001101
[OHGZ] human gut metagenome; feces
8959
9033
+
Ile2
CAT
[ENA]
¡û
>WENV182099949
OHHR01055208
[OHHR] human gut metagenome; feces
436
510
+
Ile2
CAT
[ENA]
¡û
>WENV182102315
OHHU01046310
[OHHU] human gut metagenome; feces
549
475
-
Ile2
CAT
[ENA]
¡û
>WENV182110993
OHIR01001198
[OHIR] human gut metagenome; feces
11563
11489
-
Ile2
CAT
[ENA]
¡û
>WENV182129280
OHJZ01001915
[OHJZ] human gut metagenome; feces
751
825
+
Ile2
CAT
[ENA]
¡û
>WENV182147189
OHLB01001893
[OHLB] human gut metagenome; feces
3610
3684
+
Ile2
CAT
[ENA]
¡û
>WENV182156902
OHLV01017574
[OHLV] human gut metagenome; feces
475
401
-
Ile2
CAT
[ENA]
¡û
>WENV182157736
OHLX01014426
[OHLX] human gut metagenome; feces
422
348
-
Ile2
CAT
[ENA]
¡û
>WENV182167632
OHMS01000850
[OHMS] human gut metagenome; feces
3804
3878
+
Ile2
CAT
[ENA]
¡û
>WENV182177054
OHNJ01008450
[OHNJ] human gut metagenome; feces
292
366
+
Ile2
CAT
[ENA]
¡û
>WENV182179725
OHNN01003384
[OHNN] human gut metagenome; feces
613
539
-
Ile2
CAT
[ENA]
¡û
>WENV182183338
OHNX01001335
[OHNX] human gut metagenome; feces
1212
1138
-
Ile2
CAT
[ENA]
¡û
>WENV182192508
OHOZ01014406
[OHOZ] human gut metagenome; feces
1216
1142
-
Ile2
CAT
[ENA]
¡û
>WENV182193340
OHPB01002739
[OHPB] human gut metagenome; feces
2807
2881
+
Ile2
CAT
[ENA]
¡û
>WENV182209432
OHPZ01024304
[OHPZ] human gut metagenome; feces
429
355
-
Ile2
CAT
[ENA]
¡û
>WENV182217039
OHQO01000922
[OHQO] human gut metagenome; feces
3023
2949
-
Ile2
CAT
[ENA]
¡û
>WENV182218528
OHQQ01000933
[OHQQ] human gut metagenome; feces
3502
3576
+
Ile2
CAT
[ENA]
¡û
>WENV182219507
OHQR01002238
[OHQR] human gut metagenome; feces
4013
4087
+
Ile2
CAT
[ENA]
¡û
>WENV182221811
OHQT01011548
[OHQT] human gut metagenome; feces
1351
1277
-
Ile2
CAT
[ENA]
¡û
>WENV182222388
OHQX01002887
[OHQX] human gut metagenome; feces
2773
2847
+
Ile2
CAT
[ENA]
¡û
>WENV182232098
OHRN01001112
[OHRN] human gut metagenome; feces
4762
4688
-
Ile2
CAT
[ENA]
¡û
>WENV182234971
OHRS01001650
[OHRS] human gut metagenome; feces
7372
7298
-
Ile2
CAT
[ENA]
¡û
>WENV182238725
OHRZ01023465
[OHRZ] human gut metagenome; feces
557
483
-
Ile2
CAT
[ENA]
¡û
>WENV182239170
OHSA01005620
[OHSA] human gut metagenome; feces
1364
1438
+
Ile2
CAT
[ENA]
¡û
>WENV182244694
OHSJ01002526
[OHSJ] human gut metagenome; feces
390
316
-
Ile2
CAT
[ENA]
¡û
>WENV182251096
OHST01004780
[OHST] human gut metagenome; feces
428
354
-
Ile2
CAT
[ENA]
¡û
>WENV182256942
OHTF01000653
[OHTF] human gut metagenome; feces
2499
2425
-
Ile2
CAT
[ENA]
¡û
>WENV182265549
OHTW01003901
[OHTW] human gut metagenome; feces
2489
2563
+
Ile2
CAT
[ENA]
¡û
>WENV182266629
OHTY01028743
[OHTY] human gut metagenome; feces
197
271
+
Ile2
CAT
[ENA]
¡û
>WENV182341874
OIAG01006873
[OIAG] human gut metagenome; feces
1599
1673
+
Ile2
CAT
[ENA]
¡û
>WENV182372238
OICV01011922
[OICV] human gut metagenome; feces
269
195
-
Ile2
CAT
[ENA]
¡û
>WENV182374163
OIDA01015070
[OIDA] human gut metagenome; feces
444
370
-
Ile2
CAT
[ENA]
¡û
>WENV182380525
OIDP01000554
[OIDP] human gut metagenome; feces
6761
6687
-
Ile2
CAT
[ENA]
¡û
>WENV182392591
OIEG01052746
[OIEG] human gut metagenome; human gut
409
335
-
Ile2
CAT
[ENA]
¡û
>WENV182446541
OILA01003717
[OILA] human gut metagenome; human gut
870
944
+
Ile2
CAT
[ENA]
¡û
>WENV182449605
OILS01004703
[OILS] human gut metagenome; human gut
519
445
-
Ile2
CAT
[ENA]
¡û
>WENV182450061
OILT01016897
[OILT] human gut metagenome; human gut
263
189
-
Ile2
CAT
[ENA]
¡û
>WENV182462125
OINX01004453
[OINX] human gut metagenome; human gut
404
330
-
Ile2
CAT
[ENA]
¡û
>WENV182462563
OINY01008521
[OINY] human gut metagenome; human gut
734
808
+
Ile2
CAT
[ENA]
¡û
>WENV182468557
OIOY01011577
[OIOY] human gut metagenome; human gut
482
408
-
Ile2
CAT
[ENA]
¡û
>WENV182647438
OJME01002713
[OJME] human gut metagenome; feces
8881
8955
+
Ile2
CAT
[ENA]
¡û
>WENV182653706
OJMI01000523
[OJMI] human gut metagenome; feces
42211
42137
-
Ile2
CAT
[ENA]
¡û
>WENV182656403
OJMJ01006253
[OJMJ] human gut metagenome; feces
2626
2700
+
Ile2
CAT
[ENA]
¡û
>WENV182675142
OJNQ01001921
[OJNQ] human gut metagenome; feces
2605
2679
+
Ile2
CAT
[ENA]
¡û
>WENV182686208
OJNZ01002713
[OJNZ] human gut metagenome; human gut
3000
2926
-
Ile2
CAT
[ENA]
¡û
>WENV182687617
OJOA01004781
[OJOA] human gut metagenome; human gut
3538
3612
+
Ile2
CAT
[ENA]
¡û
>WENV182721728
OJPP01001742
[OJPP] human gut metagenome; stool sample
1879
1805
-
Ile2
CAT
[ENA]
¡û
>WENV182737566
OJQI01010542
[OJQI] human gut metagenome; stool sample
1421
1347
-
Ile2
CAT
[ENA]
¡û
>WENV182743460
OJQQ01000839
[OJQQ] human gut metagenome; stool sample
1289
1215
-
Ile2
CAT
[ENA]
¡û
>WENV182760706
OJRL01000869
[OJRL] human gut metagenome; stool sample
5680
5606
-
Ile2
CAT
[ENA]
¡û
>WENV182870322
OKRU01000732
[OKRU] human gut metagenome; faeces
8879
8953
+
Ile2
CAT
[ENA]
¡û
>WENV182882583
OKSB01000821
[OKSB] human gut metagenome; faeces
24144
24070
-
Ile2
CAT
[ENA]
¡û
>WENV182890812
OKSG01005947
[OKSG] human gut metagenome; feces
107
33
-
Ile2
CAT
[ENA]
¡û
>WENV182898007
OKSP01034551
[OKSP] human gut metagenome; feces
95
169
+
Ile2
CAT
[ENA]
¡û
>WENV182899827
OKST01001488
[OKST] human gut metagenome; feces
1866
1792
-
Ile2
CAT
[ENA]
¡û
>WENV182901779
OKSV01023140
[OKSV] human gut metagenome; feces
390
316
-
Ile2
CAT
[ENA]
¡û
>WENV182913336
OKTN01010773
[OKTN] human gut metagenome; feces
490
416
-
Ile2
CAT
[ENA]
¡û
>WENV182940652
OKVF01057166
[OKVF] human gut metagenome; human gut
95
169
+
Ile2
CAT
[ENA]
¡û
>WENV182956058
OKWE01000690
[OKWE] human gut metagenome; human gut
3969
4043
+
Ile2
CAT
[ENA]
¡û
>WENV182967856
OKXB01000349
[OKXB] human gut metagenome; human gut
29940
29866
-
Ile2
CAT
[ENA]
¡û
>WENV183006184
OLDD01003576
[OLDD] human gut metagenome; human gut
819
745
-
Ile2
CAT
[ENA]
¡û
>WENV183073843
OLIU01001817
[OLIU] human gut metagenome; stool sample
1926
2000
+
Ile2
CAT
[ENA]
¡û
>WENV183078389
OLIX01001456
[OLIX] human gut metagenome; feces
10579
10653
+
Ile2
CAT
[ENA]
¡û
>WENV183083210
OLJB01027722
[OLJB] human gut metagenome; human gut
847
773
-
Ile2
CAT
[ENA]
¡û
>WENV183276005
OLRZ01001193
[OLRZ] human gut metagenome; faeces
9421
9347
-
Ile2
CAT
[ENA]
¡û
>WENV183354903
OLXC01019403
[OLXC] human gut metagenome; feces
1385
1311
-
Ile2
CAT
[ENA]
¡û
>WENV183358239
OLXG01025418
[OLXG] human gut metagenome; feces
862
936
+
Ile2
CAT
[ENA]
¡û
>WENV183361798
OLXK01000609
[OLXK] human gut metagenome; feces
8860
8934
+
Ile2
CAT
[ENA]
¡û
>WENV183392974
OLZF01000217
[OLZF] human gut metagenome; feces
12002
11928
-
Ile2
CAT
[ENA]
¡û
>WENV183404024
OLZW01003351
[OLZW] human gut metagenome; feces
7879
7953
+
Ile2
CAT
[ENA]
¡û
>WENV183411701
OMAL01001207
[OMAL] human gut metagenome; feces
2804
2730
-
Ile2
CAT
[ENA]
¡û
>WENV183430003
OMBP01002385
[OMBP] human gut metagenome; feces
3299
3373
+
Ile2
CAT
[ENA]
¡û
>WENV183449644
OMCU01002158
[OMCU] human gut metagenome; feces
3607
3681
+
Ile2
CAT
[ENA]
¡û
>WENV183474870
OMEV01000982
[OMEV] human gut metagenome; feces
10742
10668
-
Ile2
CAT
[ENA]
¡û
>WENV183475990
OMEW01005062
[OMEW] human gut metagenome; feces
2785
2711
-
Ile2
CAT
[ENA]
¡û
>WENV183483492
OMFN01005786
[OMFN] human gut metagenome; feces
1770
1844
+
Ile2
CAT
[ENA]
¡û
>WENV183500088
OMGQ01001543
[OMGQ] human gut metagenome; human gut
4966
4892
-
Ile2
CAT
[ENA]
¡û
>WENV183518478
OMNQ01007400
[OMNQ] human gut metagenome; feces
1242
1316
+
Ile2
CAT
[ENA]
¡û
>WENV183531764
OOAC01005359
[OOAC] human gut metagenome; human gut
1400
1326
-
Ile2
CAT
[ENA]
¡û
>WENV183532582
OOAD01002270
[OOAD] human gut metagenome; human gut
7764
7838
+
Ile2
CAT
[ENA]
¡û
>WENV183588962
OOCV01029317
[OOCV] human gut metagenome; human gut
606
680
+
Ile2
CAT
[ENA]
¡û
>WENV183638511
OQVI01000063
[OQVI] human gut metagenome; human gut
24174
24100
-
Ile2
CAT
[ENA]
¡û
>WENV170053003
CDZD01000840
[CDZD] gut metagenome; human stools
419
345
-
Met
CAT
[ENA]
¡û
>WENV170055361
CDZF01003578
[CDZF] gut metagenome; human stools
11937
11863
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK