tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.477082 (55 seq.)
>W131046010 AMSA01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 108401 108326 - Lys CTT [ENA] ¡û
>W131046011 AMSA01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 108254 108179 - Lys CTT [ENA] ¡û
>W131046052 AMSB01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 117370 117295 - Lys CTT [ENA] ¡û
>W131046053 AMSB01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 117223 117148 - Lys CTT [ENA] ¡û
>W131062284 ANJR01000020 Betaproteobacteria Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] 23874 23949 + Lys CTT [ENA] ¡û
>W131220901 ATZZ01000008 Betaproteobacteria Chitinimonas koreensis DSM 17726 [ATZZ] 60499 60424 - Lys CTT [ENA] ¡û
>W1711430719 MIJG01000006 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 600016 599941 - Lys CTT [ENA] ¡û
>W1711430720 MIJG01000006 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 599866 599791 - Lys CTT [ENA] ¡û
>W1711765145 MUXB01000183 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 8510 8435 - Lys CTT [ENA] ¡û
>W1711765146 MUXB01000183 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 8363 8288 - Lys CTT [ENA] ¡û
>W1712110315 NJGV01000004 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 210565 210490 - Lys CTT [ENA] ¡û
>C171021243 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 2004042 2003967 - Lys CTT - ¡û
>C171021244 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 2003892 2003817 - Lys CTT - ¡û
>W141003846 AEEC02000053 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 20459 20534 + Lys CTT [ENA] ¡û
>W141003847 AEEC02000053 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 20606 20681 + Lys CTT [ENA] ¡û
>W141223413 BADF01000770 Betaproteobacteria Herbaspirillum sp. B39 [BADF] 241 166 - Lys CTT [ENA] ¡û
>W141223516 BADI01001181 Betaproteobacteria Herbaspirillum sp. B65 [BADI] 2357 2282 - Lys CTT [ENA] ¡û
>WENV183727327 PJTO01028630 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 520 445 - Lys CTT [ENA] ¢þ
>WENV183727328 PJTO01028630 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 373 298 - Lys CTT [ENA] ¢þ
>WENV183727844 PJTP01001145 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 2771 2696 - Lys CTT [ENA] ¢þ
>WENV183727998 PJTP01014040 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 670 745 + Lys CTT [ENA] ¢þ
>WENV183730169 PJTR01001950 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 782 707 - Lys CTT [ENA] ¢þ
>WENV183735087 PJUA01000830 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 7322 7397 + Lys CTT [ENA] ¢þ
>WENV183735798 PJUB01002787 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 1874 1949 + Lys CTT [ENA] ¢þ
>WENV183736655 PJUC01035507 [PJUC] soil metagenome; Soil enriched on filter paper 268 343 + Lys CTT [ENA] ¢þ
>WENV183738064 PJUD01074665 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 521 596 + Lys CTT [ENA] ¢þ
>WENV183738065 PJUD01074665 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 668 743 + Lys CTT [ENA] ¢þ
>WENV183739416 PJUE01014777 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 84 159 + Lys CTT [ENA] ¢þ
>WENV183743721 PJUJ01030277 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 274 349 + Lys CTT [ENA] ¢þ
>WENV183744460 PJUK01034329 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 211 286 + Lys CTT [ENA] ¢þ
>ENV08001474 ABND01004155 fish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease 2 77 + Lys CTT [ENA] ¡û
>WENV170201355 CEPQ01014886 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 193 118 - Lys CTT [ENA] ¢þ
>C191029374 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 1956551 1956476 - Lys CTT - ¡û
>C191029375 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 1956405 1956330 - Lys CTT - ¡û
>C191124271 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 1882758 1882683 - Lys CTT - ¡û
>C191156661 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 2030354 2030279 - Lys CTT - ¡û
>C191156662 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 2030206 2030131 - Lys CTT - ¡û
>W1910577871 JUGD01000026 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 109893 109818 - Lys CTT [ENA] ¡û
>W1910577872 JUGD01000026 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 109746 109671 - Lys CTT [ENA] ¡û
>W1910578284 JWJC01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 108400 108325 - Lys CTT [ENA] ¡û
>W1910578285 JWJC01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 108253 108178 - Lys CTT [ENA] ¡û
>SRA1001557 SRR001071.16357 Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000159) 2 77 + Lys CTT [SRA]
>W1810194063 PKOI01000021 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 71129 71204 + Lys CTT [ENA] ¡û
>C151087606 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 2023725 2023650 - Lys CTT [Ensembl] ¡û
>C151087607 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 2023575 2023500 - Lys CTT [Ensembl] ¡û
>C10107839 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 2023965 2023890 - Lys CTT [Ensembl] ¡û
>C10107840 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 2023815 2023740 - Lys CTT [Ensembl] ¡û
>C161060479 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 1930563 1930488 - Lys CTT [Ensembl] ¡û
>C161060480 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 1930417 1930342 - Lys CTT [Ensembl] ¡û
>W1610071840 BCUJ01000009 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 78061 78136 + Lys CTT [ENA] ¡û
>W1610071841 BCUJ01000009 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 78207 78282 + Lys CTT [ENA] ¡û
>W121068716 AJVC01000003 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 519810 519735 - Lys CTT [ENA] ¡û
>W121068717 AJVC01000003 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 519663 519588 - Lys CTT [ENA] ¡û
>W1710069042 BCUJ01000009 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 78061 78136 + Lys CTT [ENA] ¡û
>W1710069043 BCUJ01000009 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 78207 78282 + Lys CTT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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