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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.464631 (6 seq.)
>W143017228
JNKX01000011
Bacteroidota
Bacteroides sp. Ga6A2 [JNKX]
12082
12157
+
Gly
GCC
[ENA]
¡û
>W143017229
JNKX01000011
Bacteroidota
Bacteroides sp. Ga6A2 [JNKX]
12374
12447
+
Gly
GCC
[ENA]
¡û
>W143017231
JNKX01000035
Bacteroidota
Bacteroides sp. Ga6A2 [JNKX]
30453
30528
+
Gly
GCC
[ENA]
¡û
>W143017237
JNLA01000011
Bacteroidota
Bacteroides sp. Ga6A1 [JNLA]
12082
12157
+
Gly
GCC
[ENA]
¡û
>W143017238
JNLA01000011
Bacteroidota
Bacteroides sp. Ga6A1 [JNLA]
12374
12447
+
Gly
GCC
[ENA]
¡û
>W143017240
JNLA01000037
Bacteroidota
Bacteroides sp. Ga6A1 [JNLA]
13518
13443
-
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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