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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.47093 (4 seq.)
>C191162694
CP038865
Bacillota
Vagococcus xieshaowenii personal::cf-49 [CP038865]
285185
285274
+
Ser
GCT
-
¡û
>W1910899878
NGKA01000013
Bacillota
Vagococcus elongatus CCUG 51432 [NGKA]
1382
1471
+
Ser
GCT
[ENA]
¡û
>W2010958779
NGKA01000013
Bacillota
Vagococcus elongatus CCUG 51432 [NGKA]
1382
1471
+
Ser
GCT
[ENA]
¡û
>W2011676751
SRHU01000014
Bacillota
Vagococcus sp. CF-210 [SRHU]
24190
24101
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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